FC930188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: CBPA_PSEE4 (Curved DNA-binding protein OS=Pseudomonas entomophila (strain L48) GN=cbpA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYD---LYGDEKGSP----------GFDAGHPGNQGG--YTYFTS--GGPGQSQFTSRPGEWQ 492 D YK+LGVE +A ++ I+ A+ KL+ +YHPD +K + A++KF E N AY++L D++KR +YD YG + G P G + G G +GG +F+S G G + F G Q Sbjct: 5 DYYKILGVEASADEKAIKAAYRKLARKYHPDVSKERDAEDKFKEANEAYEVLGDKDKRAEYDEIRKYGGQHGRPFQAPPGWQSRGGNGGGGGFEGGDFSDFFSSIFGARGGNPFGGGGGRQQ 126
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 184 YKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYG-DEKGSPGFDAGHPGNQGGY------TYFTSGG 450 Y +LGV A+ EI+KA+ K +L+YHPDKN ++ A EKF E + AY+ILSD EKR YD +G D G G PG G+ +F +GG Sbjct: 8 YDILGVPVTATDVEIKKAYRKCALKYHPDKNPSEEAAEKFKEASAAYEILSDPEKRDIYDQFGEDGLSGAGGAGGFPGGGFGFGDDIFSQFFGAGG 103
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNJ6A_XENLA (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-A PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 175 VDPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNK--AAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDAGHPGNQGGYTYFTSGGPGQSQFTSR 477 V+ Y+VLGV+RNAS +I+KA+ +L+L++HPDKN + A+ +F E+ AY++LSD +KR YD YG E + N+GG ++F P Q FT R Sbjct: 2 VEYYEVLGVQRNASADDIKKAYRRLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLT---------NRGGGSHFDE-APFQFGFTFR 94
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBHB (Chaperone protein dnaJ OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 37/84 (44.05%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDAGHPGNQGG 426 D Y+VLGV R+AS+R+I+KA+ +L++++HPD+N+ +++A +KF E+ AY+IL+D +K+ YD YG G G G GG Sbjct: 5 DFYEVLGVGRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAAFEQGGGFGGGGFGGG 88
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_TRIEI (Chaperone protein dnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 33/76 (43.42%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDAG 405 D Y++LGV R+A + E+++A+ +L+ +YHPD NK ++E+F EIN AY+ILSD E + ++D +G+ S G +G Sbjct: 4 DYYEILGVSRSADKEELKRAYRRLARKYHPDVNKEPGSEERFKEINRAYEILSDPEMKARFDRFGEAGVSGGAASG 79
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_RHISN (Chaperone protein dnaJ OS=Rhizobium sp. (strain NGR234) GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKKYDLYGD---EKGSPGFDAGH---PGNQGGYT 432 D Y+ LGV++NA ++E++ AF KL+++YHPD+N ++ A++ F EIN AY+ L D +KR YD YG E+G G G+ G+ GG++ Sbjct: 4 DLYETLGVKKNADEKELKSAFRKLAMKYHPDRNPGDQEAEKSFKEINEAYETLKDPQKRAAYDRYGHAAFEQGGMGAGFGNGFAGGSAGGFS 95
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_RHILE (Chaperone protein dnaJ (Fragment) OS=Rhizobium leguminosarum GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKN-KNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDAGHPGNQGGYTYFTSGG 450 D Y+ LGV ++A ++E++ AF KL++++HPDKN +K A+ KF EIN AY++L D +KR YD Y G F+ G G GG F GG Sbjct: 5 DFYETLGVAKSADEKELKSAFRKLAMKFHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYDRY----GHAAFEHGGMGGGGG--GFAGGG 90
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCMO (Chaperone protein dnaJ OS=Mycoplasma mobile GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 42/98 (42.86%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDAGHPGNQGGYTYFTSGGPGQSQFT 471 D Y++LG+ ++AS+ EI+KA+ L+ YHPD NK A+EKF EI AY+IL+D+ KR++Y+ +G P +AG G Q +T G G S F+ Sbjct: 4 DYYEILGLTKSASKDEIKKAYRTLAKTYHPDVNKETNAEEKFKEITEAYEILNDDVKREQYNQFGHAAFDP--NAGGFGGQNPFTN-AEGFSGFSDFS 98
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_IDILO (Chaperone protein dnaJ OS=Idiomarina loihiensis GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 39/91 (42.86%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 172 TVDPYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKKYDLYGDE------KGSPGFDAGHPGNQG 423 T D Y+VLGV ++A++R+I+KA+ +++++YHPD+ + +K + KF EI AY++LSD +KR+ YD YG E +G G AG G G Sbjct: 3 TQDFYQVLGVSKDANERDIKKAYKRMAMKYHPDRTEGDKDMEIKFKEIKQAYEVLSDPQKRQMYDQYGHEAFEQARQGGAGHGAGGFGGGG 93
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_HYPNA (Chaperone protein dnaJ OS=Hyphomonas neptunium (strain ATCC 15444) GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNK-NKAAQEKFAEINNAYDILSDEEKRKKYDLYGD---EKGSPGFDAGHP-GNQGG 426 D Y+VLGVER ++ ++ A+ KL+++YHPD+N + AA++KF E+ AY ILSD +KR YD YG E G G G P G QGG Sbjct: 5 DYYEVLGVERGVDEKALKSAYRKLAMKYHPDQNAGDTAAEDKFKEVGEAYAILSDPQKRAAYDRYGHGAFENG--GMGGGSPFGGQGG 90 The following BLAST results are available for this feature:
BLAST of FC930188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930188 ID=FC930188; Name=FC930188; organism=Citrus clementina; type=EST; length=669bpback to top |