FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_THISH (Enolase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 107/200 (53.50%), Postives = 134/200 (67.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  + AR+I DSRGNPTVE +VT + G + RAAVPSGASTG  EA+ELRD    Y GKGV KAV +VN  I  AL G   T+  A+D  M+ +LDGT N     K +LGANA+LAVS+A   A A    +PLY+H   L G + + LPVP  N++NGG+HA N + MQEFMILPVGAS   EA++ G EV+H LK V+ +
Sbjct:    4 IVDIHAREIIDSRGNPTVEAEVTLASGVMGRAAVPSGASTGAREAIELRDDDVRYGGKGVRKAVGHVNGEIREALLGMKATDLAAVDGRMI-ELDGTPN-----KSRLGANALLAVSMATAHANAADAGMPLYRH---LGGEEAVTLPVPMMNIVNGGAHADNSVDMQEFMILPVGASSIAEAVRYGAEVFHALKKVLHK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRS7 (Enolase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRS2 (Enolase OS=Streptococcus suis (strain 98HAH33) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN +I  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMILPVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGFDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPSFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRPZ (Enolase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRPM (Enolase OS=Streptococcus pyogenes serotype M28 GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRPG (Enolase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRPF (Enolase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRPD (Enolase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRPC (Enolase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIT-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRPB (Enolase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIT-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_THISH1.791e-4853.50Enolase OS=Thioalkalivibrio sp. (strain HL-EbGR7) ... [more]
ENO_STRS71.791e-4854.00Enolase OS=Streptococcus equi subsp. zooepidemicus... [more]
ENO_STRS21.791e-4854.00Enolase OS=Streptococcus suis (strain 98HAH33) GN=... [more]
ENO_STRPZ1.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M49 (st... [more]
ENO_STRPM1.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M28 GN=... [more]
ENO_STRPG1.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M5 (str... [more]
ENO_STRPF1.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M4 (str... [more]
ENO_STRPD1.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M2 (str... [more]
ENO_STRPC1.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M12 (st... [more]
ENO_STRPB1.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M12 (st... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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