FC930112

Overview
NameFC930112
Unique NameFC930112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.384e-17
Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  295 TSERELRGLDLQTGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLE 609
            T E+ LR L       T   +  ATN F     +G GGFG VYK  L DG+++A+K+L   + QG+REF+ E+ TI  ++H +LV L G C  G + LL+YEY++
Sbjct:  839 TFEKPLRKL-------TFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMK 936          

HSP 2 Score: 26.5646 bits (57), Expect = 2.384e-17
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  660 LDWPXRHNICIGIARGLAY 716
            L+W  R  I IG ARGLA+
Sbjct:  956 LNWAARKKIAIGAARGLAF 974          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.416e-17
Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 1
Query:  340 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLS-AKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLEN 612
            F+LR++  AT  F   N +G+G FG +YKG LAD TL+AVK+L+  ++K G  +F  E+  IS   H +L++L G C+   + LL+Y Y+ N
Sbjct:  263 FSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 354          

HSP 2 Score: 33.4982 bits (75), Expect = 2.416e-17
Identity = 17/34 (50.00%), Postives = 20/34 (58.82%), Query Frame = 3
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            S+A  L    E    LDWP R +I +G ARGLAY
Sbjct:  356 SVASCLRERPEGNPALDWPKRKHIALGSARGLAY 389          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 51/127 (40.16%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  289 KYTSERELRGLDLQTGSFTLRQIK-----AATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLELCLVLKSIG 654
            K+TS RE   ++L      LR++       ATN F   + +G GGFG VYK  L DG+++A+K+L   S QG+REF  E+ TI  ++H +LV L G C  G + LL+YEY++  +L ++    K IG
Sbjct:  854 KFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIG 980          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.138e-17
Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 1
Query:  328 QTGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQL-SAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLEN 612
            Q   F+LR+++ AT+ F   N +G GGFG VYKG LADGTL+AVK+L   ++  G  +F  E+  IS   H +L++L G C+   + LL+Y Y+ N
Sbjct:  289 QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 384          

HSP 2 Score: 27.335 bits (59), Expect = 3.138e-17
Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 3
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            S+A  L      +L L W  R  I +G ARGL+Y
Sbjct:  386 SVASCLRERPPSQLPLAWSIRQQIALGSARGLSY 419          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.155e-17
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  340 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLEN 612
            FTLR ++ ATN F   N +GEGG+G VY+G L +GT +AVK+L     Q  +EF  E+  I  ++H +LV+L G CIEG   +L+YEY+ +
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNS 261          

HSP 2 Score: 22.3274 bits (46), Expect = 3.155e-17
Identity = 12/34 (35.29%), Postives = 15/34 (44.12%), Query Frame = 3
Query:  615 SLARALFGPEEHRLKLDWPXRHNICIGIARGLAY 716
            +L + L G       L W  R  I  G A+ LAY
Sbjct:  263 NLEQWLHGAMRQHGNLTWEARMKIITGTAQALAY 296          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 1
Query:  331 TGSFTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLE 627
            T  F  R+++ AT +F +   +GEGG G VYKG+L DG ++AVK+     +    EF+NE+  +S + H ++VKL GCC+E +  +L+YE++ N  L E
Sbjct:  418 TRVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFE 516          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 38/96 (39.58%), Postives = 64/96 (66.67%), Query Frame = 1
Query:  340 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLE 627
            F+ ++++ AT++F +   +G+GG G VYKG+L DG+++AVK+     +    EF+NEI  +S + H ++VKL GCC+E    +L+YEY+ N  L +
Sbjct:  417 FSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFK 512          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 6.825e-17
Identity = 46/86 (53.49%), Postives = 55/86 (63.95%), Query Frame = 1
Query:  364 ATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTAL 621
            +TN FD AN IG GGFG VYK  L DG  +A+K+LS    Q  REF  E+ T+S  QHP+LV L G C   N  LLIY Y+EN +L
Sbjct:  730 STNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSL 815          

HSP 2 Score: 20.7866 bits (42), Expect = 6.825e-17
Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 3
Query:  660 LDWPXRHNICIGIARGLAY 716
            L W  R  I  G A+GL Y
Sbjct:  829 LKWKTRLRIAQGAAKGLLY 847          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 1
Query:  340 FTLRQIKAATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLE 627
            FT R+I  ATN+F   N IG GGFG V+K +L DGT+ A+K+    + +G  + +NE+  +  + H  LV+L GCC++    LLIYE++ N  L E
Sbjct:  351 FTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFE 446          
BLAST of FC930112 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 50/127 (39.37%), Postives = 74/127 (58.27%), Query Frame = 1
Query:  289 KYTSERELRGLDLQTGSFTLRQIK-----AATNHFDVANKIGEGGFGPVYKGLLADGTLIAVKQLSAKSKQGNREFVNEIGTISALQHPHLVKLYGCCIEGNQLLLIYEYLENTALLELCLVLKSIG 654
            K+TS RE   ++L      LR++       ATN F   + +G GGFG VYK  L DG+++A+K+L   S QG+REF  E+ TI  ++H +LV L G C  G + LL+YEY++  +L ++    K  G
Sbjct:  854 KFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTG 980          
The following BLAST results are available for this feature:
BLAST of FC930112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
BRL1_ARATH2.384e-1741.90Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
SERK5_ARATH2.416e-1742.39Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
BRI1_SOLLC2.789e-1740.16Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
SERK2_ARATH3.138e-1743.75Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y2296_ARATH3.155e-1746.15Probable receptor-like protein kinase At2g42960 OS... [more]
WAKLJ_ARATH3.643e-1740.40Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLA_ARATH3.643e-1739.58Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
PSKR1_ARATH6.825e-1753.49Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
WAKLQ_ARATH1.060e-1642.71Wall-associated receptor kinase-like 20 OS=Arabido... [more]
BRI1_SOLPE1.060e-1639.37Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC34003H08EF PostHarvC1 Citrus clementina cDNA clone C34003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930112 ID=FC930112; Name=FC930112; organism=Citrus clementina; type=EST; length=716bp
ATTGAGGAGGAAGCTGGTGGAGTTGGTAAACCAATTGTGAAACCATTTTC
TGCTGTCGTGACCAATGGGACCATGGATATCCGTCTCTATTGGGCAGGGA
AAGGGACAACTGAAATTCCTGAGAGAGGAGTTTATGGTCCTCTCATATCG
GCTATTTCTCTTCATAACCCTGATTTCGAAGGAAGCAGTGGCATATCAGT
AGGCACCGTGCTCGGAATTGTAGCGGCTGCAGCAGTTGTGATAATCCTAG
TTGTGGGTATCCTTTGGTGGAAGGGCTGTTTTAGACCAAAATATACATCG
GAACGAGAGCTGAGGGGTCTAGACTTGCAAACTGGTTCTTTTACCTTGAG
GCAAATTAAAGCTGCCACAAACCACTTTGATGTTGCTAACAAGATTGGTG
AAGGTGGTTTTGGCCCTGTTTACAAGGGCCTTTTGGCAGATGGCACTCTA
ATTGCTGTCAAGCAGCTTTCTGCCAAATCAAAGCAAGGAAATAGAGAGTT
CGTTAATGAGATTGGCACGATTTCTGCTTTGCAACACCCTCATCTTGTAA
AGCTTTATGGATGTTGCATTGAAGGAAATCAATTGTTATTGATATACGAG
TACTTGGAAAACACAGCCTTGCTAGAGCTTTGTTTGGTCCTGAAGAGCAT
CGGTTGAAGTTGGATTGGCCAANCAGACATAATATTTGCATCGGTATAGC
TAGAGGTTTAGCTTAT
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