FC930187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 2.242e-67 Identity = 124/210 (59.05%), Postives = 154/210 (73.33%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ + EVHRK+I+ ++A YMR LME+ Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3) HSP 1 Score: 254.988 bits (650), Expect = 2.928e-67 Identity = 127/210 (60.48%), Postives = 155/210 (73.81%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME+ Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 3.824e-67 Identity = 126/210 (60.00%), Postives = 155/210 (73.81%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME+ Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3) HSP 1 Score: 253.832 bits (647), Expect = 6.522e-67 Identity = 126/210 (60.00%), Postives = 152/210 (72.38%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+KAYFKRYQVKYKRRR+GKTDY AR RL+ QDKNKYNTPKYR +VRFTNKDI QI A I GD+V+ +AYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L +D YEG E G+++ VE + + FRA LDVGL +TTTG +VF IPHS KRF G+ +S AEVHR +I+ GHV+ YM+ L E+ Sbjct: 5 KVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3) HSP 1 Score: 253.447 bits (646), Expect = 8.518e-67 Identity = 126/210 (60.00%), Postives = 155/210 (73.81%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAH+LP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME+ Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3) HSP 1 Score: 253.062 bits (645), Expect = 1.112e-66 Identity = 126/210 (60.00%), Postives = 154/210 (73.33%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ AEVHRK+I +VA YMR L+E+ Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLIEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.898e-66 Identity = 127/210 (60.48%), Postives = 156/210 (74.29%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKYNTPKYR VVRF+N+DIT Q+ + I GD +L +AYAHELP+YG++VGLTNYAAAYCTGLLLAR++L L +D Y G E TGE+++V+P E+ FR LDVGL++TTTG RVF I HS KRF GF +SK+ +A+VHR++I+ HVA YMR L E+ Sbjct: 5 KVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDITCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_AEDAE (60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.898e-66 Identity = 125/210 (59.52%), Postives = 155/210 (73.81%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+K YFKRYQV+++RRREGKTDY AR RLI QDKNKYNTPKYR +VR +N+DIT QI A I GD ++ +AY+HELPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D Y G + TGE+Y VEP ++ FR LDVGL +TTTG R+F IPHS KRF G+S ++K +AEVHR +I+ HVA YMRTL E+ Sbjct: 5 KVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKYRLIVRLSNRDITCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYTGCTDVTGEEYLVEPVDDGPGAFRCYLDVGLARTTTGARIFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEVHRAHIFGQHVADYMRTLEEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 251.906 bits (642), Expect = 2.478e-66 Identity = 125/210 (59.52%), Postives = 154/210 (73.33%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+KAYFKRYQV+++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE G++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME+ Sbjct: 5 KVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
BLAST of FC930187 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 4.228e-66 Identity = 126/210 (60.00%), Postives = 155/210 (73.81%), Query Frame = 2 Query: 83 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMED 709 K K+K YFKRYQVK++RRREGKTDY AR RL QDKNKYNTPKYR +VR +NKDIT QI A I GD V+ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARRVL L +D+ Y G E TGE+++VEP ++ FR LDVGL +TTTG RVF IPHS KRF G+S ++K +A+VHR +I+ HVA YMR+L E+ Sbjct: 5 KVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEE 214 The following BLAST results are available for this feature:
BLAST of FC930187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930187 ID=FC930187; Name=FC930187; organism=Citrus clementina; type=EST; length=709bpback to top |