FC930171
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_TRYCR (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma cruzi PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24 Identity = 77/215 (35.81%), Postives = 106/215 (49.30%), Query Frame = 3 Query: 9 IVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRW-HVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEIC-------DFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFE 629 IVS SNEY+ SYVL+ESSLFV ++I+ TCGTT LL ++P + V V + ++ F Q PH S +EE L +F F+ G D+ + VY N L M M GLDR + ++ S TE + IRK ++ D +F+PCGYS+N+I G TIH+TPED S+AS+E Sbjct: 69 IVSKESNEYIRSYVLTESSLFVMRDRIILITCGTTTLLNAVPFVLDAVSDVRGEVEWVSFMHKNYSFPWEQKGPHLSMAEEFNTLRTYF----PSGKPFIFGPVDSDHYFLFVYDDVIRPCETENDT-QLSMTMYGLDRTQTKHWFSDRFISTG--TETAAIRKATKLDKVADDSWKLHDLQFEPCGYSINTIRGAEYQTIHITPEDHCSFASYE 276
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_YEAST (S-adenosylmethionine decarboxylase proenzyme OS=Saccharomyces cerevisiae GN=SPE2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.149e-18 Identity = 74/249 (29.72%), Postives = 114/249 (45.78%), Query Frame = 3 Query: 9 IVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXV-----------RSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVY------TLEMCMTGLDRKRASVFYKTNESSAAMM---TEDSG--IRKILPKSEICD------------------FEFDPCGYSMNSIEGDA-VSTIHVTPEDGFSYASFEA 632 ++S + LD+++LSESSLFV+ +K+ +KTCGTT L + + V Y+R F+F Q H+++++EV L+ KF + ++ +G D + W++Y + + Y T E+ MT LD + AS F E+S + ED G + + K+ D F F PCGYS N I + T+HVTPE G+SYASFE+ Sbjct: 71 VLSMKKTKELDAFLLSESSLFVFDHKLTMKTCGTTTTLFCLEKLFQIVEQELSWAFRTTQGGKYKPFKVFYSRRCFLFPCKQAAIHQNWADEVDYLN----KFFDNGKSYSVGRNDKSNHWNLYVTETDRSTPKGKEYIEDDDETFEVLMTELDPECASKFVCGPEASTTALVEPNEDKGHNLGYQMTKNTRLDEIYVNSAQDSDLSFHHDAFAFTPCGYSSNMILAEKYYYTLHVTPEKGWSYASFES 315 The following BLAST results are available for this feature:
BLAST of FC930171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930171 ID=FC930171; Name=FC930171; organism=Citrus clementina; type=EST; length=695bpback to top |