FC930115

Overview
NameFC930115
Unique NameFC930115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 430.639 bits (1106), Expect = 4.381e-120
Identity = 206/224 (91.96%), Postives = 218/224 (97.32%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            ++TFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKANV+YEKIVR TCR+IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHL++RPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP IP +YL
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 228          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 430.639 bits (1106), Expect = 4.381e-120
Identity = 206/224 (91.96%), Postives = 217/224 (96.88%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP +P +YL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYL 224          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 430.254 bits (1105), Expect = 5.722e-120
Identity = 207/223 (92.83%), Postives = 217/223 (97.31%), Query Frame = 3
Query:   93 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            ETFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETCTKTNLVMVFGEITTKANV+YEKIVRDTCRNIGF+S+DVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKP IP +YL
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 225          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 430.254 bits (1105), Expect = 5.722e-120
Identity = 206/224 (91.96%), Postives = 217/224 (96.88%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            METFLFTSESVNEGHPDKLCDQISDA+LDACL+QDPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY+N+ GA VP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP IP +YL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 224          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 430.254 bits (1105), Expect = 5.722e-120
Identity = 207/224 (92.41%), Postives = 218/224 (97.32%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            ME+FLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKANV+YEKIVR+TCR IGF+SDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGAKLTEVRKNGTC WLRPDGKTQVTVEY+NENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKP IP +YL
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCREIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 224          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 429.869 bits (1104), Expect = 7.473e-120
Identity = 204/223 (91.48%), Postives = 218/223 (97.76%), Query Frame = 3
Query:   93 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            ETFL+TSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVR+TCRNIGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT+EY+N+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKP IP +YL
Sbjct:    4 ETFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYFNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYL 226          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 429.869 bits (1104), Expect = 7.473e-120
Identity = 207/224 (92.41%), Postives = 216/224 (96.43%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVR TCR+IGFVSDDVGLDAD C VLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY NENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP IP +YL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 224          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 1.665e-119
Identity = 206/224 (91.96%), Postives = 217/224 (96.88%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+++YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY+NENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP IP +YL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADIDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 224          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 2.174e-119
Identity = 205/224 (91.52%), Postives = 216/224 (96.43%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKP +P +YL
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYL 224          
BLAST of FC930115 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 2.174e-119
Identity = 205/224 (91.52%), Postives = 218/224 (97.32%), Query Frame = 3
Query:   90 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPGIP*EYL 761
            ++TFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKA+V+YEKIVR TCR+IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHLS+RPEEIGAGDQGHMFGYA+DETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP IP +YL
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 228          
The following BLAST results are available for this feature:
BLAST of FC930115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_ATRNU4.381e-12091.96S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK2_CATRO4.381e-12091.96S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_PHALU5.722e-12092.83S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK2_VITVI5.722e-12091.96S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK2_BRAJU5.722e-12092.41S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK_MEDFA7.473e-12091.48S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK2_POPTR7.473e-12092.41S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK5_VITVI1.665e-11991.96S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK2_ELAUM2.174e-11991.52S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK2_ATRNU2.174e-11991.52S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionC34003H11EF PostHarvC1 Citrus clementina cDNA clone C34003H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930115 ID=FC930115; Name=FC930115; organism=Citrus clementina; type=EST; length=763bp
GTCGCCATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCA
ATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTT
TTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTG
ATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGAT
AGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTT
TGGAGAGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTG
ACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCT
GATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGC
CCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTG
GTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTT
ATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGA
GGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACAC
AAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGA
GTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGA
TGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGGTATTCCCT
GAGAGTACCTTGA
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