FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_EXIS2 (Enolase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 108/199 (54.27%), Postives = 132/199 (66.33%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            IT + AR+I DSRGNPTVEV+V T DG   RA VPSGASTG +EA+ELRDG  S YLGKGV KAV NVN  + P + G D  +Q  ID  M+  LDGT N     K   GANAIL +S+A  +A A    +PLY +   L G     LP P  N+INGGSHA N +  QEFMI+PVGA  F+EA++MG E++H LK+V+
Sbjct:    4 ITEIYAREILDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVLKAVDNVNEKLAPEIIGYDVFDQAGIDKKMID-LDGTKN-----KGNFGANAILGISMAAARAAADELGLPLYTY---LGGFNAKTLPTPMMNIINGGSHADNNVDFQEFMIMPVGAPTFKEALRMGAEIFHALKSVL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_DESDA (Enolase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 105/202 (51.98%), Postives = 140/202 (69.31%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            +I +V  R+I DSRGNPTVEV+VT   G  ARAAVPSGASTG  EALE+RDG  + Y GKGV+KAV +VN+ I  AL G D   Q  IDN ++  LDGT N     K +LGANA+L VS+A  +  A    +PLYK++  ++     VLP P  N+INGG+HA N L +QEFMI+PVGA  F+++++MG E++H L+A++K+
Sbjct:    3 SIASVFGREILDSRGNPTVEVEVTLESGLRARAAVPSGASTGSREALEMRDGDKARYCGKGVTKAVDHVNSEIADALLGMDSLRQVQIDNTLID-LDGTDN-----KSRLGANAMLGVSMACARVAASFLGLPLYKYLGGINAK---VLPAPMMNIINGGAHAPNNLDIQEFMIMPVGAMTFRDSLRMGTEIFHMLQAILKK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_DECAR (Enolase OS=Dechloromonas aromatica (strain RCB) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            +I  V AR+I DSRGNPTVE DV    G + RAAVPSGASTG  EA+ELRDG  S YLGKGV +AV NVN  I  A+ G D  EQ  ID  M+  LDGT N     K +LGANAILAVS+A+ KA A    +PLY++     G   + +PVP  N+INGG HA N L +QEFM++PVGA+  +EA++ G E++H LK ++ +
Sbjct:    3 SIVDVIAREILDSRGNPTVEADVLLESGVMGRAAVPSGASTGTREAIELRDGDASRYLGKGVMQAVENVNTEISEAIIGLDAQEQAFIDQTMI-DLDGTDN-----KSRLGANAILAVSMAVAKAAAEESGLPLYRY---FGGMSPMQMPVPMMNIINGGEHANNSLDIQEFMVMPVGAANIREAIRCGAEIFHALKKLLNK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_CLOBA (Enolase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 112/202 (55.45%), Postives = 137/202 (67.82%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            + I  V ARQI DSR  PTVEV+V   DG + RAAVPSGASTG+YEA+ELRDG  D YLGKGV  AV NVN  I  AL G +  +Q  ID  +++ LDGT N     K KLGANAIL VSLA+  A A+   + LYK++  ++     VLPVP  N+INGGSHA N + +QEFMI+PVGA+ F EA++M  EVYH LK  +K
Sbjct:    5 LEIIDVVARQILDSRCFPTVEVEVYLEDGTMGRAAVPSGASTGMYEAVELRDGDKDKYLGKGVLTAVQNVNDTIAEALIGCNVFDQPYIDKMLIE-LDGTNN-----KGKLGANAILGVSLAVANAAANALGLSLYKYVGGVNAK---VLPVPMMNIINGGSHADNSVDLQEFMIMPVGATSFTEALRMCAEVYHTLKNTLK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_CHLAA (Enolase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 112/203 (55.17%), Postives = 132/203 (65.02%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            M+  I A+ AR++ DSRGNPT+EVDV    G V RA VPSGASTG +EALELRDG  S Y GKGV KAV  VN  I  AL G D  +Q A+D  ++  LDGT N     K KLGANAIL VSLA  KA A    +PLY++   L G    VLPVP  N++NGG HA N    QEFMI+PVGA  F+E ++ G E+YH LK VI
Sbjct:    1 MSTLIEAIVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGASTGAHEALELRDGDKSRYNGKGVLKAVQAVNEDIAEALIGFDAADQIALDQELI-ALDGTPN-----KSKLGANAILGVSLAAAKAAAAAFGLPLYRY---LGGVYAHVLPVPMMNIMNGGQHATNSTDFQEFMIMPVGAESFREGLRWGAEIYHMLKKVI 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_CAUCR (Enolase OS=Caulobacter crescentus GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 108/200 (54.00%), Postives = 134/200 (67.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  + AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA E RDG  + YLGKGV +AV  VN  I  AL+G D  +Q  +DN M++ LDGT N     K +LGANAIL VSLA  KA A    +PLYK++  ++     VLP P  N+INGG+HA N + +QEFMILP GA  F+E ++MG E++H LK  +K
Sbjct:    4 IVDIIAREILDSRGNPTVEVDVILEDGAFGRAAVPSGASTGAHEANEKRDGDKARYLGKGVQQAVDAVNGEIFDALSGVDAEDQRRVDNLMIE-LDGTPN-----KARLGANAILGVSLATAKAAAESAGLPLYKYVGGVNAR---VLPTPMMNIINGGAHADNPIDIQEFMILPTGAKDFREGLRMGAEIFHALKKALK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_CAUCN (Enolase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=eno PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48
Identity = 108/200 (54.00%), Postives = 134/200 (67.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  + AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA E RDG  + YLGKGV +AV  VN  I  AL+G D  +Q  +DN M++ LDGT N     K +LGANAIL VSLA  KA A    +PLYK++  ++     VLP P  N+INGG+HA N + +QEFMILP GA  F+E ++MG E++H LK  +K
Sbjct:    4 IVDIIAREILDSRGNPTVEVDVILEDGAFGRAAVPSGASTGAHEANEKRDGDKARYLGKGVQQAVDAVNGEIFDALSGVDAEDQRRVDNLMIE-LDGTPN-----KARLGANAILGVSLATAKAAAESAGLPLYKYVGGVNAR---VLPTPMMNIINGGAHADNPIDIQEFMILPTGAKDFREGLRMGAEIFHALKKALK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PROMM (Enolase OS=Prochlorococcus marinus (strain MIT 9313) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 104/200 (52.00%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            + I  + AR++ DSRGNPTVE +V    G + RA VPSGASTG +EA ELRDG S YLGKGV+KAV+++   I PAL G    +Q ++D  M Q+LDG+ N     K  LGANAILAVS+A  +A A+   +PLY++   L G    +LPVP  NVINGG+HA N L  QEFM++P GAS F+E+++MG EV+H LK ++
Sbjct:    7 LVIDTIVAREVLDSRGNPTVEAEVLLEAGAIGRAIVPSGASTGAHEAHELRDGDSRYLGKGVTKAVNHIEDRIAPALCGISSLDQASVDGTM-QELDGSDN-----KSSLGANAILAVSMATARAAANGLGLPLYRY---LGGPMASLLPVPLMNVINGGAHAANNLDFQEFMLVPHGASSFRESLRMGAEVFHTLKGLL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PROM0 (Enolase OS=Prochlorococcus marinus (strain MIT 9301) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 102/198 (51.52%), Postives = 135/198 (68.18%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  V+ARQ+ DSRGNPTVE +V    G   RA VPSGASTG +EA ELRDGGS Y+GKGV  AV+ ++  I PAL G    +Q A+D  M+ ++DGT N     K  LGAN+ILAVSLA  +A A+   IPLY+++ +   N   +LPVP  NVINGG+HA N L  QEFM++P G + F E+++MG E++H LK+++
Sbjct:    9 IDTVEARQVLDSRGNPTVEAEVFLECGASGRAIVPSGASTGAHEAHELRDGGSKYMGKGVLNAVNKIHETISPALCGLSSLDQIAVDKLMI-EIDGTPN-----KSNLGANSILAVSLATARASANALDIPLYRYLGDPLSN---LLPVPLMNVINGGAHAPNSLDFQEFMLVPHGVNNFSESLRMGTEIFHSLKSLL 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PELPD (Enolase OS=Pelobacter propionicus (strain DSM 2379) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 109/200 (54.50%), Postives = 134/200 (67.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  + AR+I DSRGNPT+EVDV    G   RAAVPSGASTG  EALELRDG  + YLGKGV KAV NVN  I   L G D  +Q AIDN M++ LDGT       K KLGANA L VSLA+ KA A    + L+K+I      +   LP+P  N++NGG+HA N + +QEFMI+P GA CF EA++MG E++H LK+V+K
Sbjct:    4 IVDIYAREILDSRGNPTLEVDVFLESGAFGRAAVPSGASTGEREALELRDGDMARYLGKGVLKAVDNVNNEIADELIGMDADDQVAIDNKMLE-LDGTE-----FKSKLGANATLGVSLAVAKAAADEAGLSLHKYIGGAGARE---LPLPMMNILNGGAHADNNVDIQEFMIMPAGARCFAEALRMGAEIFHALKSVLK 194          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_EXIS21.050e-4854.27Enolase OS=Exiguobacterium sibiricum (strain DSM 1... [more]
ENO_DESDA1.050e-4851.98Enolase OS=Desulfovibrio desulfuricans (strain ATC... [more]
ENO_DECAR1.050e-4852.97Enolase OS=Dechloromonas aromatica (strain RCB) GN... [more]
ENO_CLOBA1.050e-4855.45Enolase OS=Clostridium botulinum (strain Alaska E4... [more]
ENO_CHLAA1.050e-4855.17Enolase OS=Chloroflexus aurantiacus (strain ATCC 2... [more]
ENO_CAUCR1.050e-4854.00Enolase OS=Caulobacter crescentus GN=eno PE=3 SV=1[more]
ENO_CAUCN1.050e-4854.00Enolase OS=Caulobacter crescentus (strain NA1000 /... [more]
ENO_PROMM1.372e-4852.00Enolase OS=Prochlorococcus marinus (strain MIT 931... [more]
ENO_PROM01.372e-4851.52Enolase OS=Prochlorococcus marinus (strain MIT 930... [more]
ENO_PELPD1.372e-4854.50Enolase OS=Pelobacter propionicus (strain DSM 2379... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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