FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAAS (Enolase OS=Staphylococcus aureus (strain MSSA476) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAAR (Enolase OS=Staphylococcus aureus (strain MRSA252) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAAN (Enolase OS=Staphylococcus aureus (strain N315) GN=eno PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAAM (Enolase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=eno PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAAE (Enolase OS=Staphylococcus aureus (strain Newman) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAAC (Enolase OS=Staphylococcus aureus (strain COL) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAAB (Enolase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAA9 (Enolase OS=Staphylococcus aureus (strain JH9) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAA8 (Enolase OS=Staphylococcus aureus (strain NCTC 8325) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
[Close]
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAA3 (Enolase OS=Staphylococcus aureus (strain USA300) GN=eno PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 107/203 (52.71%), Postives = 143/203 (70.44%), Query Frame = 2 
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S YLGKGV+KAV NVN II P +   + +  +Q +ID  M+  LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILPVGA+ F+E+++ G E++H+LK+++ +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVENVNEIIAPEIIEGEFSVLDQVSIDKMMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPVGATTFKESLRWGTEIFHNLKSILSK 197
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_STAAS4.714e-4952.71Enolase OS=Staphylococcus aureus (strain MSSA476) ... [more]
ENO_STAAR4.714e-4952.71Enolase OS=Staphylococcus aureus (strain MRSA252) ... [more]
ENO_STAAN4.714e-4952.71Enolase OS=Staphylococcus aureus (strain N315) GN=... [more]
ENO_STAAM4.714e-4952.71Enolase OS=Staphylococcus aureus (strain Mu50 / AT... [more]
ENO_STAAE4.714e-4952.71Enolase OS=Staphylococcus aureus (strain Newman) G... [more]
ENO_STAAC4.714e-4952.71Enolase OS=Staphylococcus aureus (strain COL) GN=e... [more]
ENO_STAAB4.714e-4952.71Enolase OS=Staphylococcus aureus (strain bovine RF... [more]
ENO_STAA94.714e-4952.71Enolase OS=Staphylococcus aureus (strain JH9) GN=e... [more]
ENO_STAA84.714e-4952.71Enolase OS=Staphylococcus aureus (strain NCTC 8325... [more]
ENO_STAA34.714e-4952.71Enolase OS=Staphylococcus aureus (strain USA300) G... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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