FC930196

Overview
NameFC930196
Unique NameFC930196
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10237 contig Ccv1_Contig10237:9..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OYE3_YEAST (NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae GN=OYE3 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.343e-24
Identity = 69/191 (36.13%), Postives = 106/191 (55.50%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQD-YQPNGQAPISSTDK---PLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L  P  +G+  L+HR V+ PLTR R+ +  N+P    A +YY QR  + G ++I E T +S  A GY + PG W+ EQV  WK I  A+H      + Q+W +G  S  D    +G     ++D+     T Q +A   +  + +    L  D+I Q + D+  AA+N+I AG DG+E+H A+GYL++QF+
Sbjct:   17 LFEPIKIGNTQLAHRAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITEGTFISPQAGGYDNAPGIWSDEQVAEWKNIFLAIHDCQSFAWVQLWSLGWASFPDVLARDGLRYDCASDRVYMNATLQEKAKDANNLEHS----LTKDDIKQYIKDYIHAAKNSIAAGADGVEIHSANGYLLNQFL 203          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OYE2_YEAST (NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae GN=OYE2 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 9.675e-24
Identity = 63/187 (33.69%), Postives = 97/187 (51.87%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYN--NVP-QPHAILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L  P  +G+  L HR V+ PLTR R+ +  N+P +  A+ YY+QR  + G L+I E T  S  + GY + PG W++EQ++ W  I  A+H      + Q+W +G  +  D          S    +               P   +  DEI Q V ++  AA+N+I AG DG+E+H A+GYL++QF+
Sbjct:   17 LFKPIKIGNNELLHRAVIPPLTRMRAQHPGNIPNRDWAVEYYAQRAQRPGTLIITEGTFPSPQSGGYDNAPGIWSEEQIKEWTKIFKAIHENKSFAWVQLWVLGWAAFPDTLARDGLRYDSASDNVYMNAEQEEKAKKANNPQHSITKDEIKQYVKEYVQAAKNSIAAGADGVEIHSANGYLLNQFL 203          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: KYE1_KLULA (Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.675e-24
Identity = 65/188 (34.57%), Postives = 102/188 (54.26%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQD-YQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            +  P  +G+  L HRVV+  LTR R+ +  NVP P  A+ YY QR+   G ++I E    S  + GY + PG W++EQ+  W+ I  A+H      + Q+W +GR +  D    +G    S++D+    +       I    P   +  DEI Q + D+  AA+  I+AG DG+E+H A+GYL++QF+
Sbjct:   16 IFKPIKIGNTELKHRVVMPALTRMRALHPGNVPNPDWAVEYYRQRSQYPGTMIITEGAFPSAQSGGYDNAPGVWSEEQLAQWRKIFKAIHDNKSFVWVQLWVLGRQAFADNLARDGLRYDSASDEVYMGEDEKERA-IRSNNPQHGITKDEIKQYIRDYVDAAKKCIDAGADGVEIHSANGYLLNQFL 202          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: EBP1_CANAL (Probable NADPH dehydrogenase OS=Candida albicans GN=EBP1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21
Identity = 66/191 (34.55%), Postives = 105/191 (54.97%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQR-SYNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN-QDYQPNGQAPISST----DKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVN-DFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L  P  +G+  L  R+   P TR R S +++P    + YY+ R+   G L+I EAT  S+        PG +   Q ++WK I +A+H  G     Q+W++GRV+N +D + +G   I+ +    D+      +  G ++      R L  +EI  IV  ++  AA++A+EAGFD +E+HGAHGYL+DQF+
Sbjct:   28 LFQPIKVGNNVLPQRIAYVPTTRFRASKDHIPSDLQLNYYNARSQYPGTLIITEATFASERGGIDLHVPGIYNDAQAKSWKKINEAIHGNGSFSSVQLWYLGRVANAKDLKDSGLPLIAPSAVYWDENSEKLAKEAGNEL------RALTEEEIDHIVEVEYPNAAKHALEAGFDYVEIHGAHGYLLDQFL 212          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OYEA_SCHPO (Putative NADPH dehydrogenase C5H10.04 OS=Schizosaccharomyces pombe GN=SPAC5H10.04 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.221e-19
Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRS--YNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPN--GQAPISSTDKPLTPQIRANG------VDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIE-AGFDGIELHGAHGYLIDQFM 689
            L  P  +G++ L HR+V AP+TR R+  Y  +     + YYSQR+   G LLIA+AT V + + G+P+ P  +TKEQ E+W P+V+AVH      F Q W +      +Y+ +      I+ +D P  P     G      V   +    + +   +I + + DF  AA  A+  A  DG+E+H  +G+L+D+F+
Sbjct:    7 LFKPIKVGNMLLQHRIVHAPMTRLRATDYGKITGL-MVEYYSQRSMIPGTLLIADATFVGEKSGGFPNNPRCFTKEQAESWIPLVEAVHKNKSFLFIQFWPLPGDLKDEYRNDLEKMQKITYSDCPQDPGGLPAGIHSFDAVQGVEVYKKKYMSKRDIQEHIQDFVNAADLAVNIAKADGVEIHQVNGFLLDRFV 200          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: NAMA_LISMF (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=namA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.771e-17
Identity = 61/189 (32.28%), Postives = 87/189 (46.03%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G W  EQV A K +VD +H  G     Q+ H GR   +  +   P+  A    +DKP+                   L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFL 174          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: NAMA_LISMC (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=namA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.771e-17
Identity = 61/189 (32.28%), Postives = 87/189 (46.03%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G W  EQV A K +VD +H  G     Q+ H GR   +  +   P+  A    +DKP+                   L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFL 174          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: NAMA_BACA2 (NADPH dehydrogenase OS=Bacillus amyloliquefaciens (strain FZB42) GN=namA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.496e-16
Identity = 54/186 (29.03%), Postives = 92/186 (49.46%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSY--NNVPQP-HAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L TP+ +  + + +R+V+AP+    S+  +   QP H   Y S+   + GL+I EAT V+   +      G W+ + +E +  + + V A+G     Q+ H GR +  +      + I   ++  TP                 + T++I + + +F+ AA  A EAGFD IELH AHGYL+ +F+
Sbjct:    5 LFTPWTVKDVTIKNRIVMAPMCMYSSHEKDGKLQPFHMAHYISRAIGQVGLIIVEATAVNPQGRISDQDLGIWSDDHIEGFAKLTEQVKAQGSKIGIQLAHAGRKAELEGDIYAPSAIPFDEQSKTPA---------------EMTTEQIKETIQEFKQAAARAKEAGFDIIELHAAHGYLMHEFL 175          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: NAMA_LISW6 (NADPH dehydrogenase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=namA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.552e-16
Identity = 59/186 (31.72%), Postives = 86/186 (46.24%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFM 689
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G W  EQV A K +VD +H+ G     Q+ H GR +    +    + I+  +K   P                 L  + I ++V DF+ AA  A EAGFD IE+H AHGYLI QF+
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKHLVDGLHSHGAKAGIQLAHAGRKAVLPGEIVAPSAIAYDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFL 174          
BLAST of FC930196 vs. ExPASy Swiss-Prot
Match: OYEB_SCHPO (Putative NADPH dehydrogenase C5H10.10 OS=Schizosaccharomyces pombe GN=SPAC5H10.10 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.353e-16
Identity = 59/196 (30.10%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  141 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN--VPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGTWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPN---------GQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAI-EAGFDGIELHGAHGYLIDQFM 689
            L  P  +G++ L HR+V AP TR R  +N  V       YY QR++  G LLI E+      + G+ + P  +  E VEAWKPIV A+H      F Q W++      DY  +         G+ P+  T  P      A  +   +    + +   +I + +  +  AA+ A+   G DG+E+H  +G+L+D+F+
Sbjct:   13 LFQPIKVGNMQLQHRMVHAPATRLRCLDNGLVMTDLVKEYYKQRSSIPGTLLITESLFSGAKSGGFSNIPCLYNDEHVEAWKPIVQAIHDNDCFVFIQFWNLPGELKVDYLEDQERLEKVTQGECPMDPTGLPAALG-SAYSICGEELYVDKFMTKQDIQEHITTYTEAAKRAVFGCGADGVEVHQVNGFLLDKFV 207          
The following BLAST results are available for this feature:
BLAST of FC930196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
OYE3_YEAST4.343e-2436.13NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae ... [more]
OYE2_YEAST9.675e-2433.69NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae ... [more]
KYE1_KLULA9.675e-2434.57Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1... [more]
EBP1_CANAL3.441e-2134.55Probable NADPH dehydrogenase OS=Candida albicans G... [more]
OYEA_SCHPO3.221e-1933.33Putative NADPH dehydrogenase C5H10.04 OS=Schizosac... [more]
NAMA_LISMF8.771e-1732.28NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]
NAMA_LISMC8.771e-1732.28NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]
NAMA_BACA21.496e-1629.03NADPH dehydrogenase OS=Bacillus amyloliquefaciens ... [more]
NAMA_LISW62.552e-1631.72NADPH dehydrogenase OS=Listeria welshimeri serovar... [more]
OYEB_SCHPO4.353e-1630.10Putative NADPH dehydrogenase C5H10.10 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionC34004G09EF PostHarvC1 Citrus clementina cDNA clone C34004G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930196 ID=FC930196; Name=FC930196; organism=Citrus clementina; type=EST; length=746bp
GAATCATTTTATTTTCAGACGCGTTAAGGATTCTCAATTTGCTTGTAATT
CTACTAAACATGGGAAACAGAGCAGAGGAGGCTAAGCAAAATCAAGAAGA
GAACAACGGTAACATGGCCATTGAAACTCCCATCATCCCTCTTCTCACTC
CTTACAATATGGGCAGTCTCAATCTTTCTCATAGAGTTGTTTTGGCACCA
CTGACTAGACAGAGATCATACAACAATGTTCCTCAGCCACATGCCATTTT
GTATTACTCTCAAAGAACCACCAAAGGGGGTTTGCTTATAGCCGAAGCCA
CTGGAGTTTCCGACACTGCTCAAGGGTATCCAGATACACCTGGTACCTGG
ACAAAGGAGCAAGTTGAAGCATGGAAACCGATTGTAGATGCTGTTCATGC
CAAAGGTGGGATCTTCTTTTGTCAGATTTGGCACGTTGGCAGGGTTTCAA
ATCAAGATTATCAGCCAAATGGTCAAGCTCCAATTTCCAGTACAGACAAG
CCATTGACCCCTCAAATCCGCGCTAATGGTGTTGATATTGCACAATTCAC
TCCTCCAAGGCGGCTAAGGACAGATGAAATCCCTCAAATTGTGAATGATT
TCAGGCTTGCTGCAAGAAACGCAATTGAGGCTGGTTTCGATGGCATTGAG
CTCCACGGTGCACATGGCTACCTAATTGACCAATTTATGAAGGATCAGTG
AATGATCGAACAGACAGTATGGAGATCCTAGAGAATCGTGCGTTTG
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