FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ROSCS (Enolase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 108/200 (54.00%), Postives = 132/200 (66.00%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TI A+ AR++ DSRGNPT+EVDV    G + RA VPSGASTG +EALELRDG  S Y GKGV KAV NVN  I  AL G+D  +Q  ID  ++  LDG  N     K +LGANAIL VSLA  KA A    +PLY+++  +  +   VLPVP  N++NGG HA N    QEFMI+PVGA  F+EA++ G E+Y  LK VI
Sbjct:    5 TIEAITAREVLDSRGNPTIEVDVYLESGDMGRAIVPSGASTGAFEALELRDGDKSRYGGKGVLKAVENVNTTIAEALEGEDAADQMRIDRMLI-DLDGAEN-----KGRLGANAILGVSLACAKAAAAAHGLPLYRYLGGIHAH---VLPVPMMNILNGGKHAQNSTDFQEFMIMPVGAPSFREALRWGSEIYQSLKKVI 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_METSB (Enolase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 111/201 (55.22%), Postives = 135/201 (67.16%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  + AR+I DSRGNPTVEVDVT  DG   RAAVPSGASTG +EA+ELRDG  S Y GKGV KA+ NVN  I  AL+G +  +Q  ID  M+  LDGT N     K KLGANAIL VSLA+ KA A    +PLY+++  +  +   VLPVP  N+INGG HA N +  QEFMILPVGA    EA++ G EV+  LK+ +K+
Sbjct:    4 IIDIAAREILDSRGNPTVEVDVTLEDGSHGRAAVPSGASTGAHEAVELRDGDKSRYGGKGVLKAIENVNRDIFEALSGLEAEDQGRIDEIMI-SLDGTPN-----KSKLGANAILGVSLAVAKAAADASALPLYRYVGGVQAH---VLPVPMMNIINGGVHADNPIDFQEFMILPVGAPSIAEAVRWGSEVFQLLKSSLKK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_LARHH (Enolase OS=Laribacter hongkongensis (strain HLHK9) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 113/199 (56.78%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAV 685
            +I  V AR+I DSRGNPTVE DV    G + RAAVPSGASTG  EALELRDG +  YLGKGV KAV +VN  I  AL G DPT+Q  ID  +++ LDGT N     K  LGANAILAVS+A+ KA A    +PLY++   L G+  + LPVP  NVINGG+HA N L +QEFMI+PVGA  F+EA++ G E++H LK +
Sbjct:    3 SIVDVIAREILDSRGNPTVECDVWLDSGVMGRAAVPSGASTGEKEALELRDGDARRYLGKGVLKAVEHVNNEICEALIGLDPTDQAYIDQTLLE-LDGTDN-----KGSLGANAILAVSVAVAKAAALEVGLPLYRY---LGGSGPMSLPVPMMNVINGGAHANNTLDIQEFMIMPVGARSFREALRCGAEIFHTLKKI 192          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_HAHCH (Enolase OS=Hahella chejuensis (strain KCTC 2396) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 106/200 (53.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V+AR++ DSRGNPTVE DV    G V  A  PSGASTG  EALELRD   + Y+GKGV KAV  VN  I  AL G+D  EQ  +D  M+  LDGT N     K  LGANAILAVSLA  KA A  K +PLY HIA+++G      +PVP  N++NGG HA N + +QEFM+ PVG + F+EA+++G E++H+LK V+
Sbjct:    4 IVDVRAREVLDSRGNPTVEADVVLKSGVVGSACAPSGASTGSREALELRDKDPARYMGKGVLKAVDAVNTSIRSALIGRDAREQRELDRIMID-LDGTEN-----KANLGANAILAVSLAAAKAAAQEKGVPLYAHIADINGTSGQYSMPVPMMNILNGGEHADNNVDIQEFMVQPVGVASFREALRVGAEIFHNLKKVL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_GEOMG (Enolase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 110/200 (55.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR+I DSRGNPT+EV+V    G + RAAVPSGASTG  EALELRDG  S YLGKGV KAV NVN II   + G + T+Q  ID  M+  LDGT       K  LGANAIL VSLA+ KA A    +PLY++I    G+    LP+P  N++NGG+HA N + +QEFMI+P GA  F EA++MG E++H LK V+K
Sbjct:    4 ITDVYAREILDSRGNPTLEVEVFLESGVMGRAAVPSGASTGEREALELRDGDKSRYLGKGVLKAVDNVNNIIAEQIIGMEATDQIGIDQRMLD-LDGTEY-----KSNLGANAILGVSLAVAKAAAEEVGLPLYQYIG---GSNAKELPLPMMNILNGGAHADNNVDIQEFMIMPAGAKSFAEALRMGAEIFHALKGVLK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_FRAAA (Enolase OS=Frankia alni (strain ACN14a) GN=eno PE=3 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 106/200 (53.00%), Postives = 136/200 (68.00%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            +I AV AR+I DSRGNPTVEV+V   DG + RAAVPSGASTG +EA+ELRDG   Y GKGV KAV+ V   IGPA+   + TEQ  +D  ++  LDGT       K  LGANA+L VSLA+ KA A    +PL+++   L G    +LPVP  N++NGG+HA   + +QEFMI P+GAS F E+++ G EVYH LK+V+K
Sbjct:    3 SIEAVGAREILDSRGNPTVEVEVVLEDGTLGRAAVPSGASTGAFEAVELRDGEDRYGGKGVRKAVAAVIERIGPAIIELEATEQRLLDQTLI-DLDGTPG-----KSALGANALLGVSLAVAKAAAAASGLPLFRY---LGGPSAHLLPVPMLNILNGGAHADTNVDIQEFMIAPIGASSFSESLRWGAEVYHALKSVLK 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_EDWI9 (Enolase OS=Edwardsiella ictaluri (strain 93-146) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 112/201 (55.72%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAVS VN  I   + GKD  +Q  ID  M++ LDGT N     K K GANAILAVSLA  KA A  K +PLY HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA   +EA+++G EV+H+L  V+K
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVSAVNGPIAEVIIGKDAKDQANIDQIMIE-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRIGSEVFHNLAKVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_DESVV (Enolase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 107/200 (53.50%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TI +V AR+I DSRGNPT+EV+V+   GH  RAAVPSGASTG  EALELRDG    Y GKGV KAV NV   I  A+ G D   Q  +DN ++  LDGT N     K++LGANA+L VSLA  +A +    +PLY++   L G    VLPVP  N+INGG+HA N L +QEFMI+P+GA+ F++A++MG E +H LKA++
Sbjct:    3 TIVSVWAREILDSRGNPTIEVEVSLESGHSGRAAVPSGASTGTREALELRDGDKGRYKGKGVEKAVDNVMGEIAEAVIGLDALRQVQLDNTLL-DLDGTDN-----KERLGANAMLGVSLATARAASSFLGLPLYQY---LGGVNAKVLPVPLMNIINGGAHAPNNLDIQEFMIMPIGAATFRDALRMGAETFHTLKALL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_DESVH (Enolase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 107/200 (53.50%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            TI +V AR+I DSRGNPT+EV+V+   GH  RAAVPSGASTG  EALELRDG    Y GKGV KAV NV   I  A+ G D   Q  +DN ++  LDGT N     K++LGANA+L VSLA  +A +    +PLY++   L G    VLPVP  N+INGG+HA N L +QEFMI+P+GA+ F++A++MG E +H LKA++
Sbjct:    3 TIVSVWAREILDSRGNPTIEVEVSLESGHSGRAAVPSGASTGTREALELRDGDKGRYKGKGVEKAVDNVMGEIAEAVIGLDALRQVQLDNTLL-DLDGTDN-----KERLGANAMLGVSLATARAASSFLGLPLYQY---LGGVNAKVLPVPLMNIINGGAHAPNNLDIQEFMIMPIGAATFRDALRMGAETFHTLKALL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_CLOCE (Enolase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 107/204 (52.45%), Postives = 138/204 (67.65%), Query Frame = 2
Query:   80 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            K  I I +V AR+I DSRGNPTVEV+V    G + RA+VPSGASTG +EA+ELRD  S  Y+GKGV  AV NVN  I P + G +  +Q A+D  M+  LDGT N     K++LGANAIL VSLA+ KA A    + LY++I  ++      LPVP  N+INGG HA N + +QEFMI+PVGA  F+EA++M  EV+H+LK V+
Sbjct:    2 KQYIPIESVFAREILDSRGNPTVEVEVIAEGGFIGRASVPSGASTGAFEAVELRDENSGRYMGKGVETAVDNVNNTIAPEVEGMNVFDQVAVDKLMI-DLDGTPN-----KERLGANAILGVSLAVAKAAAEALGLGLYQYIGGVNAK---TLPVPMMNIINGGKHADNSVNIQEFMIMPVGAENFKEALRMCAEVFHNLKKVL 196          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_ROSCS8.041e-4954.00Enolase OS=Roseiflexus castenholzii (strain DSM 13... [more]
ENO_METSB8.041e-4955.22Enolase OS=Methylocella silvestris (strain BL2 / D... [more]
ENO_LARHH8.041e-4956.78Enolase OS=Laribacter hongkongensis (strain HLHK9)... [more]
ENO_HAHCH8.041e-4953.00Enolase OS=Hahella chejuensis (strain KCTC 2396) G... [more]
ENO_GEOMG8.041e-4955.00Enolase OS=Geobacter metallireducens (strain GS-15... [more]
ENO_FRAAA8.041e-4953.00Enolase OS=Frankia alni (strain ACN14a) GN=eno PE=... [more]
ENO_EDWI98.041e-4955.72Enolase OS=Edwardsiella ictaluri (strain 93-146) G... [more]
ENO_DESVV8.041e-4953.50Enolase OS=Desulfovibrio vulgaris subsp. vulgaris ... [more]
ENO_DESVH8.041e-4953.50Enolase OS=Desulfovibrio vulgaris (strain Hildenbo... [more]
ENO_CLOCE8.041e-4952.45Enolase OS=Clostridium cellulolyticum (strain ATCC... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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