FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_TREPS (Adenine phosphoribosyltransferase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33
Identity = 75/161 (46.58%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  219 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            A +  AIR   DFPK GI++ DIT +L++   FR  +D  VE Y+D++++ VA IE+RGFIF  P A  +G   + +RK  KLPG+  S  YSLEYGK  +E+H   V AG R L+ DDL+ATGGTL+AA  +L   G  VV    V+ LP L+  E +G+
Sbjct:   15 AALDRAIRKRIDFPKKGILYYDITGVLMNAAVFRYCLDQMVEFYRDEHVTAVAAIESRGFIFAAPFADRMGIPLILVRKAGKLPGDTYSCSYSLEYGKATVEVHKSDVVAGARVLLTDDLIATGGTLNAARTMLRAGGAEVVGFFAVVGLPFLRYHELIGD 175          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_TREPA (Adenine phosphoribosyltransferase OS=Treponema pallidum GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33
Identity = 75/161 (46.58%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  219 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGE 701
            A +  AIR   DFPK GI++ DIT +L++   FR  +D  VE Y+D++++ VA IE+RGFIF  P A  +G   + +RK  KLPG+  S  YSLEYGK  +E+H   V AG R L+ DDL+ATGGTL+AA  +L   G  VV    V+ LP L+  E +G+
Sbjct:   15 AALDRAIRKRIDFPKKGILYYDITGVLMNAAVFRYCLDQMVEFYRDEHVTAVAAIESRGFIFAAPFADRMGIPLILVRKAGKLPGDTYSCSYSLEYGKATVEVHKSDVVAGARVLLTDDLIATGGTLNAARTMLRAGGAEVVGFFAVVGLPFLRYHELIGD 175          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_LACH4 (Adenine phosphoribosyltransferase OS=Lactobacillus helveticus (strain DPC 4571) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33
Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 3
Query:  228 SSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            S  I  + DFP  GI+F+DIT +L D + +R       E  K +   V+ G EARGFI G P+A  +G  FVP RKP KLP EV    Y LEYG + +EMH  A++ G+R ++ DDL+AT GTL A+  L+E +G  +V  A  IELP+LKGRE L
Sbjct:    6 SKYIASVKDFPNKGIVFRDITPILQDGELYRIATHELAEYAKSRKADVIVGPEARGFIVGCPVATELGLGFVPARKPHKLPREVERASYDLEYGSNSLEMHKDAIKPGQRVVLCDDLMATAGTLRASKELIENLGGKLVGAAFYIELPDLKGREKL 161          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CAMJR (Adenine phosphoribosyltransferase OS=Campylobacter jejuni (strain RM1221) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CAMJJ (Adenine phosphoribosyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CAMJD (Adenine phosphoribosyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_CAMJ8 (Adenine phosphoribosyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.743e-33
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  234 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STACT (Adenine phosphoribosyltransferase OS=Staphylococcus carnosus (strain TM300) GN=apt PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.889e-33
Identity = 74/157 (47.13%), Postives = 103/157 (65.61%), Query Frame = 3
Query:  246 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLS 716
            + D+PK G+ F+DITT++ + +A+    D  VE  ++K + +V G EARGFI G P+A ++G  F P+RK  KLP EVI  EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ A I+L+E +G  VV  A +IEL  L G + L     LS
Sbjct:   10 VQDWPKEGVDFKDITTIMDNGEAYGYATDQIVEFAREKEVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGIVVGIAFIIELKYLHGIDKLDGYDVLS 166          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_FRASN (Adenine phosphoribosyltransferase OS=Frankia sp. (strain EAN1pec) GN=apt PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.889e-33
Identity = 75/160 (46.88%), Postives = 100/160 (62.50%), Query Frame = 3
Query:  219 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLG 698
            A + + +R + DFPKPG++F+DIT LL    AF   +    +  +    + +AGIEARGF+   P+A  +GA  VP+RK  KLPG   SE Y+LEYG  V+E+H  AV  GER LIVDD++ATGGT +AA  LL   G  VV  A ++EL  L GR+  G
Sbjct:   15 AVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPVADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVLMELTFLSGRDRTG 174          
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_STRGB (Adenine phosphoribosyltransferase OS=Streptomyces galbus GN=apt PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33
Identity = 73/157 (46.50%), Postives = 99/157 (63.06%), Query Frame = 3
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETL 695
            ++S IR + D+P+PG+MF+DIT LL D  AF    D      +    + V G+EARGFI G P+A+  G  F+P+RK  KLPG  +S+ Y LEYG   +E+H   + AG+R LIVDD++ATGGT  AAI+L+ R G  V   A ++EL  L GR  L
Sbjct:   11 LASRIRDVADYPEPGVMFKDITPLLADPVAFTALTDTLAAGRRRHPRTKVVGLEARGFILGAPVAVRAGLGFIPVRKAGKLPGATLSQAYDLEYGSAEIEVHAEDLAAGDRVLIVDDVLATGGTAEAAIQLIRRAGAEVCGLAVLMELGFLGGRARL 167          
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_TREPS3.743e-3346.58Adenine phosphoribosyltransferase OS=Treponema pal... [more]
APT_TREPA3.743e-3346.58Adenine phosphoribosyltransferase OS=Treponema pal... [more]
APT_LACH43.743e-3347.44Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_CAMJR3.743e-3347.44Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_CAMJJ3.743e-3347.44Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_CAMJD3.743e-3347.44Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_CAMJ83.743e-3347.44Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_STACT4.889e-3347.13Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_FRASN4.889e-3346.88Adenine phosphoribosyltransferase OS=Frankia sp. (... [more]
APT_STRGB6.385e-3346.50Adenine phosphoribosyltransferase OS=Streptomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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