FC930169

Overview
NameFC930169
Unique NameFC930169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SALPA (Adenine phosphoribosyltransferase OS=Salmonella paratyphi A GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  ++C
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL-EKQGITC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SALNS (Adenine phosphoribosyltransferase OS=Salmonella newport (strain SL254) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  ++C
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL-EKQGITC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SALEP (Adenine phosphoribosyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  ++C
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL-EKQGITC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SALDC (Adenine phosphoribosyltransferase OS=Salmonella dublin (strain CT_02021853) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  ++C
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL-EKQGITC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SALCH (Adenine phosphoribosyltransferase OS=Salmonella choleraesuis GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  ++C
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL-EKQGITC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_SALA4 (Adenine phosphoribosyltransferase OS=Salmonella agona (strain SL483) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 84/165 (50.91%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  ++C
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL-EKQGITC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_KLEP3 (Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae (strain 342) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44
Identity = 85/165 (51.52%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L  ERYKD  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  + C
Sbjct:   11 LKNSIQSIEDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKDAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRL-EKLGIHC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_KLEP7 (Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44
Identity = 85/165 (51.52%), Postives = 122/165 (73.94%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEKHYLSC 719
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +I+L  ERYKD  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G + L EK  + C
Sbjct:   11 LKNSIQSIEDYPKPGILFRDVTSLLEDPKAYALSIELLTERYKDAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRL-EKLGIHC 174
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_AERS4 (Adenine phosphoribosyltransferase OS=Aeromonas salmonicida (strain A449) GN=apt PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44
Identity = 80/153 (52.29%), Postives = 113/153 (73.86%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 683
            I ++I+ IPD+PKPGI+F+DIT+L+ + +AF+ TIDL  E Y+D+ I+ + G EARGFIFG P+A A+G  FVP+RKP KLP  VI E Y+LEYG D +++H  A+  G++ L+VDDL+ATGGT+ A ++L+ R G  V + A +I LP L G
Sbjct:    9 IEASIKTIPDYPKPGILFRDITSLIENAEAFKATIDLLAEHYRDQGITKIVGTEARGFIFGAPVAFAMGLGFVPVRKPGKLPRAVIEESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVADAAFIISLPSLGG 161
[Close]
BLAST of FC930169 vs. ExPASy Swiss-Prot
Match: APT_YERPS (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=apt PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.050e-43
Identity = 81/160 (50.62%), Postives = 115/160 (71.88%), Query Frame = 3 
Query:  225 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRETLGEK 704
            I  +I+ IPD+PK GI+F+D+T+LL + KA+  +I+L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G   L ++
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174
The following BLAST results are available for this feature:
BLAST of FC930169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALPA6.156e-4450.91Adenine phosphoribosyltransferase OS=Salmonella pa... [more]
APT_SALNS6.156e-4450.91Adenine phosphoribosyltransferase OS=Salmonella ne... [more]
APT_SALEP6.156e-4450.91Adenine phosphoribosyltransferase OS=Salmonella en... [more]
APT_SALDC6.156e-4450.91Adenine phosphoribosyltransferase OS=Salmonella du... [more]
APT_SALCH6.156e-4450.91Adenine phosphoribosyltransferase OS=Salmonella ch... [more]
APT_SALA46.156e-4450.91Adenine phosphoribosyltransferase OS=Salmonella ag... [more]
APT_KLEP36.156e-4451.52Adenine phosphoribosyltransferase OS=Klebsiella pn... [more]
APT_KLEP78.040e-4451.52Adenine phosphoribosyltransferase OS=Klebsiella pn... [more]
APT_AERS48.040e-4452.29Adenine phosphoribosyltransferase OS=Aeromonas sal... [more]
APT_YERPS1.050e-4350.63Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]

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Properties
Property NameValue
Genbank descriptionC34004E06EF PostHarvC1 Citrus clementina cDNA clone C34004E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930169 ID=FC930169; Name=FC930169; organism=Citrus clementina; type=EST; length=730bp
GACTTCTTAACTCTTCAAACCTCTCCCTTCGCTTTGCATCTCAAACGCAG
ACACGACTCTCTCCCTGGATCGCCGCTCCCTCCTCTGTTCGCCTACCGTT
GAACCGCTCGCAAAATTACAGAATTGCACTCCCTCCTCTGCATTCCACCG
TGAGTGGTGACTCGACGCAACCTCAACAAATGGCTTCAGCTGACGTAAAA
GCACAAGACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCC
AGACTTCCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTC
TTGATACCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTAC
AAGGACAAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTAT
ATTTGGGCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGA
GGAAACCTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTG
GAATATGGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGG
GGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGGGACCTTGT
CTGCTGCAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGT
GCATGCGTGATTGAACTGCCAGAGCTAAAGGGTCGGGAAACGCTGGGAGA
GAAACACTATTTGTCTTGTAGCTAAACTTG
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