FC930173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.227e-18 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETR-LEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 R + EQ+R+LE FE E R LEP +K +LA+ LG+ PRQVA+WFQN+RARWK+KQLE D++ L+A + L + AL + ++L Q+ E LQ + SP+ Sbjct: 25 RLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRAALAADNESLRSQVILLTEKLQANGKSPSPSPA 131
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.909e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEAL 518 R S EQ+R+LE FE+ +LEP +K QLA+ LGLQPRQVAIWFQN+RARWK+KQLE+D++ L+ + + +AL Sbjct: 107 RLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDAL 182
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.909e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEAL 518 R S EQ+R+LE FE+ +LEP +K QLA+ LGLQPRQVAIWFQN+RARWK+KQLE+D++ L+ + + +AL Sbjct: 107 RLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDAL 182
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.105e-17 Identity = 50/112 (44.64%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQ--KTNELLQ--NKPRREDQSPSER 614 R + EQ+++LE FE +LE +KL+LA+ LGLQPRQ+AIWFQN+RAR K+KQLE+DY++L+ F +L E L+ + Q L Q+ K+ E ++ N + + S S+R Sbjct: 74 RLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKETEGSCSDR 185
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.200e-17 Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 3 Query: 306 QIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNEL 569 Q+R LE FE E RLEP +KL LA++LGLQP QVA+WFQN+RAR+K+KQLE D + L+A++ L + ++ L + Q L ++Q N L Sbjct: 76 QLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKLKTDWDILFVQNQTLKSKVQFLNRL 163
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.222e-16 Identity = 41/97 (42.27%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNK 581 R + Q+ SLE F+ E +L+ +K++L++ELGLQPRQ+A+WFQN+RARWK+KQLE+ Y ++L ++ + +EKQ L +++K LL+++ Sbjct: 81 RLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLY-------DSLRQEYDVVSREKQMLHDEVKKLRALLRDQ 170
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.084e-16 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPS 608 + +DEQ+ LE+ F +E +LE +K +LA ELGL PRQVA+WFQN+RARWK+K+LE +YN L+ + +N+ L+ E L QL +Q R + S Sbjct: 59 KLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSS 164
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16 Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNN-------LASRFEALKKEKQALVIQLQKTNELLQNKPRREDQS 602 + +DEQ+ LE F NE +LE +K ++A ELGL PRQVA+WFQN+RARWK+K+LE +Y L+ + +N L S+ L ++ +++K +E L+ P S Sbjct: 74 KLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSS 184
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRR 590 + SDEQ+R LE+ FE++ +LE +K +LA ELGL PRQVA+WFQN+RARWK+K++E +Y L+ + L E L QL + +Q +R Sbjct: 64 KLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKR 163
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana GN=ATHB-22 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-15 Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQL--------AKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQ 617 + + EQ++ LE F+ E +L P +K++L +KELGLQPRQ+A+WFQN++ARWK+KQLE Y +L F+ + +EK+ L +L + ++ RED S ++Q Sbjct: 74 KMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLY-------ESLRQEFDIVSREKELLQEELIQLKSMI-----REDSSCKKKQ 178 The following BLAST results are available for this feature:
BLAST of FC930173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930173 ID=FC930173; Name=FC930173; organism=Citrus clementina; type=EST; length=669bpback to top |