FC930139 | Citrus Genome Database

Overview


Name	FC930139
Unique Name	FC930139
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	731

Libraries


Library Name	Type
PostHarvC1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.875e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.591 bits (366), Expect = 2.613e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 1.860e-20
Identity = 48/56 (85.71%), Postives = 54/56 (96.43%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 1.860e-20
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.979e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.5153 bits (236), Expect = 2.420e-20
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.420e-20
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.979e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.5153 bits (236), Expect = 2.420e-20
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.420e-20
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.173e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 96.2857 bits (238), Expect = 3.149e-20
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 23.0978 bits (48), Expect = 3.149e-20
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT +DY  ++  + HLV
Sbjct:   51 EDGRTLSDYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.173e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 96.2857 bits (238), Expect = 3.149e-20
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 23.0978 bits (48), Expect = 3.149e-20
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT +DY  ++  + HLV
Sbjct:   51 EDGRTLSDYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.532e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 94.7449 bits (234), Expect = 4.097e-20
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 4.097e-20
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.532e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 4.097e-20
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 23.0978 bits (48), Expect = 4.097e-20
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT +DY  ++  + HLV
Sbjct:   51 EDGRTLSDYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.05 bits (362), Expect = 7.601e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.5153 bits (236), Expect = 5.330e-20
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 23.0978 bits (48), Expect = 5.330e-20
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT +DY  ++  + HLV
Sbjct:   51 EDGRTLSDYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.05 bits (362), Expect = 7.601e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.5153 bits (236), Expect = 5.330e-20
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 23.0978 bits (48), Expect = 5.330e-20
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT +DY  ++  + HLV
Sbjct:   51 EDGRTLSDYNIQKESTLHLV 70

[Close]

BLAST of FC930139 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.05 bits (362), Expect = 7.601e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTL GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.5153 bits (236), Expect = 5.330e-20
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLRMEGRS 687
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAG+QL  +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 23.0978 bits (48), Expect = 5.330e-20
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  669 EDGRTFADYTFRRNHS-HLV 725
            EDGRT +DY  ++  + HLV
Sbjct:   51 EDGRTLSDYNIQKESTLHLV 70

The following BLAST results are available for this feature:

BLAST of FC930139 vs. ExPASy Swiss-Prot

BLAST of FC930139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ACECL	6.875e-35	96.05	Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1	[more]
UBIQ_TRYCR	8.979e-35	97.37	Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1	[more]
UBIQ_ACACA	8.979e-35	97.37	Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1	[more]
UBIQ_GEOCY	1.173e-34	96.05	Ubiquitin OS=Geodia cydonium PE=3 SV=1	[more]
UBIQ_CAEEL	1.173e-34	96.05	Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 ...	[more]
UBIQ_EUPEU	1.532e-34	96.05	Ubiquitin OS=Euplotes eurystomus PE=3 SV=1	[more]
UBIQ_AGLNE	1.532e-34	96.05	Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1	[more]
UBIQ_XENLA	2.000e-34	96.05	Ubiquitin OS=Xenopus laevis PE=1 SV=1	[more]
UBIQ_SPOFR	2.000e-34	96.05	Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1	[more]
UBIQ_RAT	2.000e-34	96.05	Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C34004B12EF PostHarvC1 Citrus clementina cDNA clone C34004B12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC930139 ID=FC930139; Name=FC930139; organism=Citrus clementina; type=EST; length=731bp
GATCGGGTTATTCGATATTCTCAACAAATCTCTCCAATTCTCTCGCTAAG
AAACTTTTAAAAGATGCAGATCTTCGTGAAAACCCTAGCCGGCAAGACCA
TTACTCTCGAAGTCGAGAGCTCCGACACCATCGACAACGTCAAGGCCAAG
ATCCAAGACAAGGAAGGAATCCCTCCGGACCAGCAGCGTCTGATCTTCGC
CGGAAAACAGCTCGAAGACGGCCGCACCTTGGCCGATTACAATATCCAAA
AGGAATCGACGCTTCATCTGGTGCTTCGTCTCCGTGGAGGCATGCAGATC
TTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTTGAGAGCTC
CGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTC
CGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAGGACGGC
CGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTTCACCTCGT
GCTTCGTCTCCGTGGGGGCATGCAGATATTCGTCAAAACCCTAACGGGAA
AGACGATTACCCTCGAAGTCGAGAGCTCCGACACGATCGACAACGTCAAG
GCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAGCGTTTGAT
CTTCGCTGGNCAGCAGCTGAGGATGGAAGGACGTTCGCGGATTACACATT
CAGAAGGAATCACTCTCATCTGGTTTGCGTC