FC930146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_STAS1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 66/218 (30.28%), Postives = 116/218 (53.21%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL-GPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQGEAVK 647 + + E+ G + LA S++ +A G +GQ+C+ C R ++H+ +Y VL++ V + K + +G+ E T +GP+ + + IE I S+ GK+ GG ++ G FV+PTI+ ++D I++EE+F PV+ +K + FEE ++I N GL+ ++ T + EN W+ D G + +N A +G FGG ++ G K Sbjct: 282 RVIAEMGGKDAIVVDKDIDTDLAAESIVSSAFGFSGQKCSACSRAIVHKDVYDEVLEKAVALTKNLTVGN-TENNTYMGPVINQKQFDKIKNYIE-IGSKEGKLKQGGGTDDATGYFVEPTIIANLKSSDQIMQEEIFGPVVGFVKGKDFEELLEIANDTDYGLTGAVITNNREN---WIEAVESYDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAK 494
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_BACLD (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rocA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 60/211 (28.44%), Postives = 115/211 (54.50%), Query Frame = 3 Query: 9 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + E+ G + +LA +S+ +A G AGQ+C+ R ++HE +Y VL +++++ + K+G+P +GP+ S IE I + G+++ GG +S+G F++PTI ++ P A +++EE+F PV+ K +F+EA+++ N+ GL+ ++ T++ ++I + G + N GA +G FGG ++ G Sbjct: 285 IAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIE-IGKEEGRLVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINR--AKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSG 492
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_BACSU (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus subtilis GN=rocA PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22 Identity = 63/213 (29.58%), Postives = 115/213 (53.99%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQG 635 + + E+ G + LA S++++A G +GQ+C+ R +IH+ +Y V+++ V + K + +G+P + T +GP+ S K IE KS+ GK+L GG +S+G F+QPTI ++ A +++EE+F PV+ + K + F+ ++I N+ GL+ ++ T++ +I + G + N GA +G FGG + G Sbjct: 282 RVIAEMGGKDTVLVDKDADLDLAASSIVYSAFGYSGQKCSAGSRAVIHQDVYDEVVEKAVALTKTLTVGNPEDPDTYMGPVIHEASYNKVMKYIEIGKSE-GKLLAGGEGDDSKGYFIQPTIFADVDENARLMQEEIFGPVVAICKARDFDHMLEIANNTEYGLTGALLTKNRAHIER--AREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSG 491
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: LADH_METM5 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0090 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22 Identity = 69/234 (29.49%), Postives = 114/234 (48.72%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGERLQG---EAVKQEVILGSIHATLDLHN 695 K LEL GNN KLA +S + + AGQ C + ++L+ E + +T +++ K++ +G+PL+ T +GPL +PES E I+ ++GG++LIGG+ + + + P ++ I + K E F PVL ++K + EEAV I N+ GL + +FT K + G + +N + FGG + G E +K V T+ +HN Sbjct: 236 KVALELGGNNPMIVLKDSDIKLAAKSAVKSKFLNAGQVCISVGQVLVEEEVLETFTKHVIEETKKLILGNPLDTKTDIGPLISPESALRIENLIKKSVNEGGEVLIGGN---RQNSLISPAVINIDENNILSKIETFGPVLPILKVKDSEEAVSIANNSKYGLQAGVFTNDINKAMKI--ADSLEYGGIMINSSPTFRKDNMPFGGVKKSGLGREGIKYTVEEMCETKTIVIHN 464
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_OCEIH (1-pyrroline-5-carboxylate dehydrogenase OS=Oceanobacillus iheyensis GN=rocA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 54/178 (30.34%), Postives = 104/178 (58.43%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIK--SQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 527 + + E+ G + LA S++ +A G +GQ+C+ C R +IHES+Y V+++ V++ K + +G+P E + + ++K F+K + I+ Q G+++ GG +++G FV PTI ++ P A I++EE+F PV+ K ++F+E + I N+ GL+ ++ + + EN+ Sbjct: 282 RIVAEMGGKDTIIVDESADLDLAAESIVHSAFGFSGQKCSACSRAVIHESVYDEVIEKSVELAKTLTVGNPTEDNVYMASV---VNQKQFDKIKDYIEVGKQEGELVFGGETDDNKGFFVHPTIFKDLDPKARIMQEEIFGPVVAFSKAKSFDELLDIANNTEYGLTGAVISNNRENL 456
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 64/212 (30.19%), Postives = 105/212 (49.53%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGERLQG 635 K LEL GN +AV+ L A +GQ C R+L+ + IY + + +++++GD GT GPL + + E +++ S+G KI+IGG F +PT++ ++S + KEE+F PV +++F+T E+A++I N GL++ IFT S + W + G+V VN E+ FGG + G Sbjct: 293 KVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQR--SWRVFEALEYGLVGVNEGLISTEV-APFGGVKQSG 501
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_STAAW (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=rocA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 63/220 (28.64%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN---IKSQGGKILIGGSVIESEGNFVQPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQGEAVK 647 + + E+ G + +A +++ +A G +GQ+C+ C R ++H+ +Y VL++ + + K++ +G+ ++ T +GP+ ++K F+K I+N I + GK+ GG +S+G FV+PTI+ + D I++EE+F PV+ +K F+EA+++ N GL+ ++ T + E+ K + D G + +N A +G FGG ++ G K Sbjct: 282 RVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVD-NTYMGPV---INKKQFDK-IKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEF--DVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAK 494
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_STAAT (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rocA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 63/220 (28.64%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN---IKSQGGKILIGGSVIESEGNFVQPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQGEAVK 647 + + E+ G + +A +++ +A G +GQ+C+ C R ++H+ +Y VL++ + + K++ +G+ ++ T +GP+ ++K F+K I+N I + GK+ GG +S+G FV+PTI+ + D I++EE+F PV+ +K F+EA+++ N GL+ ++ T + E+ K + D G + +N A +G FGG ++ G K Sbjct: 282 RVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVD-NTYMGPV---INKKQFDK-IKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEF--DVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAK 494
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_STAAS (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=rocA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 63/220 (28.64%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN---IKSQGGKILIGGSVIESEGNFVQPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQGEAVK 647 + + E+ G + +A +++ +A G +GQ+C+ C R ++H+ +Y VL++ + + K++ +G+ ++ T +GP+ ++K F+K I+N I + GK+ GG +S+G FV+PTI+ + D I++EE+F PV+ +K F+EA+++ N GL+ ++ T + E+ K + D G + +N A +G FGG ++ G K Sbjct: 282 RVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVD-NTYMGPV---INKKQFDK-IKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEF--DVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAK 494
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ROCA_STAAR (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=rocA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 63/220 (28.64%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN---IKSQGGKILIGGSVIESEGNFVQPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIG-GAFGGERLQGEAVK 647 + + E+ G + +A +++ +A G +GQ+C+ C R ++H+ +Y VL++ + + K++ +G+ ++ T +GP+ ++K F+K I+N I + GK+ GG +S+G FV+PTI+ + D I++EE+F PV+ +K F+EA+++ N GL+ ++ T + E+ K + D G + +N A +G FGG ++ G K Sbjct: 282 RVIAEMGGKDAIVVDENIDTDMAAEAIVTSAFGFSGQKCSACSRAIVHKDVYDEVLEKSIKLTKELTLGNTVD-NTYMGPV---INKKQFDK-IKNYIEIGKEEGKLEQGGGTDDSKGYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEF--DVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAK 494 The following BLAST results are available for this feature:
BLAST of FC930146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930146 ID=FC930146; Name=FC930146; organism=Citrus clementina; type=EST; length=704bpback to top |