FC930130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930130 vs. ExPASy Swiss-Prot
Match: PSB4_DROME (Proteasome subunit beta type-4 OS=Drosophila melanogaster GN=Prosbeta7 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25 Identity = 65/204 (31.86%), Postives = 108/204 (52.94%), Query Frame = 1 Query: 178 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELM----------------------------RNKFDPLWNSLVLGGVKN-GQKYLGMVSMIGVNFEDSHVATGLGNHLARPILRDEWHENLSYE--DGVKLLEKCMRVLLYRDRSAVNKAADSKITEEGTNISQPYALKNVW 696 TGTSV+ ++Y G+++AAD SYGS RY+++ER+ + K+ LLG SG+ +D Q + RN+D+ M R++ +PL+ +V+GGV N G YL V + G ++ED VATG HLA P++R++ ++ + + +L+ CM VL YRD +++ + G + P+ + W Sbjct: 56 TGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTVGVCSVNGCGVEGPFQVNENW 259
BLAST of FC930130 vs. ExPASy Swiss-Prot
Match: PSB4_PIG (Proteasome subunit beta type-4 (Fragment) OS=Sus scrofa GN=PSMB4 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 36/75 (48.00%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 148 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELM 372 PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L +++ Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMV 116
BLAST of FC930130 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 53/183 (28.96%), Postives = 83/183 (45.36%), Query Frame = 1 Query: 181 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-------DELMRNKFDPLWNSLVLGGVKNGQKY-----------------LGMVSMIGVNFEDSHVATGLGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKAADSKITEEG 657 GT+ V L K+G+++AAD S G+ I K+V +I I +H + +G++ D L+R L + + + +L + NG KY L V M+G ED++ A G G A IL E+ E +S DG+KL K + V + RD + IT++G Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDG 192
BLAST of FC930130 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 51/183 (27.87%), Postives = 83/183 (45.36%), Query Frame = 1 Query: 181 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELMRNKFDPLWNSL-------VLGGVKNGQKY-----------------LGMVSMIGVNFEDSHVATGLGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKAADSKITEEG 657 GT+ V + KDG+++AAD S G+ I ++V +I I +H + +G++ D L+R L + + + +L + NG KY L V M+G ED + G G A IL E+ +NL+ E+G+KL K + + RD + + IT+EG Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEG 192 The following BLAST results are available for this feature:
BLAST of FC930130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930130 ID=FC930130; Name=FC930130; organism=Citrus clementina; type=EST; length=710bpback to top |