FC930151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_RAT (ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus GN=Atp5d PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.077e-17 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 152 PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 P + P +++ F P V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A E V +D +D + L + +LS A + +AE QI ++ + AL AL Sbjct: 31 PAAGPGQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGTTTKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEALVKAL 167
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_HUMAN (ATP synthase subunit delta, mitochondrial OS=Homo sapiens GN=ATP5D PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 164 PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 P++++ F P + V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A EAV +D +D + L + +L + +AE QI ++ + AL AL Sbjct: 35 PNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEALVKAL 167
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_NEUCR (ATP synthase subunit delta, mitochondrial OS=Neurospora crassa GN=atp-16 PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 7.688e-16 Identity = 44/135 (32.59%), Postives = 78/135 (57.78%), Query Frame = 2 Query: 158 SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 ++ K+ ++ LP+ + +++V V +PA +G+MGVL HVP+I +LKPG++ V + K+YF+S GFA + S I AVE ++ V+ +AE + +S + + AEAQ+ ++V +L + L Sbjct: 30 AVADKIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVEVIEESGSNKQYFLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAEAQKIVSGGGSQQDIAEAQVELEVLESLQAVL 164
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_CAEEL (ATP synthase subunit delta, mitochondrial OS=Caenorhabditis elegans GN=F58F12.1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.473e-14 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 164 PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 562 P +L + F P + S V V VP G +GVL HVPTI LKPGV+SV T ++ FVSSG ++ + ++A E + +++ID S + L + Q+ S +++ +AEAQI +V AL A T Sbjct: 28 PEELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEGTVQRLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAEL-DAAQRASGEGSEVARAEAQIRAEVAEALIKAAT 160
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPD_SCHPO (ATP synthase subunit delta, mitochondrial OS=Schizosaccharomyces pombe GN=atp16 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.571e-13 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 2 Query: 170 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 559 KL ++ LPY + V V +PA G+MG+L HVP I LKPGV+SV D + K KYF+S GFA ++ I EA ++ S+ + L + +++S+ + AEA + V V +L AL Sbjct: 30 KLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSKYFISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNSSDEGV-AAEAAVRVSVLESLVRAL 159
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPE_OLTVI (ATP synthase epsilon chain, chloroplastic OS=Oltmannsiellopsis viridis GN=atpE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12 Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 2 Query: 218 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 517 KEVD +I+P +TGQMGVL H P I L GV+ V D + V GFA + N + ++ EA + IDP ++ A Q L AT EK EA Sbjct: 17 KEVDEIILPTNTGQMGVLSNHAPLITALDIGVMLVRTQKDWESVAVMGGFALVKQNQIT-VLVNEAESKETIDPQEAEEAFATAKQTLEQATGQKEKVEA 115
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPE_MAGSA (ATP synthase epsilon chain OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.796e-12 Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 170 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 517 K+ V P A L + +VDMV+VP + G G L H P I ++PGV+ +HDG + FV+ GFA ++ + ++A EA+P+ ++ + + + L A +D +KA A Sbjct: 4 KIQFELVSP-AKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVSSSVFVAGGFAEVNEERIT-VLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHA 118
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPE_RHOCS (ATP synthase epsilon chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11 Identity = 35/106 (33.02%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 209 LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT---KKYFVSSGFAFIHANSVADIIAVEAVPIDQI---DPSLVQKGLAEFNQKLSSATTDLEK 508 L ++ V MV+VP + G GVLPGH P I ++PG++ V+ N T ++ FV+ GFA + ++ ++A EA +D + D + ++K +++ + + AT+D+E+ Sbjct: 16 LVSQPVAMVVVPGADGLFGVLPGHAPMIVTVRPGIIDVYGDNQTTVSRRIFVAGGFAEV-TDTRCTVLAEEASDLDALLKSDTAALEKQISDLREDIEDATSDVER 120
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPE_RHORU (ATP synthase epsilon chain OS=Rhodospirillum rubrum GN=atpC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.447e-11 Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 209 LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSA 556 L ++ V+MV+VP + G G +P H P ++ ++PGV+S ++G ++ FV+ GFA + ++A EA + + V+ L + +L AT++ EKAEA + AL +A Sbjct: 16 LFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQRRIFVAGGFAEV-TEDRCTVLADEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEAAQAKAIAEALLAA 131
BLAST of FC930151 vs. ExPASy Swiss-Prot
Match: ATPE_RHORT (ATP synthase epsilon chain OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpC PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.447e-11 Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 2 Query: 209 LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSA 556 L ++ V+MV+VP + G G +P H P ++ ++PGV+S ++G ++ FV+ GFA + ++A EA + + V+ L + +L AT++ EKAEA + AL +A Sbjct: 16 LFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQRRIFVAGGFAEV-TEDRCTVLADEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEAAQAKAIAEALLAA 131 The following BLAST results are available for this feature:
BLAST of FC930151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930151 ID=FC930151; Name=FC930151; organism=Citrus clementina; type=EST; length=573bpback to top |