FC930204

Overview
NameFC930204
Unique NameFC930204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3542 contig Ccv1_Contig3542:44..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_EMENI (Glucose-6-phosphate 1-dehydrogenase OS=Emericella nidulans GN=gsdA PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.757e-31
Identity = 78/174 (44.83%), Postives = 106/174 (60.92%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I+VLGASGDLAKKKTFPALF L+R  FL    + I GYART++  +E   R+R Y+          EQ++ F +L  Y+SG YD ++ F+ L K +   E  KN  E    R+FY ALPPSV+ +VS  +K+ C  ++   G  RI+VEKPFGKDL SS  L   +   ++E +
Sbjct:   25 IVVLGASGDLAKKKTFPALFGLFRNKFLPKG-IKIVGYARTQMDHNEYLKRVRSYI--KTPTKEIEEQLNSFCELCTYISGQYDQDDSFKNLAKHL--EEIEKNQKE--QNRVFYMALPPSVFITVSEQLKRNCYPKN---GVARIIVEKPFGKDLQSSRDLQKALEPNWKEEE 188          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PDC_TOBAC (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.664e-30
Identity = 79/196 (40.31%), Postives = 119/196 (60.71%), Query Frame = 3
Query:  105 RNDSFSRDNDNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYL---INDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            + D+   D++    T  +SI V+GASGDLAKKK FPALF LY +G L  +   IFGYAR+K++D ELRN +   L   I+ +   G  E++ +FL+   Y SG YD+ E F  LDK++  HE+ +      S RLFY ++PP+++ +    ++   ++ S   GWTR++VEKPFG+D +SS  L+  + +   E Q
Sbjct:   95 QKDTIDFDSNKAKST--VSITVVGASGDLAKKKIFPALFALYYEGCLPEH-FTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCG--EKMEQFLERCFYHSGQYDSLENFAELDKKLKEHEAGR-----FSNRLFYLSIPPNIFINA---VRCASLSASSAHGWTRVIVEKPFGRDSESSAALTRSLKQYLNEDQ 277          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_SCHPO (Glucose-6-phosphate 1-dehydrogenase OS=Schizosaccharomyces pombe GN=zwf1 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.646e-30
Identity = 74/188 (39.36%), Postives = 113/188 (60.11%), Query Frame = 3
Query:  120 SRDNDNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            S  N ++ E G +  +V GASGDL+KKKTFPALF+L+ +G L   ++ I GYAR+KI  ++  +RI   +  D+      E++ EF +   Y  GSYD  E F+ L+  +   E  ++    +  R+FY ALPP V+ SV+  +KK C+      G  R+V+EKPFG DL S+++L +Q+  LF+E +
Sbjct:    2 SSANLSIKENGAM--VVFGASGDLSKKKTFPALFSLFSEGRL-PKDIRIVGYARSKIEHEDFLDRITQNIKIDEEDSQAKEKLEEFKKRCSYYRGSYDKPEDFEGLNSHLCEREGDRS----THNRIFYLALPPDVFVSVATNLKKKCVPEK---GIARLVIEKPFGVDLKSAQELQSQLAPLFDEKE 179          

HSP 2 Score: 21.9422 bits (45), Expect = 2.646e-30
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  180 IYRIDHYL 187          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_ASPNG (Glucose-6-phosphate 1-dehydrogenase OS=Aspergillus niger GN=gsdA PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 76/174 (43.68%), Postives = 101/174 (58.05%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            IIVLGASGDLAKKKTFPALF LYR  FL    + I GYART +  +E   R+R Y+          EQ+  F Q   Y+SG YD ++ F  L+K +   E  +        R++Y ALPPSV+ +VS  +K+ C  ++   G  RI+VEKPFGKDL SS  L   +   ++E +
Sbjct:   25 IIVLGASGDLAKKKTFPALFGLYRNKFLPKG-IKIVGYARTNMDHEEYLRRVRSYI--KTPTKEIEEQLDSFCQFCTYISGQYDKDDSFINLNKHLEEIEKGQK----EQNRIYYMALPPSVFTTVSDQLKRNCYPKN---GVARIIVEKPFGKDLQSSRDLQKALEPNWKEEE 188          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_HUMAN (Glucose-6-phosphate 1-dehydrogenase OS=Homo sapiens GN=G6PD PE=1 SV=4)

HSP 1 Score: 130.183 bits (326), Expect = 5.838e-30
Identity = 75/194 (38.66%), Postives = 114/194 (58.76%), Query Frame = 3
Query:  102 LRNDSFSRDNDNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            LR + F  D  +  +T     I++GASGDLAKKK +P ++ L+R G L  N   I GYAR++++  ++R +   +    K+ P +  ++ +F     YV+G YD    +Q L+  ++A       L   + RLFY ALPP+VY +V++ I + CM++    GW RI+VEKPFG+DL SS++LS  I  LF E Q
Sbjct:   16 LREELFQGDAFHQSDTHIF--IIMGASGDLAKKKIYPTIWWLFRDGLLPEN-TFIVGYARSRLTVADIRKQSEPFF---KATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALH-----LGSQANRLFYLALPPTVYEAVTKNIHESCMSQI---GWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQ 195          

HSP 2 Score: 21.9422 bits (45), Expect = 5.838e-30
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  196 IYRIDHYL 203          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_CRIGR (Glucose-6-phosphate 1-dehydrogenase OS=Cricetulus griseus GN=G6PD PE=2 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 5.838e-30
Identity = 70/174 (40.23%), Postives = 110/174 (63.22%), Query Frame = 3
Query:  165 IVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISA-HESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++GASGDLAKKK +P ++ L+R G L   +  I GYAR++++ D++R +   +    K+ P +  ++ EF     YV+G YD    ++ L+  ++A H+  +      + RLFY ALPP+VY +V++ I++ CM+++   GW RI+VEKPFG+DL SS +LS  I  LF E Q
Sbjct:   35 IIMGASGDLAKKKIYPTIWWLFRDGLLPE-DTFIVGYARSRLTVDDIRKQSEPFF---KATPEERPKLEEFFARNSYVAGQYDDPASYKHLNSHMNALHQGMQ------ANRLFYLALPPTVYEAVTKNIQETCMSQT---GWNRIIVEKPFGRDLQSSNQLSNHISSLFREDQ 195          

HSP 2 Score: 21.9422 bits (45), Expect = 5.838e-30
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  196 IYRIDHYL 203          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD1_MOUSE (Glucose-6-phosphate 1-dehydrogenase X OS=Mus musculus GN=G6pdx PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 5.838e-30
Identity = 70/174 (40.23%), Postives = 110/174 (63.22%), Query Frame = 3
Query:  165 IVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISA-HESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++GASGDLAKKK +P ++ L+R G L   +  I GYAR++++ D++R +   +    K+ P +  ++ EF     YV+G YD    ++ L+  ++A H+  +      + RLFY ALPP+VY +V++ I++ CM+++   GW RI+VEKPFG+DL SS +LS  I  LF E Q
Sbjct:   35 IIMGASGDLAKKKIYPTIWWLFRDGLLPE-DTFIVGYARSRLTVDDIRKQSEPFF---KATPEERPKLEEFFARNSYVAGQYDDAASYKHLNSHMNALHQGMQ------ANRLFYLALPPTVYEAVTKNIQETCMSQT---GWNRIIVEKPFGRDLQSSNQLSNHISSLFREDQ 195          

HSP 2 Score: 21.9422 bits (45), Expect = 5.838e-30
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  196 IYRIDHYL 203          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_PICJA (Glucose-6-phosphate 1-dehydrogenase OS=Pichia jadinii PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 7.606e-30
Identity = 74/176 (42.05%), Postives = 107/176 (60.80%), Query Frame = 3
Query:  156 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            ++IIV GASGDLA+KKTFPALF L+R+  L S  V I GYAR+ +SD + ++ I  +        G  +   +FL L  Y+S  YDT+EG++ L+     +ES  N       RLFY ALPPSV+ +V   +KK    +++    +RI++EKPFG+DL++  +L  QI  LF E +
Sbjct:    9 VTIIVFGASGDLARKKTFPALFGLFREKQLPST-VQIIGYARSHLSDKDFKDYISSHF-----KGGDDKTKEDFLNLCSYISDPYDTDEGYKKLEARCQEYESKHN--VKVPERLFYLALPPSVFHTVCEQVKKNVYPKNEK---SRIIIEKPFGRDLETYRELQKQISPLFTEDE 173          

HSP 2 Score: 21.557 bits (44), Expect = 7.606e-30
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            +YRIDHYL
Sbjct:  174 VYRIDHYL 181          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_RAT (Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus GN=G6pdx PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 1.289e-29
Identity = 70/174 (40.23%), Postives = 109/174 (62.64%), Query Frame = 3
Query:  165 IVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISA-HESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++GASGDLAKKK +P ++ L+R G L   +  I GYAR++++ D++R +   +    K  P +  ++ EF     YV+G YD    ++ L+  ++A H+  +      + RLFY ALPP+VY +V++ I++ CM+++   GW RI+VEKPFG+DL SS +LS  I  LF E Q
Sbjct:   35 IIMGASGDLAKKKIYPTIWWLFRDGLLPE-DTFIVGYARSRLTVDDIRKQSEPFF---KVTPEERPKLEEFFARNSYVAGQYDDPASYKHLNSHMNALHQGMQ------ANRLFYLALPPTVYEAVTKNIQEICMSQT---GWNRIIVEKPFGRDLQSSNQLSNHISSLFREDQ 195          

HSP 2 Score: 21.9422 bits (45), Expect = 1.289e-29
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  196 IYRIDHYL 203          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_CAEEL (Glucose-6-phosphate 1-dehydrogenase OS=Caenorhabditis elegans GN=gspd-1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.844e-29
Identity = 72/173 (41.62%), Postives = 100/173 (57.80%), Query Frame = 3
Query:  165 IVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            ++ GASGDLAKKK +P L+ L+R   L  N +   GYAR+ ++  +LR        N K    +     +F++   YV G YDT EGFQ L   I   +   N+   +  RL+Y ALPPSV+  VS  +KK CM+  D   WTR+++EKPFG DL SS +LS  + +LF+E Q
Sbjct:   37 VIFGASGDLAKKKIYPTLWWLFRDNLLPVN-IKFIGYARSDLTVFKLRESFEK---NCKVRENEKCAFDDFIKKCSYVQGQYDTSEGFQRLQSSIDDFQKESNNQ--AVNRLYYLALPPSVFNVVSTELKKNCMDHGD--SWTRVIIEKPFGHDLKSSCELSTHLAKLFKEDQ 201          

HSP 2 Score: 21.9422 bits (45), Expect = 2.844e-29
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  202 IYRIDHYL 209          
The following BLAST results are available for this feature:
BLAST of FC930204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
G6PD_EMENI9.757e-3144.83Glucose-6-phosphate 1-dehydrogenase OS=Emericella ... [more]
G6PDC_TOBAC1.664e-3040.31Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD_SCHPO2.646e-3039.36Glucose-6-phosphate 1-dehydrogenase OS=Schizosacch... [more]
G6PD_ASPNG2.839e-3043.68Glucose-6-phosphate 1-dehydrogenase OS=Aspergillus... [more]
G6PD_HUMAN5.838e-3038.66Glucose-6-phosphate 1-dehydrogenase OS=Homo sapien... [more]
G6PD_CRIGR5.838e-3040.23Glucose-6-phosphate 1-dehydrogenase OS=Cricetulus ... [more]
G6PD1_MOUSE5.838e-3040.23Glucose-6-phosphate 1-dehydrogenase X OS=Mus muscu... [more]
G6PD_PICJA7.606e-3042.05Glucose-6-phosphate 1-dehydrogenase OS=Pichia jadi... [more]
G6PD_RAT1.289e-2940.23Glucose-6-phosphate 1-dehydrogenase OS=Rattus norv... [more]
G6PD_CAEEL2.844e-2941.62Glucose-6-phosphate 1-dehydrogenase OS=Caenorhabdi... [more]

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Properties
Property NameValue
Genbank descriptionC34004H05EF PostHarvC1 Citrus clementina cDNA clone C34004H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930204 ID=FC930204; Name=FC930204; organism=Citrus clementina; type=EST; length=707bp
GATCCTTGTTTTCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAAC
AGAGAGTAGGAGATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAG
TTTGAGGAATGATTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTG
GATGTCTTTCAATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAA
AAGACTTTTCCTGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTC
AAATGAAGTTCACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATG
AGCTGAGAAATCGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCG
GGACAATCAGAGCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAG
TGGTTCTTATGACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTT
CTGCACATGAATCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTC
TTTTATTTTGCACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGAT
TAAGAAGTGCTGCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTG
TTGTTGAGAAGCCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGT
GCCCAGATTGGGGAGTTGTTTGAAGAACCACAATCTACCGTATTGATCAC
TATTTGG
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