FC930174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_PYRSA (Preprotein translocase subunit secY (Fragment) OS=Pyrenomonas salina GN=secY PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 L LSRLG +IP+ GV+ +AF ++ N +++ L+ FSGGG +GI +LGIVP+INA IV QL P L+ LQK GEAGR+K Sbjct: 24 LVLSRLGTFIPVPGVDHDAFYQSISTNPIVTFLNIFSGGGFASIGIFALGIVPYINASIVIQLATTSIPNLEKLQKEEGEAGRQK 108
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_ANTSP (Preprotein translocase subunit secY OS=Antithamnion sp. GN=secY PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 39/85 (45.88%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 L L+R+GI+IP+ G++ + F + QN +++ L+ F+GGG +GI +LGIVP+I A I+ QLL ++ P L++LQK GE GR+K Sbjct: 18 LFLARVGIFIPISGIDHQTFNNTIQQNGIINFLNIFAGGGFSTIGIFALGIVPYIYASIIIQLLIKLIPYLENLQKEEGEIGRQK 102
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_GUITH (Preprotein translocase subunit secY OS=Guillardia theta GN=secY PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 2 Query: 434 LALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 + +SRLG ++P+ GV+ +AF ++ N L++ L+ FSGGG +G+ +LGIVP+INA I+ QL P L+ LQK GE GR+K Sbjct: 24 IVMSRLGTFLPIPGVDHDAFYQSIISNPLVNFLNVFSGGGFASIGVFALGIVPYINASIIVQLATNSIPSLEKLQKEEGELGRQK 108
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_CYACA (Preprotein translocase subunit secY OS=Cyanidium caldarium GN=secY PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 31/86 (36.05%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 431 YLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 ++AL RLG+++P+ G++++ F + N++ + L+ F +L + +LGI+P+INA I Q+L+ P L+ LQ GE G+KK Sbjct: 17 FIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPKLSVFALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKK 102
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_PSEAE (Preprotein translocase subunit secY OS=Pseudomonas aeruginosa GN=secY PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 446 RLGIYIPLGGVNREAFVGNLDQN--SLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 R+G +IP+ G+N + QN ++LS + FSGG + R+ I +LGI+P+I+A I+ QL+ I+P+L+ L K+ GE+GR+K Sbjct: 33 RIGAHIPVPGINPDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQLMTAISPQLEQL-KKEGESGRRK 114
BLAST of FC930174 vs. ExPASy Swiss-Prot
Match: SECY_AQUAE (Preprotein translocase subunit secY OS=Aquifex aeolicus GN=secY PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 446 RLGIYIPLGGVNREAFVGNLD--QNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQINPKLQDLQKRRGEAGRKK 688 RLG +IP+ G+N EA L + S+ + D FSGG +GRL + +LG++P+I+A I+ QLL P LQ L K G+ GR K Sbjct: 29 RLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYK 111 The following BLAST results are available for this feature:
BLAST of FC930174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930174 ID=FC930174; Name=FC930174; organism=Citrus clementina; type=EST; length=706bpback to top |