FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRP8 (Enolase OS=Streptococcus pyogenes serotype M18 GN=eno PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRP6 (Enolase OS=Streptococcus pyogenes serotype M6 GN=eno PE=1 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAKAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRP3 (Enolase OS=Streptococcus pyogenes serotype M3 GN=eno PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRP1 (Enolase OS=Streptococcus pyogenes serotype M1 GN=eno PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STREM (Enolase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_STRE4 (Enolase OS=Streptococcus equi subsp. equi (strain 4047) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/200 (54.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+A+ +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA  F+E ++ G EV+H LK ++K
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILK 194          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_SILST (Enolase OS=Silicibacter sp. (strain TM1040) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 108/197 (54.82%), Postives = 134/197 (68.02%), Query Frame = 2
Query:   92 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLK 679
            TI  + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG YEA+E RDG  S Y+GKGV +AV+ VN  I   L G D TEQ +ID  M+ +LDGT N     K +LGANAIL VS+A+ KA A     PLY+++    G    +LPVP  N+INGG HA N + +QEFMI+PV A   ++A++MG EV+H LK
Sbjct:    3 TIIDIHAREILDSRGNPTVEVDVVLEDGTMGRAAVPSGASTGAYEAVEKRDGDKSRYMGKGVLEAVAAVNGEIADELVGFDATEQVSIDRAMI-ELDGTEN-----KGRLGANAILGVSMAVAKAAADFTTQPLYRYV---GGAAARILPVPMMNIINGGEHADNPIDIQEFMIMPVAAENIRDAVRMGSEVFHTLK 190          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_RHOP5 (Enolase OS=Rhodopseudomonas palustris (strain BisA53) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 106/201 (52.74%), Postives = 131/201 (65.17%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  +  R+I DSRGNPTVEVDV   DG V RAAVPSGASTG +EA+ELRDG    Y GKGV KAV  +N  +  AL G D   Q  ID  M+  LDGT N     K +LGANAIL +SLA+ KA A    +PLY+++    G    +LPVP  N+INGG HA N +  QEFMI+PVGA  F EA++ G E++H LK+ +K+
Sbjct:    4 IVDIIGREILDSRGNPTVEVDVVLEDGAVGRAAVPSGASTGAHEAVELRDGDKGRYGGKGVQKAVEAINGELFDALGGMDAESQVQIDEVMI-ALDGTPN-----KARLGANAILGISLAVAKAAAESYDMPLYRYV---GGTSARMLPVPMMNIINGGMHADNPIDFQEFMIMPVGADSFSEALRCGAEIFHTLKSELKK 195          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PROMH (Enolase OS=Proteus mirabilis (strain HI4320) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 110/201 (54.73%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAV  VN  I  AL G+D  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HI++L+G      +P+P  N+INGG HA N + +QEFMI PVGA   +EA++MG E++HHL  V+K
Sbjct:    4 IVKVLGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVEAVNGPIAKALLGQDAKDQANIDKIMID-LDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHISDLNGTHGQYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAPTLKEAVRMGSEIFHHLAKVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_MYCUA (Enolase OS=Mycobacterium ulcerans (strain Agy99) GN=eno PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.791e-48
Identity = 105/200 (52.50%), Postives = 136/200 (68.00%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I  V AR+I DSRGNPTVEV+V   DG  ARAAVPSGASTG +EA+ELRDGG  Y GKGV KAV  V   IGPA+ G +  +Q  +D  +V  LDGT +     K +LG N+IL VSLA+ KA +   ++PL+++I    G    +LPVP  N++NGG+HA   + +QEFM+ P+GA  F EA++ G EVYH LKAV+K+
Sbjct:    4 IEQVGAREILDSRGNPTVEVEVALIDGTFARAAVPSGASTGEHEAVELRDGGDRYGGKGVKKAVEAVLDEIGPAVIGLNADDQRLVDQALV-DLDGTPD-----KSRLGGNSILGVSLAVAKAASESAELPLFRYI---GGPNAHILPVPMMNILNGGAHADTGVDIQEFMVAPIGAPSFSEALRWGAEVYHALKAVLKK 194          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_STRP81.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M18 GN=... [more]
ENO_STRP61.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M6 GN=e... [more]
ENO_STRP31.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M3 GN=e... [more]
ENO_STRP11.791e-4854.00Enolase OS=Streptococcus pyogenes serotype M1 GN=e... [more]
ENO_STREM1.791e-4854.00Enolase OS=Streptococcus equi subsp. zooepidemicus... [more]
ENO_STRE41.791e-4854.00Enolase OS=Streptococcus equi subsp. equi (strain ... [more]
ENO_SILST1.791e-4854.82Enolase OS=Silicibacter sp. (strain TM1040) GN=eno... [more]
ENO_RHOP51.791e-4852.74Enolase OS=Rhodopseudomonas palustris (strain BisA... [more]
ENO_PROMH1.791e-4854.73Enolase OS=Proteus mirabilis (strain HI4320) GN=en... [more]
ENO_MYCUA1.791e-4852.50Enolase OS=Mycobacterium ulcerans (strain Agy99) G... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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