FC930192

Overview
NameFC930192
Unique NameFC930192
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:4..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18
Identity = 54/168 (32.14%), Postives = 89/168 (52.98%), Query Frame = 3
Query:  213 FVNGKWKA--HGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            ++NG + +   G T  +INPA  + +ATV  A  ED +  +++     KIW  + A +R  ++R+  D LR++   L RL +++ GK L E    ++    D+ ++  GL   L GS IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   10 YINGGYTSATSGRTFETINPATGEVLATVQAAGREDVDRAVESAQRGQKIWAAMTAMERSRILRRAVDLLRQRNDELARLETLDTGKPLSETAAVDIVTGADVLEYYAGLIPALEGSQIPL-RDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: BETB_ECOSE (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=betB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18
Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  240 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETLFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: BETB_ECO8A (Betaine aldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18
Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  240 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L GS IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPL-RETLFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 48/176 (27.27%), Postives = 92/176 (52.27%), Query Frame = 3
Query:  186 GLSPETP-GCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            G S + P G ++NG+W     T  +++P+  + IA V  A  ++ +  +K+  EA K W ++P  ++GE++ ++ +   +    L  + +++ GK ++    G+V   I +  +  G + ++ G VIP+  P  +      P+GV G I  +N+P  + GW    AL  GNC++ K
Sbjct:   14 GKSVKQPIGLYINGEWHKSAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPT-GPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIK 188          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: IOLA2_OCEIH (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Oceanobacillus iheyensis GN=iolA2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 3
Query:  213 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            ++ G+W       T    NPA  + IA V  ++ ED    ++  +EA K W E+P PKR  ++ +    L E    L +L+++E GK   E  GEVQ  I+  +FA G    + G  + S            P+GV+G IT FNFP  V  W   +A+  GN  V K
Sbjct:   12 YIGGEWIESRTEKTEDVFNPATGEVIAQVPISTTEDVHHAIEVANEAFKTWKEVPVPKRARILFKYQQLLVEHWEELAKLITLENGKNYAEAYGEVQRGIENVEFATGAPSLMMGEQLASIATELESGVYRYPIGVIGGITPFNFPMMVPCWMFPMAIATGNTFVMK 178          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: IOLA1_OCEIH (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Oceanobacillus iheyensis GN=iolA1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 3
Query:  213 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            ++NGKW     G      NPA  + IATV  + +ED +  + A  E    W ++P P R   +      L++    L +++++E GK L +  GEVQ  I++ + A      + G  +PS     +    W  PLGVV  IT FNFP  V  W   +A+ CGN  V K
Sbjct:   12 YINGKWVDAKSGKQEVIPNPATGETIATVTISDVEDVDMAVAAAKEVFPEWSDIPVPNRTRYLLDYWKLLQDNKEELAKIITLENGKSLRDAQGEVQRGIEVVELATSTPSMMMGDALPSIAKG-IDGSIWRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLK 178          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 53/168 (31.55%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  213 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 53/168 (31.55%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  213 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 53/168 (31.55%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  213 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFK 176          
BLAST of FC930192 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 53/168 (31.55%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  213 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 707
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDLLRERNDELAALETLDTGKPLAETRAVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFK 176          
The following BLAST results are available for this feature:
BLAST of FC930192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
BETB_KLEP35.757e-1832.14Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]
BETB_ECOSE7.518e-1833.76Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO8A7.518e-1833.76Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
YLX7_SCHPO9.819e-1827.27Putative aldehyde dehydrogenase-like protein C922.... [more]
IOLA2_OCEIH9.819e-1832.93Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_OCEIH9.819e-1832.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEAE1.282e-1731.55Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEAB1.282e-1731.55Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA81.282e-1731.55Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA71.282e-1731.55Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]

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Properties
Property NameValue
Genbank descriptionC34004G05EF PostHarvC1 Citrus clementina cDNA clone C34004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930192 ID=FC930192; Name=FC930192; organism=Citrus clementina; type=EST; length=727bp
GGCTCTCTTTGATCTTCTTATTCAACAAGTAACCAAAACCTCTAATTCAT
TCCAACACACTTTCATGTGACATTGTCTTACATAACTAATCTTTTTTCAA
TCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAAAGATGGAAT
TTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGATCGGCTTAAGTCCAGAA
ACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGGCACATGGTCCTACTGT
CTCCTCTATCAATCCTGCTAACAATCAGAAAATTGCTACTGTTGTGGAGG
CTTCACTTGAGGATTATGAGGAAGGCATGAAAGCTTGCAGCGAAGCATCT
AAGATATGGATGGAACTTCCAGCTCCTAAGAGAGGGGAGGTTGTTAGACA
AATAGGTGATGCATTGAGAGAAAAACTGCATCATCTCGGCCGTCTTCTTT
CAATTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAAGTCCAAGAA
GTTATTGACATGTGTGATTTTGCTGTGGGTTTAAGCCGGCAACTTAATGG
ATCAGTAATACCTTCAGAACGTCCCAATCATATGATGTTAGAGACATGGA
ATCCTCTTGGGGTAGTTGGTGTCATTACAGCATTTAACTTCCCGTGTGCT
GTTCTTGGATGGAATGCATGCATTGCACTAGTCTGCGGCAACTGTGTTGT
TTGGAAAGTGCCCCCACACTCCTTTGA
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