FC930188

Overview
NameFC930188
Unique NameFC930188
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAR (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MRSA252) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAN (Chaperone protein dnaJ OS=Staphylococcus aureus (strain N315) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
[Close]
BLAST of FC930188 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:  178 DPYKVLGVERNASQREIQKAFHKLSLQYHPDKNKNKAAQEKFAEINNAYDILSDEEKRKKYDLYGDEKGSPGFDA-GHPGNQ-GGYTYFTSGG 450
            D Y+VLG+ ++AS+ EI+KA+ KLS +YHPD NK + A EKF EI+ AY++LSD+ KR  YD +G + G  GF   G  G+  GG++ F  GG
Sbjct:    5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD-GPQGFGGQGFNGSDFGGFSGFGGGG 96
The following BLAST results are available for this feature:
BLAST of FC930188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STAAS3.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAR3.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAN3.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAM3.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE3.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC3.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB3.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA93.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA83.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA33.245e-1749.46Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionC34004G01EF PostHarvC1 Citrus clementina cDNA clone C34004G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930188 ID=FC930188; Name=FC930188; organism=Citrus clementina; type=EST; length=669bp
GACCCCGTCGCTATTGTTATTAATTGTGATCTTTTTCATAACGCACTTCA
CTCCGTTCAATAATAAACCTCTAAAATCTGTAGTGAGATGCAAGGTGCAA
AAATGAAGGTTCGTTTCGCACTATCGATTTTTCTGTTTTCAACGCTTTTG
ATCTTCAACGCGAAAGCCAAAACCGTCGATCCGTACAAGGTTCTTGGTGT
TGAGCGGAATGCGAGCCAGCGTGAGATTCAAAAAGCTTTCCACAAGCTCT
CTCTTCAATATCACCCGGACAAGAACAAAAATAAGGCCGCTCAGGAGAAG
TTCGCTGAGATTAATAATGCATATGATATTTTATCTGATGAAGAGAAGAG
GAAAAAATATGATTTGTATGGGGATGAGAAGGGCAGTCCTGGATTTGATG
CTGGGCATCCTGGGAATCAAGGTGGGTATACATACTTCACAAGTGGTGGA
CCGGGACAAAGCCAGTTTACCTCTAGACCTGGTGAATGGCAGAATATGGG
GGGGCAGGGAAGTTCCCGGAGCTTTTCGTTTTCCTTTGGCGGTACTGGTG
GTTCAAGTTCATTTGGTTTTGGTCTAGATGATATCTTCTCTGACTTTTTT
GGCAGTAGTTTTGGAGGAGGACGCCAATTTGGTGGTTTTAGTGGTTCAAC
TGGTTCTCAGTCTCAATCT
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