FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_CELJU (Enolase OS=Cellvibrio japonicus (strain Ueda107) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 107/200 (53.50%), Postives = 132/200 (66.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  +KA ++ DSRGNPTV  +V    G V  A  PSGASTG  EALELRDG  S YLGKGV  AV+N+N  I   L GKD  +Q A+D  M+   DGT N     K  LGANAILAVSLA  KA A  KK+PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA  F EA+++G E++H+LK ++
Sbjct:    4 IVDIKAFEVLDSRGNPTVMAEVILESGAVGSACAPSGASTGSREALELRDGDKSRYLGKGVLTAVNNINTTIKNLLVGKDALDQRALDKAMIDA-DGTDN-----KSVLGANAILAVSLAAAKAAAVAKKVPLYAHIADLNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKTFAEALRIGAEIFHNLKKIL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ACIAC (Enolase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=eno PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 106/199 (53.27%), Postives = 136/199 (68.34%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  +  R++ DSRGNPTVE DV    G + RAAVPSGASTG  EA+ELRDG  S YLGKGV KAV ++N  I  A+ G D +EQ  +D  ++  LDGT N     K +LGANA+LAVS+A+ +A A    +PLY+++  + G   L LPVP  NVINGG+HA N L +QEFMI+PVGA  F+EA++ G EV+H LK +I
Sbjct:    4 IVDIVGREVLDSRGNPTVECDVLLESGVMGRAAVPSGASTGSREAIELRDGDKSRYLGKGVLKAVEHINTEISEAVLGLDASEQAFLDKTLID-LDGTDN-----KSRLGANAMLAVSMAVARAAAEESGLPLYRYLGGMGG---LQLPVPMMNVINGGAHANNSLDLQEFMIIPVGAPSFREAVRWGAEVFHALKKII 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO1_STRCO (Enolase 1 OS=Streptomyces coelicolor GN=eno1 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 111/201 (55.22%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            +I  V AR+I DSRGNPTVEV+V   DG   RAAVPSGASTG +EA+ELRDG  S YLGKGV KAV  V   IGP L G D TEQ  ID  M   LD T N     K  LGANAIL VSLA+  A +    +PL+++   L G    +LPVP  N++NGGSHA + + +QEFMI P+GA  F EA++ G EVYH LK V+K
Sbjct:    3 SIDVVVAREILDSRGNPTVEVEVGLDDGSTGRAAVPSGASTGAFEAIELRDGDPSRYLGKGVEKAVLAVIEQIGPELVGYDATEQRLIDQAMF-DLDATDN-----KGSLGANAILGVSLAVAHAASEASDLPLFRY---LGGPNAHLLPVPMMNILNGGSHADSNVDIQEFMIAPIGAESFSEALRWGAEVYHTLKKVLK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_THEM4 (Enolase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 109/204 (53.43%), Postives = 138/204 (67.65%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            M I I  + AR++ DSRGNPTVEV+V   DG V RA VPSGASTG +EALELRD  S  Y GKGV KA+ NVN  I P L G +  EQ +ID  +++ +DGT N     K  +GANAIL VS+A+ +A A+  ++PLYK+   L G    VLPVP  NVINGG+HA N L +QEFMI+P GA  F+EA++ G E +H LK ++K
Sbjct:    1 MYIEIIDIYAREVLDSRGNPTVEVEVMLEDGSVGRAIVPSGASTGKFEALELRDKDSKRYGGKGVLKAIENVNEKIAPKLLGLNAYEQVSIDKTLLE-IDGTEN-----KSNIGANAILGVSMAVSRAVANSLQLPLYKY---LGGVNAKVLPVPLMNVINGGAHADNNLDIQEFMIVPAGAPSFREALRYGAETFHALKRILK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRU0 (Enolase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 108/200 (54.00%), Postives = 134/200 (67.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N++NGGSH+   +A QEFMI+PVGAS F+EA++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYNGLGTEKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYNY---LGGFNTKVLPTPMMNIVNGGSHSDAPIAFQEFMIMPVGASTFKEALRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STAHJ (Enolase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 107/201 (53.23%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            IT V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG +EA+ELRDG  S Y GKGV+KAV NVN II P +   + +  +Q +ID  M+Q LDGT N     K KLGANAIL VS+A+ +A A +   PLYK++   +G +   LPVP  N++NGGSH+   +A QEFMILP GA  F+EA++ G E++H+LK+++
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYSGKGVTKAVENVNEIIAPEIVEGEFSVLDQVSIDKMMIQ-LDGTPN-----KGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQ---LPVPMMNIVNGGSHSDAPIAFQEFMILPTGAESFKEALRWGAEIFHNLKSIL 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PROM9 (Enolase OS=Prochlorococcus marinus (strain MIT 9312) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 100/200 (50.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  ++ARQ+ DSRGNPTVE +V    G   RA VPSGASTG +EA ELRDGGS Y+GKGV  AV+ ++  I PAL G    +QT +D  M+ ++DGT N     K  LGAN+ILAVSLA  +A A+   +PLY+++ +   N   +LPVP  NVINGG+HA N L  QEFM++P G   F E+++MG E++H LK+++ +
Sbjct:    9 IDTIEARQVLDSRGNPTVEAEVFLECGASGRAIVPSGASTGAHEAHELRDGGSKYMGKGVLNAVNKIHETISPALCGLSALDQTTVDKLMI-EIDGTFN-----KSNLGANSILAVSLATARASANALDVPLYRYLGDPLSN---LLPVPLMNVINGGAHAPNSLDFQEFMLVPHGVQNFSESLRMGTEIFHSLKSLLDK 199          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_MAGSA (Enolase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 108/200 (54.00%), Postives = 132/200 (66.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  +  R+I DSRGNPTVEVDV    G + RAAVPSGASTG++EA ELRDG    YLGKGV KA  +VN  I  AL+G D  +Q  +D  M+  LDGT N     K +LGANAIL VSLA  KA A    +PLY+++    G     LPVP  N+INGG+HA N + +QEFMI+PVGAS   EA++MG EV+H LK  +K
Sbjct:    4 IIDIHGREILDSRGNPTVEVDVVLETGVIGRAAVPSGASTGVHEACELRDGDKQRYLGKGVQKACDSVNGEIYDALSGMDVEDQILLDKTMID-LDGTAN-----KSRLGANAILGVSLAAAKAAAEESGLPLYRYVG---GAFASTLPVPMMNIINGGAHADNPIDIQEFMIMPVGASSCSEAIRMGAEVFHALKKTLK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_HYPNA (Enolase OS=Hyphomonas neptunium (strain ATCC 15444) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 109/199 (54.77%), Postives = 130/199 (65.33%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  + AR+I DSRGNPT+EVDVT  DG   RAAVPSGASTG YEA E RDG  + Y GKGV KAV  VN  I   LAG D TEQ  +D  M+  LDGT N     K +LGANAIL VSLA+ KA A    +PLY++   L G    +LP P  N+INGG+HA N + +QEFMI+PV A    EA++MG EV+H LK  +
Sbjct:    4 IIDIHAREILDSRGNPTIEVDVTLDDGSTGRAAVPSGASTGAYEAHEQRDGDKARYNGKGVLKAVDAVNGEICNELAGMDATEQRLVDTLMI-DLDGTEN-----KSRLGANAILGVSLAVAKAAAESSALPLYRY---LGGANARILPTPMMNIINGGAHADNPVDIQEFMIMPVSAESISEAVRMGAEVFHALKKTL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_GEOUR (Enolase OS=Geobacter uraniireducens (strain Rf4) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 111/200 (55.50%), Postives = 136/200 (68.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR+I DSRGNPT+EV+V    G + RAAVPSGASTG  EALELRDG    YLGKGV KAV+NVN II   + G + T+Q  ID  M+  LDGT       K KLGANAIL VSLA+ KA A    + LY++I    G+    LP+P  N+INGG+HA N + +QEFMI+P GA  F EA++MG E++H LKAV+K
Sbjct:    4 ITDVYAREILDSRGNPTLEVEVFLESGAMGRAAVPSGASTGEREALELRDGDKGRYLGKGVLKAVANVNDIIADEVIGMEATDQVGIDRKMLD-LDGTEY-----KSKLGANAILGVSLAVAKAAADEVGLSLYQYIG---GSNAKELPLPMMNIINGGAHADNNVDIQEFMIMPAGAKNFAEALRMGAEIFHALKAVLK 194          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_CELJU8.041e-4953.50Enolase OS=Cellvibrio japonicus (strain Ueda107) G... [more]
ENO_ACIAC8.041e-4953.27Enolase OS=Acidovorax avenae subsp. citrulli (stra... [more]
ENO1_STRCO8.041e-4955.22Enolase 1 OS=Streptomyces coelicolor GN=eno1 PE=3 ... [more]
ENO_THEM41.050e-4853.43Enolase OS=Thermosipho melanesiensis (strain BI429... [more]
ENO_STRU01.050e-4854.00Enolase OS=Streptococcus uberis (strain ATCC BAA-8... [more]
ENO_STAHJ1.050e-4853.23Enolase OS=Staphylococcus haemolyticus (strain JCS... [more]
ENO_PROM91.050e-4850.00Enolase OS=Prochlorococcus marinus (strain MIT 931... [more]
ENO_MAGSA1.050e-4854.00Enolase OS=Magnetospirillum magneticum (strain AMB... [more]
ENO_HYPNA1.050e-4854.77Enolase OS=Hyphomonas neptunium (strain ATCC 15444... [more]
ENO_GEOUR1.050e-4855.50Enolase OS=Geobacter uraniireducens (strain Rf4) G... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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