FC930112

Overview
NameFC930112
Unique NameFC930112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 46/117 (39.32%), Postives = 75/117 (64.10%), Query Frame = 1
Query:  337 SFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLELCLVLKSIG-*SWIGQXDII 684
            +F    ++ AT  F  + K+G+GG G VYKG+L DG ++AVK+L   +++   +F NE+  IS +QH +LV+L GC IEG + LL+YEY+ N +L ++  +  ++   SW  + +II
Sbjct:  305 NFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNII 421          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.941e-18
Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 1
Query:  289 KYTSERELRGLDLQTGSFTLRQIK-----AATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLEL 630
            K   E+E   +++ T    LR++K      ATN F  A+ IG GGFG V+K  L DG+ +A+K+L   S QG+REF+ E+ T+  ++H +LV L G C  G + LL+YE+++  +L E+
Sbjct:  804 KIEKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEV 922          

HSP 2 Score: 25.7942 bits (55), Expect = 4.941e-18
Identity = 15/36 (41.67%), Postives = 17/36 (47.22%), Query Frame = 3
Query:  615 SLARALFGPE--EHRLKLDWPXRHNICIGIARGLAY 716
            SL   L GP   E R  L W  R  I  G A+GL +
Sbjct:  918 SLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCF 953          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.996e-18
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 1
Query:  340 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            F    ++ AT++F     +G+GG G V+ G+L +G  +AVK+L   ++    EF NE+  IS +QH +LVKL GC IEG + LL+YEY+ N +L
Sbjct:  303 FKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSL 396          

HSP 2 Score: 28.4906 bits (62), Expect = 4.996e-18
Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 3
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            SL + LF   + ++ L+W  R NI +G A GLAY
Sbjct:  395 SLDQFLFDESQSKV-LNWSQRLNIILGTAEGLAY 427          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.437e-18
Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 1
Query:  343 TLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            +L  I  +T+ F+ AN IG GGFG VYK  L DGT +A+K+LS  + Q +REF  E+ T+S  QHP+LV L G C   N  LLIY Y++N +L
Sbjct:  732 SLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSL 824          

HSP 2 Score: 24.6386 bits (52), Expect = 6.437e-18
Identity = 11/19 (57.89%), Postives = 11/19 (57.89%), Query Frame = 3
Query:  660 LDWPXRHNICIGIARGLAY 716
            LDW  R  I  G A GLAY
Sbjct:  838 LDWKTRLRIARGAAEGLAY 856          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.099e-17
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 1
Query:  328 QTGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQL-SAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLEN 612
            Q   F+LR+++ A++ F   N +G GGFG VYKG LADGTL+AVK+L   ++  G  +F  E+  IS   H +L++L G C+   + LL+Y Y+ N
Sbjct:  286 QLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 381          

HSP 2 Score: 30.8018 bits (68), Expect = 1.099e-17
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  660 LDWPXRHNICIGIARGLAY 716
            LDWP R  I +G ARGL+Y
Sbjct:  398 LDWPTRKRIALGSARGLSY 416          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.110e-17
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 1
Query:  337 SFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTL----------IAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            SFT  ++K AT +F   + IGEGGFG V+KG L + TL          IAVK+L+ +  QG+RE++ EI  +  L HP+LVKL G C+E    LL+YE+++  +L
Sbjct:   54 SFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSL 158          

HSP 2 Score: 23.8682 bits (50), Expect = 1.110e-17
Identity = 13/36 (36.11%), Postives = 18/36 (50.00%), Query Frame = 3
Query:  609 KHSLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            K SL   LF    +   L W  R N+ +  A+GLA+
Sbjct:  155 KGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAF 190          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.843e-17
Identity = 41/97 (42.27%), Postives = 63/97 (64.95%), Query Frame = 1
Query:  340 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTL-IAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLE 627
            F+  +IKAAT +FD +  +G GGFG VY+G +  GT  +A+K+ +  S+QG  EF  EI  +S L+H HLV L G C E  +++L+Y+Y+ +  + E
Sbjct:  524 FSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMRE 620          

HSP 2 Score: 27.7202 bits (60), Expect = 1.843e-17
Identity = 12/19 (63.16%), Postives = 12/19 (63.16%), Query Frame = 3
Query:  660 LDWPXRHNICIGIARGLAY 716
            L W  R  ICIG ARGL Y
Sbjct:  630 LPWKQRLEICIGAARGLHY 648          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  265 WWKGCFRPKYTSERELR------GLDLQ------------TGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLE 627
            WW+   R +  + R+ +      GL LQ            T  F+ R+++ AT++F+    IG+GG G VYKG+L DG  +AVK+ +   +   +EF+NE+  +S + H H+VKL GCC+E    +L+YE++ N  L +
Sbjct:  399 WWRKLLRKRRMTNRKRKFFKRNGGLLLQQQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQ 537          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 40/106 (37.74%), Postives = 71/106 (66.98%), Query Frame = 1
Query:  313 RGLDLQTGS-FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLE 627
            RG ++Q+   F+ ++++ AT++F++   +G+GG G VYKG+L DG ++AVK+     +    EF+NE+G +S + H ++VKL GCC+E    +L+YE++ N  L +
Sbjct:  399 RGGNVQSSKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFK 504          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 1
Query:  337 SFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            SF    +K ATN+F+ + K+G GG+G V+KG L+DG  IA+K+L    K+   E  NEI  IS  QH +LV+L GCC       ++YE+L NT+L
Sbjct:  318 SFEYSTLKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSL 412          
The following BLAST results are available for this feature:
BLAST of FC930112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CRK1_ARATH3.295e-1839.32Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
BRL2_ARATH4.941e-1839.50Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
CRK42_ARATH4.996e-1842.55Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
PSKR1_DAUCA6.437e-1849.46Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
SERK1_ARATH1.099e-1742.71Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
BIK1_ARATH1.110e-1743.81Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
FERON_ARATH1.843e-1742.27Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
WAKLL_ARATH2.136e-1734.53Putative wall-associated receptor kinase-like 13 O... [more]
WAKLI_ARATH2.136e-1737.74Wall-associated receptor kinase-like 22 OS=Arabido... [more]
CRK43_ARATH2.136e-1745.26Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC34003H08EF PostHarvC1 Citrus clementina cDNA clone C34003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930112 ID=FC930112; Name=FC930112; organism=Citrus clementina; type=EST; length=716bp
ATTGAGGAGGAAGCTGGTGGAGTTGGTAAACCAATTGTGAAACCATTTTC
TGCTGTCGTGACCAATGGGACCATGGATATCCGTCTCTATTGGGCAGGGA
AAGGGACAACTGAAATTCCTGAGAGAGGAGTTTATGGTCCTCTCATATCG
GCTATTTCTCTTCATAACCCTGATTTCGAAGGAAGCAGTGGCATATCAGT
AGGCACCGTGCTCGGAATTGTAGCGGCTGCAGCAGTTGTGATAATCCTAG
TTGTGGGTATCCTTTGGTGGAAGGGCTGTTTTAGACCAAAATATACATCG
GAACGAGAGCTGAGGGGTCTAGACTTGCAAACTGGTTCTTTTACCTTGAG
GCAAATTAAAGCTGCCACAAACCACTTTGATGTTGCTAACAAGATTGGTG
AAGGTGGTTTTGGCCCTGTTTACAAGGGCCTTTTGGCAGATGGCACTCTA
ATTGCTGTCAAGCAGCTTTCTGCCAAATCAAAGCAAGGAAATAGAGAGTT
CGTTAATGAGATTGGCACGATTTCTGCTTTGCAACACCCTCATCTTGTAA
AGCTTTATGGATGTTGCATTGAAGGAAATCAATTGTTATTGATATACGAG
TACTTGGAAAACACAGCCTTGCTAGAGCTTTGTTTGGTCCTGAAGAGCAT
CGGTTGAAGTTGGATTGGCCAANCAGACATAATATTTGCATCGGTATAGC
TAGAGGTTTAGCTTAT
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