FC930112

Overview
NameFC930112
Unique NameFC930112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.009e-24
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 1 
Query:  307 ELRGLDLQTGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            EL   D Q        I+ ATN F   N++GEGGFG VYKG+L  G  IAVK+LS KS QG+ EF+NE+  ++ LQH +LV+L G C++G + +LIYE+ +NT+L
Sbjct:  321 ELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSL 425

HSP 2 Score: 29.6462 bits (65), Expect = 2.009e-24
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 3 
Query:  651 RLKLDWPXRHNICIGIARGLAY 716
            R+ LDW  R+ I  G+ARGL Y
Sbjct:  435 RMILDWETRYRIISGVARGLLY 456
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.426e-24
Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 1 
Query:  298 SERELRGLDLQTGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            ++ E   +   +  F    ++ AT+HF + NK+GEGGFG VYKG+L+DG  IAVK+LS  ++QG  EF NE   ++ LQH +LVKL G  IEG + LL+YE+L +T+L
Sbjct:  318 NKHENENISTDSMKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSL 425

HSP 2 Score: 28.1054 bits (61), Expect = 4.426e-24
Identity = 14/34 (41.18%), Postives = 21/34 (61.76%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL + +F P +   +L+W  R+ I  G+ARGL Y
Sbjct:  424 SLDKFIFDPIQGN-ELEWEIRYKIIGGVARGLLY 456
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.428e-24
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 1 
Query:  316 GLDLQTGS---FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            G D+ T     F  + I+AATN F   NK+G+GGFG VYKG L+ G  +AVK+LS  S QG +EF NE+  ++ LQH +LVKL G C+EG + +L+YE++ N +L
Sbjct:  303 GNDITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSL 407

HSP 2 Score: 30.4166 bits (67), Expect = 4.428e-24
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 3 
Query:  651 RLKLDWPXRHNICIGIARGLAY 716
            ++KLDW  R+ I  GIARG+ Y
Sbjct:  417 KMKLDWTRRYKIIGGIARGILY 438
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 9.754e-24
Identity = 53/116 (45.69%), Postives = 74/116 (63.79%), Query Frame = 1 
Query:  283 RPKYTSERELRGLDLQTGS---FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            R  Y +     G D+ T        R I+ AT+ F  +NKIG+GGFG VYKG L+DGT +AVK+LS  S QG  EF NE+  ++ LQH +LV+L G C++G + +L+YEY+ N +L
Sbjct:  303 RKSYYTPSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSL 418

HSP 2 Score: 28.4906 bits (62), Expect = 9.754e-24
Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL   LF P + + +LDW  R+ I  G+ARG+ Y
Sbjct:  417 SLDYFLFDPAK-KGQLDWTRRYKIIGGVARGILY 449
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.754e-24
Identity = 51/108 (47.22%), Postives = 77/108 (71.30%), Query Frame = 1 
Query:  304 RELRGLDLQTGS--FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            ++ + +DL T S  F L+ I++AT++F   NK+G+GGFG VYKG+L +GT IAVK+LS  S QG  EF NE+  ++ LQH +LV+L G  ++G + LL+YE++ N +L
Sbjct:  313 KQKQEMDLPTESVQFDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSL 420

HSP 2 Score: 30.4166 bits (67), Expect = 9.754e-24
Identity = 17/34 (50.00%), Postives = 20/34 (58.82%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL   LF P + R +LDW  R NI  GI RG+ Y
Sbjct:  419 SLDYFLFDPTK-RNQLDWTMRRNIIGGITRGILY 451
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.762e-24
Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1 
Query:  316 GLDLQTGSFTL--RQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            G D+ T S  L  R I+AATN F   NKIG+GGFG VYKG  ++GT +AVK+LS  S QG+ EF NE+  ++ LQH +LV+L G  I G + +L+YEY+ N +L
Sbjct:  315 GDDITTESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSL 418

HSP 2 Score: 29.261 bits (64), Expect = 9.762e-24
Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL   LF P +   +LDW  R+ +  GIARG+ Y
Sbjct:  417 SLDYFLFDPAKQN-QLDWTRRYKVIGGIARGILY 449
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.268e-23
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1 
Query:  277 CFRPKYTSERELRGL--DLQTGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            C R K   E EL  +  + ++  F L+ I+AAT +F   NK+G GGFG VYKG+L +GT IAVK+LS  S QG  EF NE+  ++ LQH +LV+L G  ++G + LL+YE++ N +L
Sbjct:  324 CKRRKQKQEIELPIVLNEAESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSL 440

HSP 2 Score: 30.8018 bits (68), Expect = 1.268e-23
Identity = 17/34 (50.00%), Postives = 20/34 (58.82%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL   LF P + R +LDW  R NI  GI RG+ Y
Sbjct:  439 SLDYFLFDPNK-RNQLDWTVRRNIIGGITRGILY 471
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.795e-23
Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 1 
Query:  328 QTGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            +T  F    I+AATN F  +NK+G GGFG VYKG L  G  +A+K+LS  S QG  EF NE+  ++ LQH +L KL G C++G + +L+YE++ N +L
Sbjct:  331 ETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSL 428

HSP 2 Score: 30.8018 bits (68), Expect = 2.795e-23
Identity = 17/34 (50.00%), Postives = 21/34 (61.76%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL   LF  E+ R+ LDW  R+ I  GIARG+ Y
Sbjct:  427 SLDYFLFDNEKRRV-LDWQRRYKIIEGIARGILY 459
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.157e-23
Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 1 
Query:  277 CFRPKYTSERELRGLDLQTGS----FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            C R K     E++  D  T +    F+ + I+AAT+ F  +N IG GGFG VY+G L+ G  +AVK+LS  S QG  EF NE   +S LQH +LV+L G C+EG + +L+YE++ N +L
Sbjct:  308 CRRKKSYKTTEVQATDEITTTHSLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSL 426

HSP 2 Score: 31.187 bits (69), Expect = 6.157e-23
Identity = 17/34 (50.00%), Postives = 21/34 (61.76%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL   LF P +   +LDW  R+NI  GIARG+ Y
Sbjct:  425 SLDYFLFDPAKQG-ELDWTRRYNIIGGIARGILY 457
[Close]
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.037e-22
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 1 
Query:  340 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLE 627
            FTL  I+ AT  +     IGEGGFG VY+G L DG  +AVK  SA S QG REF NE+  +SA+QH +LV L G C E +Q +L+Y ++ N +LL+
Sbjct:  585 FTLEYIELATEKYKTL--IGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLD 678

HSP 2 Score: 36.965 bits (84), Expect = 1.037e-22
Identity = 18/34 (52.94%), Postives = 21/34 (61.76%), Query Frame = 3 
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL   L+G    R  LDWP R +I +G ARGLAY
Sbjct:  675 SLLDRLYGEPAKRKILDWPTRLSIALGAARGLAY 708
The following BLAST results are available for this feature:
BLAST of FC930112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CRK41_ARATH2.009e-2449.52Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK26_ARATH4.426e-2447.22Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK19_ARATH4.428e-2448.57Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK10_ARATH9.754e-2445.69Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CRK18_ARATH9.754e-2447.22Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK15_ARATH9.762e-2450.96Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK17_ARATH1.268e-2346.15Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK25_ARATH2.795e-2346.94Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK35_ARATH6.157e-2343.70Putative cysteine-rich receptor-like protein kinas... [more]
NORK_PEA1.037e-2250.00Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]

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Properties
Property NameValue
Genbank descriptionC34003H08EF PostHarvC1 Citrus clementina cDNA clone C34003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930112 ID=FC930112; Name=FC930112; organism=Citrus clementina; type=EST; length=716bp
ATTGAGGAGGAAGCTGGTGGAGTTGGTAAACCAATTGTGAAACCATTTTC
TGCTGTCGTGACCAATGGGACCATGGATATCCGTCTCTATTGGGCAGGGA
AAGGGACAACTGAAATTCCTGAGAGAGGAGTTTATGGTCCTCTCATATCG
GCTATTTCTCTTCATAACCCTGATTTCGAAGGAAGCAGTGGCATATCAGT
AGGCACCGTGCTCGGAATTGTAGCGGCTGCAGCAGTTGTGATAATCCTAG
TTGTGGGTATCCTTTGGTGGAAGGGCTGTTTTAGACCAAAATATACATCG
GAACGAGAGCTGAGGGGTCTAGACTTGCAAACTGGTTCTTTTACCTTGAG
GCAAATTAAAGCTGCCACAAACCACTTTGATGTTGCTAACAAGATTGGTG
AAGGTGGTTTTGGCCCTGTTTACAAGGGCCTTTTGGCAGATGGCACTCTA
ATTGCTGTCAAGCAGCTTTCTGCCAAATCAAAGCAAGGAAATAGAGAGTT
CGTTAATGAGATTGGCACGATTTCTGCTTTGCAACACCCTCATCTTGTAA
AGCTTTATGGATGTTGCATTGAAGGAAATCAATTGTTATTGATATACGAG
TACTTGGAAAACACAGCCTTGCTAGAGCTTTGTTTGGTCCTGAAGAGCAT
CGGTTGAAGTTGGATTGGCCAANCAGACATAATATTTGCATCGGTATAGC
TAGAGGTTTAGCTTAT
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