FC930146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: GABD1_MYCPA (Succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium paratuberculosis GN=gabD1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 58/210 (27.62%), Postives = 103/210 (49.05%), Query Frame = 3 Query: 9 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGERLQG 635 +LEL G++ AV++ + A V GQ C +R ++H IY +D+ V+ K +K+GDP + T +GPL T R K +++ + G + GG ++ G F PT+V +I+ + EE+F PV + + +EA++I N+ GL S+ +T +++ + +N + + E+G FGG + G Sbjct: 230 VLELGGSDPFIVMPSADLDEAVKTAVTARVQNNGQSCIAAKRFIVHTDIYDAFVDKFVEQMKALKVGDPTDPATDVGPLATESGRDEIAKQVDDAVAAGATLRCGGKPLDGPGWFYPPTVVTDITKDMALYTEEVFGPVASMYRAADIDEAIEIANATTFGLGSNAWTNDAAEQQRFIDDIEAGQVFIN-GMTVSYPELG--FGGVKRSG 436
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: MMSA_MOUSE (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 90 AAVGTAGQRCTTCRR-LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIE----SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIP 584 AA G AGQRC +L+ E+ + L +LVD K +++ + G LGPL TP++++ I++ +G IL+ G I+ GNFV PTI+ + P+ KEE+F PVL V++ +T +EA+KI N P G ++IFT + K+ H D G V VN+P Sbjct: 308 AAFGAAGQRCMALSTAILVGEA--KKWLPELVDRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRRIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGATARKY--AHMVDVGQVGVNVP 474
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: GABD_ECOLI (Succinate-semialdehyde dehydrogenase [NADP+] OS=Escherichia coli (strain K12) GN=gabD PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 61/212 (28.77%), Postives = 98/212 (46.23%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNIPTNGAEIGGAFGGERLQG 635 K LEL GN AV L + AGQ C RL + + +Y ++L ++ IGD L+ G +GPL ++ E+ I + +G +++ GG E GNF QPTI V++ A + KEE F P+ + +F+ + + N GL++ + R +F+ +G + GIV +N E+ FGG + G Sbjct: 251 KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR-VG-EALEYGIVGINTGIISNEV-APFGGIKASG 459
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: YNEI_ECOLI (Aldehyde dehydrogenase-like protein yneI OS=Escherichia coli (strain K12) GN=yneI PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 50/170 (29.41%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 3 KCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 509 KC+LEL G++ +LAV++ + GQ C +R +I E I ++ V +K+GDP ++ LGP+ + R +E +QG ++L+GG + GN+ PT++ ++P +EE+F PV + + E A+++ N GLS++IFT Sbjct: 230 KCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFGLSATIFT 399
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: ASTD_HAHCH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Hahella chejuensis (strain KCTC 2396) GN=astD PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 60/211 (28.44%), Postives = 106/211 (50.24%), Query Frame = 3 Query: 12 LELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLDQLVDVYKQVKIGD-PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK-WLGPHGSDTGIVNVNIPTNGAEIGGAFGGERLQG 635 LE+ GNN K AV LF+A +AGQRCT RRLL+ ++ Q LD+L+ +++G + +G + + +R + ++GG+IL+ +E + + P +++++ ++ EE F P+L V++++ F+ A+++ N GL++ + + S + + WL GIVN N P GA FGG G Sbjct: 246 LEMGGNNPLIIAPPYDLKGAVHHTLFSAFVSAGQRCTCARRLLVPDTAEGQAFLDELIAAAANLQVGRYDADPQPFMGGVISLRARDQMLAAQNKLAAEGGRILLEMRSLEENASLLSPGVIDVTDVQELPDEEHFGPMLQVLRYRDFDHALELANKTGFGLAAGLISDSRDLYDRFWLEVR---AGIVNWNKPLTGASSAAPFGGVGASG 453
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: IOLA_LISMH (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=iolA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 61/172 (35.47%), Postives = 95/172 (55.23%), Query Frame = 3 Query: 72 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIE-SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLGPHGSDTGIVNVNI 581 V +V+ AA G+AG+RC C + + E I L+ L K VKIG+ L+ G LGP+ E++K IE +G K+ + G SEG+FV PTI+E ++ I K+E+FAPVL V++ + +EAV++ N + IFT + + I + D G++ VN+ Sbjct: 269 VTNVISAAFGSAGERCMACAVVTVEEDIADEFLEALRTAAKNVKIGNGLDDGVFLGPVIREENQKRTIAYIEKGVEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTIWKDEIFAPVLSVIRVKNLQEAVRVANLSEFANGACIFTNNAKAIRYF--REKIDAGMLGVNL 438
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTU (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis GN=gabD1 PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 3 Query: 9 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 512 +LEL G++ AV + + V GQ C +R ++H IY +D+ V +++GDP + T +GPL T + R K +E+ + G I GG ++ G F PT++ +IS + EE+F PV V + +EAV+I N+ GL S+ +TR Sbjct: 229 VLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTR 397
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gabD1 PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 3 Query: 9 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 512 +LEL G++ AV + + V GQ C +R ++H IY +D+ V +++GDP + T +GPL T + R K +E+ + G I GG ++ G F PT++ +IS + EE+F PV V + +EAV+I N+ GL S+ +TR Sbjct: 229 VLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTR 397
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBP (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gabD1 PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 3 Query: 9 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 512 +LEL G++ AV + + V GQ C +R ++H IY +D+ V +++GDP + T +GPL T + R K +E+ + G I GG ++ G F PT++ +IS + EE+F PV V + +EAV+I N+ GL S+ +TR Sbjct: 229 VLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTR 397
BLAST of FC930146 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBO (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis GN=gabD1 PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 53/169 (31.36%), Postives = 85/169 (50.30%), Query Frame = 3 Query: 9 LLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILIGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 512 +LEL G++ AV + + V GQ C +R ++H IY +D+ V +++GDP + T +GPL T + R K +E+ + G I GG ++ G F PT++ +IS + EE+F PV V + +EAV+I N+ GL S+ +TR Sbjct: 229 VLELGGSDPFIVMPSADLDAAVSTAVTGRVQNNGQSCIAAKRFIVHADIYDDFVDKFVARMAALRVGDPTDPDTDVGPLATEQGRNEVAKQVEDAAAAGAVIRCGGKRLDRPGWFYPPTVITDISKDMALYTEEVFGPVASVFRAANIDEAVEIANATTFGLGSNAWTR 397 The following BLAST results are available for this feature:
BLAST of FC930146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930146 ID=FC930146; Name=FC930146; organism=Citrus clementina; type=EST; length=704bpback to top |