FC930201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930201 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17 Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 412 DPEAKLLFIIRIRGINAIDPKTK--KILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKR------GYGKLDKQRIALTDKLIIEKALGKFGIICMEDLIH 738 D + LLFI+R+RG A++ K KIL LLRL + GVF+K+ K +L + PYV G P+L S+R LI KR G + + I L D I+E+ LG GIIC+ED+IH Sbjct: 136 DGKPALLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIH 252
BLAST of FC930201 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.514e-16 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 412 DPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLDKQRIALTDKLIIEKALGKFGIICMEDLIH 738 D E LLF+IR++G A I K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S+R LI KR + + I L D I+E+ LG G+IC+ED+IH Sbjct: 132 DGEPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIH 248
BLAST of FC930201 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 47/115 (40.87%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 418 EAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRG---YGKLDKQ---RIALTDKLIIEKALGKFGIICMEDLIH 738 E +LLF++R++G A I K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS+R LI KR Y + D++ I L D I+E+ LG G+IC++D+IH Sbjct: 133 EEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIH 247
BLAST of FC930201 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15 Identity = 43/122 (35.25%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 373 LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDKLIIEKALGKFGIICMEDLIH 738 L++++ +K GFYV EA+ +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +R+L+Y +G G+ R+ LT++ I + GK I C+E+L+H Sbjct: 63 LEKKSSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVH 182
BLAST of FC930201 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15 Identity = 66/219 (30.14%), Postives = 113/219 (51.60%), Query Frame = 1 Query: 124 PESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQVIXXXXXXXXXXXXIWINKILFFP*F*EKVLIQLKREA---KLKGGFYVDPEAKLLFIIRI----RGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRG-YGKLDKQ----RIALTDK--LIIEKALGKFGIICMEDLIH 738 PE +L+K+K N+ L K+++ +++ +LE +K R+K++ + AE ++ I K + + ++++ K+ D AKLLFIIRI +G+ + K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+R+L KR +D++ RI D ++ +K G IC+EDLIH Sbjct: 8 PEILLRKRKNNDRKRLEKQEQ---ARQRQLEQKKKNDQRSKKFVR--AETLVSNYKSNELENKRI-------------KHITKFEKQSQADKISQAKEDDESAKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIH 207
BLAST of FC930201 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15 Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 412 DPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRG------YGKLDKQRIALTDKLIIEKALGKFGIICMEDLIH 738 D A LLF++R+RG A I K ++L LLRL ++ GVF+++ +L V PYV G P+L S+R L+ KR G+ + L D ++E+ LG G+IC+ED+IH Sbjct: 107 DGRATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIH 223
BLAST of FC930201 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12 Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 427 LLFIIRIRG-INA-IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKL------DKQRIALTDKLIIEKALGKFGIICMEDLIH 738 L I+R G + A I K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++VR+L+ KR + + +++ L D ++E+ LG GIIC+ED+IH Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIH 143 The following BLAST results are available for this feature:
BLAST of FC930201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930201 ID=FC930201; Name=FC930201; organism=Citrus clementina; type=EST; length=738bpback to top |