FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PEDPA (Enolase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 107/199 (53.77%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            IT + AR++ DSRGNPTVEV+V T DG   R  VPSGASTG +EA+ELRDG  + + GKGV KAV+NVN  I   + G + T+Q AID  M+ +LDGT N     K KLGANAIL VSLA+ +A A   ++PLY +I    G+   VLP P  NVINGG+H+ NK+  QEFMI+PVGA   +EA++MG E +H LK+++
Sbjct:    4 ITDIYAREVLDSRGNPTVEVEVYTEDGGFGRGIVPSGASTGEHEAVELRDGDKNRFSGKGVEKAVANVNGPISKEIVGFEVTDQIAIDKAMI-KLDGTPN-----KGKLGANAILGVSLAVARAAADELQVPLYNYI---GGSNAHVLPTPMMNVINGGAHSENKVDFQEFMIMPVGAPSVKEAIRMGSETFHALKSLL 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_NAUPA (Enolase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 106/200 (53.00%), Postives = 132/200 (66.00%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I I  + A ++ DSRGNPTV   VT SDG  A A VPSGASTG+ EALELRDGG  YLGKGV KA  NVN +I   L G  P +Q  IDN M+ +LDGT N     K KLGANAIL VS+A+ +A A+   +PL+++   L G   LVLP P  N+INGG+HA N + +QE+MI+P G   F EA++   EVYH LK ++
Sbjct:    2 IFIEDIFADEVLDSRGNPTVRATVTLSDGSRASAIVPSGASTGVNEALELRDGGERYLGKGVLKACENVNTLIANELIGMSPYDQAEIDNIML-ELDGTEN-----KSKLGANAILGVSMAVARAAANSLDLPLFRY---LGGANALVLPTPMLNIINGGAHADNDVDLQEYMIMPTGFDDFAEALRASSEVYHTLKKLL 192          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_MYCSS (Enolase OS=Mycobacterium sp. (strain MCS) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 106/200 (53.00%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  V AR+I DSRGNPTVEV++  +DG  ARAAVPSGASTG +EA+ELRDGGS Y GKGV KAV  V   I PA+ G    +Q  ID  ++  LDGT +     K +LGANAIL VSLA+ KA A    +PL+++   L G    +LPVP  N++NGG+HA   + +QEFM+ P+GA  F+EA++ G EVYH LK+V+K+
Sbjct:    4 IEQVGAREILDSRGNPTVEVELALTDGTFARAAVPSGASTGEHEAVELRDGGSRYGGKGVDKAVQAVLDDIAPAVIGMSADDQRLIDQALL-DLDGTPD-----KSRLGANAILGVSLAVSKAAAESAGLPLFRY---LGGPNAHILPVPMMNILNGGAHADTGVDVQEFMVAPIGAPSFKEALRWGAEVYHSLKSVLKK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_MYCSK (Enolase OS=Mycobacterium sp. (strain KMS) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 106/200 (53.00%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  V AR+I DSRGNPTVEV++  +DG  ARAAVPSGASTG +EA+ELRDGGS Y GKGV KAV  V   I PA+ G    +Q  ID  ++  LDGT +     K +LGANAIL VSLA+ KA A    +PL+++   L G    +LPVP  N++NGG+HA   + +QEFM+ P+GA  F+EA++ G EVYH LK+V+K+
Sbjct:    4 IEQVGAREILDSRGNPTVEVELALTDGTFARAAVPSGASTGEHEAVELRDGGSRYGGKGVDKAVQAVLDDIAPAVIGMSADDQRLIDQALL-DLDGTPD-----KSRLGANAILGVSLAVSKAAAESAGLPLFRY---LGGPNAHILPVPMMNILNGGAHADTGVDVQEFMVAPIGAPSFKEALRWGAEVYHSLKSVLKK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_MYCSJ (Enolase OS=Mycobacterium sp. (strain JLS) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 106/200 (53.00%), Postives = 137/200 (68.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  V AR+I DSRGNPTVEV++  +DG  ARAAVPSGASTG +EA+ELRDGGS Y GKGV KAV  V   I PA+ G    +Q  ID  ++  LDGT +     K +LGANAIL VSLA+ KA A    +PL+++   L G    +LPVP  N++NGG+HA   + +QEFM+ P+GA  F+EA++ G EVYH LK+V+K+
Sbjct:    4 IEQVGAREILDSRGNPTVEVELALTDGTFARAAVPSGASTGEHEAVELRDGGSRYGGKGVDKAVQAVLDDIAPAVIGMSADDQRLIDQALL-DLDGTPD-----KSRLGANAILGVSLAVSKAAAESAGLPLFRY---LGGPNAHILPVPMMNILNGGAHADTGVDVQEFMVAPIGAPSFKEALRWGAEVYHSLKSVLKK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_MYCA5 (Enolase OS=Mycoplasma arthritidis (strain 158L3-1) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 110/209 (52.63%), Postives = 138/209 (66.03%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYL-----GKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKRIRXG 706
            I ++ A ++ DSRGNPTV+V++TT   + A A VPSGASTG  EALELRD G+ Y      GKGV  AV NVN II PAL GKD T+Q  ID  M++ LDGT       K KLGANAILAVSLA+ KA A+   +PLY ++A+L   +   LPVP  NVINGG HA N +  QEFMI+P+GA  F+EAM++   V+H L  ++K    G
Sbjct:    4 IVSINAYEVLDSRGNPTVKVELTTEKAY-AEALVPSGASTGSKEALELRDKGTKYEKNWFGGKGVQTAVDNVNEIIFPALKGKDVTKQFEIDKLMIE-LDGTET-----KSKLGANAILAVSLAVAKAAANEANVPLYAYLAKLDNRQAYKLPVPMLNVINGGEHASNTIDFQEFMIMPLGAKTFKEAMQIANFVFHTLAKLLKEAGHG 205          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ERWCT (Enolase OS=Erwinia carotovora subsp. atroseptica GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 112/201 (55.72%), Postives = 133/201 (66.17%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  A+ GKD  +Q  ID  M+  LDGT N     K + GANAILAVSLA  KA A  K +PLY HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA   +EA++MG EV+H L  V+K
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQAVLGKDAKDQANIDKIMID-LDGTEN-----KSQFGANAILAVSLAAAKAAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAIRMGSEVFHTLAKVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ACIC1 (Enolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=eno PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 104/199 (52.26%), Postives = 136/199 (68.34%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I A+ AR+I DSRGNPTVEV+V   DG V RAAVPSGASTG +EA+E RDG   Y GKGV +AV  V   I P + G D TEQ  +D  ++ +LDGT N     K +LGANAIL VS+A+ +A A    +PL+++   L G    +LPVP  N++NGG+HA + + +QEF+I P+GA+ F EA++ GVE YH LKAV+K
Sbjct:    4 IEAIGAREILDSRGNPTVEVEVLLDDGTVGRAAVPSGASTGAFEAVEKRDGDDRYGGKGVRQAVQAVTDQIAPEIIGFDATEQRVLDARLI-ELDGTPN-----KSRLGANAILGVSMAVARAAADSADLPLFRY---LGGPNAHLLPVPMMNILNGGAHADSNVDIQEFLIAPIGAATFAEALRYGVETYHALKAVLK 193          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_WOLPM (Enolase OS=Wolbachia pipientis wMel GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 106/201 (52.74%), Postives = 136/201 (67.66%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  V AR+I DSRG PT+EV++   DG + RA+VPSGASTG  E LELRD     Y GKGV KAV  VN II   + G +  +Q AID  +++ LDGT N     K KLGANA L VSLA+ KA A+  K+PLY++   L G +  V+PVP  N+INGG HA NKL  QEFMILPVGA  F EA+++  EV+H+L++++K+
Sbjct:    5 INNVFAREILDSRGYPTIEVEIELCDGAIGRASVPSGASTGKLEVLELRDQDEKRYCGKGVLKAVQAVNGIIADEIIGMNAADQNAIDKALIE-LDGTKN-----KSKLGANATLGVSLAVAKAAANSFKMPLYRY---LGGKQTSVMPVPLINIINGGVHADNKLDFQEFMILPVGAETFSEAIRISAEVFHNLRSILKK 196          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_VIBF1 (Enolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 110/201 (54.73%), Postives = 131/201 (65.17%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  + +LGKGV KAV+ VN  I  AL GKD   Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY HIAEL+G   +  +P+P  N+INGG HA N + +QEFMI PVGA   +E +++G EV+H+L  V+K
Sbjct:    4 IVKVLGREIIDSRGNPTVEAEVHLESGFVGMAAAPSGASTGSREALELRDGDKARFLGKGVLKAVAAVNGPIAEALVGKDAKNQAEIDQIMID-LDGTDN-----KANFGANAILAVSLANAKAAAAAKSMPLYAHIAELNGTPGVFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEGLRIGAEVFHNLAKVLK 198          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PEDPA1.372e-4853.77Enolase OS=Pediococcus pentosaceus (strain ATCC 25... [more]
ENO_NAUPA1.372e-4853.00Enolase OS=Nautilia profundicola (strain ATCC BAA-... [more]
ENO_MYCSS1.372e-4853.00Enolase OS=Mycobacterium sp. (strain MCS) GN=eno P... [more]
ENO_MYCSK1.372e-4853.00Enolase OS=Mycobacterium sp. (strain KMS) GN=eno P... [more]
ENO_MYCSJ1.372e-4853.00Enolase OS=Mycobacterium sp. (strain JLS) GN=eno P... [more]
ENO_MYCA51.372e-4852.63Enolase OS=Mycoplasma arthritidis (strain 158L3-1)... [more]
ENO_ERWCT1.372e-4855.72Enolase OS=Erwinia carotovora subsp. atroseptica G... [more]
ENO_ACIC11.372e-4852.26Enolase OS=Acidothermus cellulolyticus (strain ATC... [more]
ENO_WOLPM1.791e-4852.74Enolase OS=Wolbachia pipientis wMel GN=eno PE=3 SV... [more]
ENO_VIBF11.791e-4854.73Enolase OS=Vibrio fischeri (strain ATCC 700601 / E... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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