FC930110

Overview
NameFC930110
Unique NameFC930110
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_RHOSK (Enolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=eno PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 109/197 (55.33%), Postives = 133/197 (67.51%), Query Frame = 3
Query:   87 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLK 674
            TI  + AR+I DSRGNPTVEVDVT   G   RAAVPSGASTG +EA+E RDG  S Y+GKGV +AV+ VN  I   L G D TEQ  ID  M+ ++DGT N     K +LGANAIL VSLAV KA A     PL++++    G+   VLPVP  N+INGG HA N + +QEFMI+PV A +  EA++MG EV+H LK
Sbjct:    3 TIIDIHAREILDSRGNPTVEVDVTLESGAFGRAAVPSGASTGAHEAVEKRDGDKSRYMGKGVLEAVAAVNGEIAEMLVGFDATEQVGIDRTMI-EMDGTPN-----KGRLGANAILGVSLAVAKAAAEFTNQPLFRYV---GGSSARVLPVPMMNIINGGEHADNPIDIQEFMIMPVAAQNVREAIRMGSEVFHTLK 190          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_RHOS4 (Enolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=eno PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 109/197 (55.33%), Postives = 133/197 (67.51%), Query Frame = 3
Query:   87 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLK 674
            TI  + AR+I DSRGNPTVEVDVT   G   RAAVPSGASTG +EA+E RDG  S Y+GKGV +AV+ VN  I   L G D TEQ  ID  M+ ++DGT N     K +LGANAIL VSLAV KA A     PL++++    G+   VLPVP  N+INGG HA N + +QEFMI+PV A +  EA++MG EV+H LK
Sbjct:    3 TIIDIHAREILDSRGNPTVEVDVTLESGAFGRAAVPSGASTGAHEAVEKRDGDKSRYMGKGVLEAVAAVNGEIAEMLVGFDATEQVGIDRTMI-EMDGTPN-----KGRLGANAILGVSLAVAKAAAEFTNQPLFRYV---GGSSARVLPVPMMNIINGGEHADNPIDIQEFMIMPVAAQNVREAIRMGSEVFHTLK 190          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_RHOS1 (Enolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=eno PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 109/197 (55.33%), Postives = 133/197 (67.51%), Query Frame = 3
Query:   87 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLK 674
            TI  + AR+I DSRGNPTVEVDVT   G   RAAVPSGASTG +EA+E RDG  S Y+GKGV +AV+ VN  I   L G D TEQ  ID  M+ ++DGT N     K +LGANAIL VSLAV KA A     PL++++    G+   VLPVP  N+INGG HA N + +QEFMI+PV A +  EA++MG EV+H LK
Sbjct:    3 TIIDIHAREILDSRGNPTVEVDVTLESGAFGRAAVPSGASTGAHEAVEKRDGDKSRYMGKGVLEAVAAVNGEIAEMLVGFDATEQVGIDRTMI-EMDGTPN-----KGRLGANAILGVSLAVAKAAAEFTNQPLFRYV---GGSSARVLPVPMMNIINGGEHADNPIDIQEFMIMPVAAQNVREAIRMGSEVFHTLK 190          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_PROM1 (Enolase OS=Prochlorococcus marinus (strain NATL1A) GN=eno PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 103/199 (51.76%), Postives = 133/199 (66.83%), Query Frame = 3
Query:   78 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLK 674
            + + I  + AR++ DSRGNPTVE +V    G + R+ VPSGASTG +EA ELRDGG  YLGKGV KAV+++   I PAL G    +Q  +D+ M +QLD T N     K  LGAN+ILAVS+A  +A A+   +PLY++   L G  + +LPVP  NVINGG HA N L  QEFM++P GA SF EA++MG EV+H LK
Sbjct:    5 LELVIDTIMAREVLDSRGNPTVEAEVLLEGGAIGRSIVPSGASTGAHEAHELRDGGKRYLGKGVLKAVNHIEENIAPALCGLSSLDQATVDSVM-KQLDDTDN-----KSNLGANSILAVSMATARAAANGLGLPLYRY---LGGPMSSLLPVPLMNVINGGEHAANNLDFQEFMLVPHGAESFREALRMGAEVFHTLK 194          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_PECCP (Enolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=eno PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 112/199 (56.28%), Postives = 131/199 (65.83%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAV 680
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  A+ GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA +  EA++MG EV+H L  V
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQAVVGKDAKDQANIDKIMID-LDGTDN-----KSKFGANAILAVSLAAAKAAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAIRMGSEVFHTLAKV 196          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_METMP (Enolase OS=Methanococcus maripaludis GN=eno PE=3 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 110/197 (55.84%), Postives = 126/197 (63.96%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAV 680
            I  +KARQ+ DSRGNPTVE +V T+ G      VPSGASTG +EA+ELRD    Y GK V  AVSNVN II   L G+D   Q  ID  M+  LDGT N     K  LGANAILAVSLAV KA A    +PLYK+I    G+   V+P P  NV+NGG HAGN L  QEFMI+PVGA SF EA++M  E Y  LK V
Sbjct:    7 IYEIKARQVLDSRGNPTVEAEVLTAGGGYGHTIVPSGASTGTFEAVELRDKKEKYGGKSVLNAVSNVNDIIAQELIGEDARNQRLIDQIML-NLDGTEN-----KGNLGANAILAVSLAVAKAAADTASLPLYKYI---GGSNAYVMPAPMMNVLNGGQHAGNALDFQEFMIMPVGADSFAEAVRMCSETYQSLKKV 194          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_METM7 (Enolase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=eno PE=3 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 110/197 (55.84%), Postives = 125/197 (63.45%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAV 680
            I  +KARQ+ DSRGNPTVE +V T+ G      VPSGASTG +EA+ELRD    Y GK V  AVSNVN II   L G+D   Q  ID  M+  LDGT N     K  LGANAILAVSLAV KA A    +PLYK+I    G    V+P P  NV+NGG HAGN L  QEFMI+PVGA SF EA++M  E Y  LK V
Sbjct:    7 IYEIKARQVLDSRGNPTVEAEVLTAGGGYGHTIVPSGASTGTFEAVELRDATEKYGGKSVLNAVSNVNDIIAQELIGEDARNQRLIDQIML-NLDGTEN-----KGNLGANAILAVSLAVAKAAADTASLPLYKYI---GGCNAYVMPAPMMNVLNGGQHAGNALDFQEFMIMPVGADSFAEAVRMCAETYQSLKKV 194          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_ACTP7 (Enolase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=eno PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 112/199 (56.28%), Postives = 133/199 (66.83%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAV 680
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAVS VN  I  A+ GKD + Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY +IAEL+G   +  +P+P  N+INGG HA N + +QEFMI PVGAS+  EA+++G EV+H+L  V
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVSAVNNEIAQAILGKDGSAQAEIDQIMID-LDGTDN-----KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGASTLKEALRIGAEVFHNLAKV 196          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_ACTP2 (Enolase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=eno PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 112/199 (56.28%), Postives = 133/199 (66.83%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKAV 680
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAVS VN  I  A+ GKD + Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY +IAEL+G   +  +P+P  N+INGG HA N + +QEFMI PVGAS+  EA+++G EV+H+L  V
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVSAVNNEIAQAILGKDGSAQAEIDQIMID-LDGTDN-----KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGASTLKEALRIGAEVFHNLAKV 196          
BLAST of FC930110 vs. ExPASy Swiss-Prot
Match: ENO_RHOP5 (Enolase OS=Rhodopseudomonas palustris (strain BisA53) GN=eno PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.796e-48
Identity = 107/197 (54.31%), Postives = 129/197 (65.48%), Query Frame = 3
Query:   90 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFXEAMKMGVEVYHHLKA 677
            I  +  R+I DSRGNPTVEVDV   DG V RAAVPSGASTG +EA+ELRDG    Y GKGV KAV  +N  +  AL G D   Q  ID  M+  LDGT N     K +LGANAIL +SLAV KA A    +PLY+++    G    +LPVP  N+INGG HA N +  QEFMI+PVGA SF EA++ G E++H LK+
Sbjct:    4 IVDIIGREILDSRGNPTVEVDVVLEDGAVGRAAVPSGASTGAHEAVELRDGDKGRYGGKGVQKAVEAINGELFDALGGMDAESQVQIDEVMI-ALDGTPN-----KARLGANAILGISLAVAKAAAESYDMPLYRYV---GGTSARMLPVPMMNIINGGMHADNPIDFQEFMIMPVGADSFSEALRCGAEIFHTLKS 191          
The following BLAST results are available for this feature:
BLAST of FC930110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RHOSK2.141e-4855.33Enolase OS=Rhodobacter sphaeroides (strain KD131 /... [more]
ENO_RHOS42.141e-4855.33Enolase OS=Rhodobacter sphaeroides (strain ATCC 17... [more]
ENO_RHOS12.141e-4855.33Enolase OS=Rhodobacter sphaeroides (strain ATCC 17... [more]
ENO_PROM12.141e-4851.76Enolase OS=Prochlorococcus marinus (strain NATL1A)... [more]
ENO_PECCP2.141e-4856.28Enolase OS=Pectobacterium carotovorum subsp. carot... [more]
ENO_METMP2.141e-4855.84Enolase OS=Methanococcus maripaludis GN=eno PE=3 S... [more]
ENO_METM72.141e-4855.84Enolase OS=Methanococcus maripaludis (strain C7 / ... [more]
ENO_ACTP72.141e-4856.28Enolase OS=Actinobacillus pleuropneumoniae serotyp... [more]
ENO_ACTP22.141e-4856.28Enolase OS=Actinobacillus pleuropneumoniae serotyp... [more]
ENO_RHOP52.796e-4854.31Enolase OS=Rhodopseudomonas palustris (strain BisA... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34003H06EF PostHarvC1 Citrus clementina cDNA clone C34003H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930110 ID=FC930110; Name=FC930110; organism=Citrus clementina; type=EST; length=680bp
GAATCCAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATC
TTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGT
CAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCG
ACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGT
GCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGA
TTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCA
TTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGAC
AACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTG
CAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCT
GCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCC
GAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGT
CATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTA
TGATTCTTCCTGTAGGAGCTTCCTCTTTCNAAGAAGCCATGAAGATGGGT
GTAGAAGTATATCACCATCTGAAGGCTGTG
back to top