FC930173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4) HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20 Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEAL---KKEKQALVIQLQKTNELLQNKPRRE 593 R + EQ+R+LE FE +LEP +K+QLAK LGLQPRQ+AIWFQN+RARWK+KQLERDY+ L+ F+ L S ++L K+ A ++ L+K + K +RE Sbjct: 118 RLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKRE 221
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 R + EQ++ LE FE E +LEP +K +LA+ LG+ PRQVA+WFQN+RARWK+KQLE D++ L+A ++ LA+ AL + L Q+ E LQ+K + SPS Sbjct: 89 RLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDK----ETSPS 190
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 R + EQ++ LE FE E +LEP +K +LA+ LG+ PRQVA+WFQN+RARWK+KQLE D++ L+A ++ LA+ AL + L Q+ E LQ+K + SPS Sbjct: 89 RLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDK----ETSPS 190
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.042e-20 Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRRED---QSPSERQCCGQVEGVNSMEKRLD 665 R + EQ+++LE FE +LEP +K+QLA+ LGLQPRQ+AIWFQN+RARWK+KQLE+DY+ L+ F+ L + + L+ Q L ++ L+N+ + E +E C + + +S RLD Sbjct: 88 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMG----LKNREQTESINLNKETEGSCSNRSDN-SSDNLRLD 210
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19 Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEAL---KKEKQALVIQL---QKTNELLQ-NKPRREDQSPSERQCCGQVEGVNSMEKRLD 665 R + EQ+R+LE FE +LEP +K+QLA+ LGLQPRQVAIWFQN+RARWK+KQLE+DY+ L+ + + + +AL K+ QA ++ L + +EL+ NK +E C + E NS E LD Sbjct: 133 RLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASELINLNK-------ETEASCSNRSE--NSSEINLD 255
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19 Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEAL---KKEKQALVIQL---QKTNELLQ-NKPRREDQSPSERQCCGQVEGVNSMEKRLD 665 R + EQ+R+LE FE +LEP +K+QLA+ LGLQPRQVAIWFQN+RARWK+KQLE+DY+ L+ + + + +AL K+ QA ++ L + +EL+ NK +E C + E NS E LD Sbjct: 127 RLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASELINLNK-------ETEASCSNRSE--NSSEINLD 249
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 7.654e-19 Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRRE 593 R EQ+++LE FE +LEP +K+QLAK LG+QPRQ+AIWFQN+RARWK++QLERDY+ L+ F +L S +L + L+ ++ L+NK E Sbjct: 90 RLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVM----ALKNKECNE 186
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.306e-18 Identity = 40/87 (45.98%), Postives = 65/87 (74.71%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQL 551 R + EQ+R+LE FE + +L+P +K ++A++L L PRQVA+WFQN+RARWK+KQ+ERD+ L++ + L +AL+++K AL ++ Sbjct: 68 RLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEI 154
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.306e-18 Identity = 40/87 (45.98%), Postives = 65/87 (74.71%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQL 551 R + EQ+R+LE FE + +L+P +K ++A++L L PRQVA+WFQN+RARWK+KQ+ERD+ L++ + L +AL+++K AL ++ Sbjct: 44 RLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEI 130
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.227e-18 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETR-LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 R + EQ+R+LE FE E R LEP +K +LA+ LG+ PRQVA+WFQN+RARWK+KQLE D++ L+A + L + AL + ++L Q+ E LQ + SP+ Sbjct: 85 RLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQVILLTEKLQANGKSPSPSPA 191 The following BLAST results are available for this feature:
BLAST of FC930173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930173 ID=FC930173; Name=FC930173; organism=Citrus clementina; type=EST; length=669bpback to top |