FC930107

Overview
NameFC930107
Unique NameFC930107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930107_ssr35 microsatellite FC930107_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_KLULA (Enolase OS=Kluyveromyces lactis GN=ENO PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.791e-56
Identity = 123/205 (60.00%), Postives = 149/205 (72.68%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            I+ V AR ++DSRGNPTVEV++TT  G   R+ VPSGASTG++EALELRDG  S +LGKGV  AVSNVN II PAL  A  D T Q  +D+ ++  LDGT N     K KLGANAIL VSLA  KAGA  K +PLY+H+A+L+G K    VLPVP  NV+NGGSHAG  LA+QEFMI P GA  F EA++MG EVYH+LK++ K+
Sbjct:    3 ISKVYARSVYDSRGNPTVEVELTTEKG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLTAVSNVNNIIAPALVKANVDVTNQQQVDDLLLS-LDGTAN-----KSKLGANAILGVSLAASKAGAAAKNVPLYQHLADLAGAKTQPFVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAETFAEALRMGSEVYHNLKSLTKK 200          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ALLMI (Enolase (Fragment) OS=Alligator mississippiensis PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.371e-55
Identity = 119/182 (65.38%), Postives = 142/182 (78.02%), Query Frame = 2
Query:  155 DVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            D+ TS G + RAAVPSGASTGIYEALELRD     ++GKGVSKAV++VN  I PAL  K+ +  EQ  ID  M++ +DG+ N     K K GANAIL VSLA+CKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  F+EAM++G EVYH+LK VIK
Sbjct:    1 DLYTSKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSKAVAHVNKTIAPALISKNISVVEQEKIDRLMLE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFKEAMRIGAEVYHNLKNVIK 175          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO1_DEBHA (Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.402e-55
Identity = 121/206 (58.74%), Postives = 151/206 (73.30%), Query Frame = 2
Query:   89 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            +TI+ V +R ++DSRGNPTVEVDVTT +G + RA VPSGASTGI EA+ELRDG  S + GKGV+KAV NVN  I P L  +G D   Q  ID+++++ LDGT N     K+ LGANAIL VSLA+ KAGA  K++PLY+HIA++S +K    VLPVP  NV+NGGSHAG  LA QEFMI P  A  F EA+++G EVYHHLK++ K
Sbjct:    1 MTISKVHSRYVYDSRGNPTVEVDVTTENG-LFRAIVPSGASTGINEAMELRDGDKSKWQGKGVTKAVDNVNKTIAPHLIKSGLDEKNQEEIDSFLLK-LDGTPN-----KRSLGANAILGVSLAVAKAGAAAKQVPLYRHIADISKSKQDKYVLPVPFQNVLNGGSHAGGSLAFQEFMIAPTNAPSFSEALRIGSEVYHHLKSLTK 199          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_TUBBO (Enolase OS=Tuber borchii GN=eno-1 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.749e-55
Identity = 120/204 (58.82%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIKR 694
            IT + AR ++DSRGNPTVEVD+TT+D  + RA VPSGASTG +EA+ELRD   + + GKGV KAV NVN II PAL  +  D  +Q  ID +++  LDGT N     K KLGANAIL VSLA+ KAGA  KK+PLY H+A+L+G K   VLPVP  NVINGGSHAG +LA QEFMI+P  A  F EAM+ G EVY  LK + K+
Sbjct:    2 ITKIHARSVYDSRGNPTVEVDLTTTDTGLHRAIVPSGASTGQHEAIELRDKDKTKWAGKGVLKAVENVNTIIAPALIKEKFDVKDQATIDKFLID-LDGTPN-----KAKLGANAILGVSLAVAKAGAAAKKVPLYAHVADLAGTKKPFVLPVPFMNVINGGSHAGGRLAFQEFMIVPSEAPSFTEAMRQGAEVYQILKTLTKK 199          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PSEMY (Enolase OS=Pseudomonas mendocina (strain ymp) GN=eno PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.749e-55
Identity = 116/201 (57.71%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  +K R++ DSRGNPTVE DV    G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD T+Q A+D  M++ LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G   +  +PVP  N+INGG HA N + +QEFM+ PVGA  F +A++MG E++HHLKAV+K
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILEGGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDATDQQALDRAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGVYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNFADALRMGAEIFHHLKAVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_ANATD (Enolase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=eno PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.749e-55
Identity = 114/205 (55.61%), Postives = 145/205 (70.73%), Query Frame = 2
Query:   80 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTGI+EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLA+ KA A+   +PLY++I  ++      LPVP  N++NGG HA N + +QEFMI+PVGA  F EA++M  E +HHL+ V+K
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGIFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDKLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSVDLQEFMIMPVGAKSFSEALRMCAETFHHLRNVLK 197          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_FLAPJ (Enolase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=eno PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.509e-55
Identity = 116/198 (58.59%), Postives = 138/198 (69.70%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVI 688
            I  + ARQIFDSRGNPT+EVDV T +G + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV NVN II   L G    EQ  ID  M+  LDGT N     K  LGANAIL VSLA  KA A+   +PLY++I  +S N    LPVP  N+INGGSH+   +A QEFMI+PV A+ F +AM+MG E++HHLK V+
Sbjct:    4 IIKIHARQIFDSRGNPTIEVDVVTENGVLGRAAVPSGASTGEHEAMELRDGGKAYLGKGVLKAVENVNTIIASELLGTSVFEQNLIDKIMI-DLDGTPN-----KSNLGANAILGVSLAAAKAAANELGLPLYRYIGGVSAN---TLPVPMMNIINGGSHSDAPIAFQEFMIIPVKAASFTQAMQMGTEIFHHLKKVL 192          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PSEAE (Enolase OS=Pseudomonas aeruginosa GN=eno PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.807e-55
Identity = 116/201 (57.71%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD  +Q A+D+ M++ LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA  F EA++MG E++HHLKAV+K
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNFAEALRMGAEIFHHLKAVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PSEAB (Enolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=eno PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.807e-55
Identity = 116/201 (57.71%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD  +Q A+D+ M++ LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA  F EA++MG E++HHLKAV+K
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNFAEALRMGAEIFHHLKAVLK 198          
BLAST of FC930107 vs. ExPASy Swiss-Prot
Match: ENO_PSEA8 (Enolase OS=Pseudomonas aeruginosa (strain LESB58) GN=eno PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.807e-55
Identity = 116/201 (57.71%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAICKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFQEAMKMGVEVYHHLKAVIK 691
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD  +Q A+D+ M++ LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA  F EA++MG E++HHLKAV+K
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNFAEALRMGAEIFHHLKAVLK 198          
The following BLAST results are available for this feature:
BLAST of FC930107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_KLULA6.791e-5660.00Enolase OS=Kluyveromyces lactis GN=ENO PE=3 SV=1[more]
ENO_ALLMI3.371e-5565.38Enolase (Fragment) OS=Alligator mississippiensis P... [more]
ENO1_DEBHA4.402e-5558.74Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV... [more]
ENO_TUBBO5.749e-5558.82Enolase OS=Tuber borchii GN=eno-1 PE=1 SV=1[more]
ENO_PSEMY5.749e-5557.71Enolase OS=Pseudomonas mendocina (strain ymp) GN=e... [more]
ENO_ANATD5.749e-5555.61Enolase OS=Anaerocellum thermophilum (strain DSM 6... [more]
ENO_FLAPJ7.509e-5558.59Enolase OS=Flavobacterium psychrophilum (strain JI... [more]
ENO_PSEAE9.807e-5557.71Enolase OS=Pseudomonas aeruginosa GN=eno PE=3 SV=1[more]
ENO_PSEAB9.807e-5557.71Enolase OS=Pseudomonas aeruginosa (strain UCBPP-PA... [more]
ENO_PSEA89.807e-5557.71Enolase OS=Pseudomonas aeruginosa (strain LESB58) ... [more]

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Properties
Property NameValue
Genbank descriptionC34003H03EF PostHarvC1 Citrus clementina cDNA clone C34003H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930107 ID=FC930107; Name=FC930107; organism=Citrus clementina; type=EST; length=715bp
GACTTAATCACAAGACTCTTCTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGGTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TATCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTGTTTTCAAGAAGCCATGAAGA
TGGGTGTAGAAGTATATCACCATCTGAAGGCTGTGATTAAAAGAATACGG
NCAGGATGCTACAAT
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