FC930173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQ 479 R SDEQ+ LEL F E +LE +K+ LA ELGL P+QVA+WFQN+RAR KSK LE +++ L+ Sbjct: 65 RLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLK 127
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQ 479 R SDEQ+ LEL F E +LE +K+ LA ELGL P+QVA+WFQN+RAR KSK LE +++ L+ Sbjct: 65 RLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLK 127
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELL 572 R SDEQ R LE+ F+ E +LE +K+QLA ELGL +QVA+WFQN+RAR KSK +E + F L S +A+ + L +L K E L Sbjct: 64 RLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEE-------FAKLRSAHDAVVLQNCHLETELLKLKERL 150
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELL 572 R SDEQ R LE+ F+ E +LE +K+QLA ELGL +QVA+WFQN+RAR KSK +E + F L S +A+ + L +L K E L Sbjct: 64 RLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEE-------FAKLRSAHDAVVLQNCHLETELLKLKERL 150
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: ATB52_ARATH (Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana GN=ATHB-52 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELL 572 R + +Q+R LE F +LEP KLQL+ +LGL RQVA+WFQNKRAR+K++ LE + LQ+ S L+ + Q L +L++ L Sbjct: 14 RLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQL 107
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQAL 539 R S +Q LE F L PR+K LA++LGL+PRQV +WFQN+RAR K KQ E D L+ L L+KE Q L Sbjct: 85 RLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQEL 167
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQAL 539 R S +Q LE F L PR+K LA++LGL+PRQV +WFQN+RAR K KQ E D L+ L L+KE Q L Sbjct: 85 RLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQEL 167
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQAL 539 R S EQ LE F+ + L P++K+ LAK+L L+PRQV +WFQN+RAR K KQ E D +L+ L L +E Q L Sbjct: 97 RLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQL 179
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQAL 539 R S EQ LE F+ + L P++K+ LAK+L L+PRQV +WFQN+RAR K KQ E D +L+ L L +E Q L Sbjct: 97 RLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQL 179
BLAST of FC930173 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 37/79 (46.84%), Postives = 47/79 (59.49%), Query Frame = 3 Query: 291 RFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKE 527 R S EQ LE F+ + L P++KL LAK+L L+PRQV +WFQN+RAR K KQ E D L+ L L+KE Sbjct: 180 RLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE 258 The following BLAST results are available for this feature:
BLAST of FC930173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930173 ID=FC930173; Name=FC930173; organism=Citrus clementina; type=EST; length=669bpback to top |