FC930204

Overview
NameFC930204
Unique NameFC930204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PDC_SPIOL (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 76/187 (40.64%), Postives = 111/187 (59.36%), Query Frame = 3
Query:  132 DNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYL---INDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            ++V E   LSIIV+GASGDLAKKK FPALF L+ +  L  N   +FG++RT+++D+ELR  I   L   I+ +   G  E++  FLQ   Y SG Y++E+ F  LD ++   E+ +        RLFY ++PP+++  V R +       S   GWTR++VEKPFG+D DSS +L+    +   E Q
Sbjct:   79 ESVKEEPTLSIIVVGASGDLAKKKIFPALFALFYENCLPEN-FTVFGFSRTEMNDEELRTMISKTLTCRIDQRENCG--EKMDHFLQRCFYHSGQYNSEDDFSGLDCKLKEKEAGR-----LQNRLFYLSIPPNIFVDVVRCVSH---RASSASGWTRVIVEKPFGRDSDSSRELTRSFKQYLSEDQ 254          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_TAKRU (Glucose-6-phosphate 1-dehydrogenase OS=Takifugu rubripes GN=g6pd PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.063e-28
Identity = 75/175 (42.86%), Postives = 104/175 (59.43%), Query Frame = 3
Query:  165 IVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSS--RRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++GASGDLAKKK +P L+ L+R G L   + +  G+AR+ ++ D +R     YL   K    +S+++S F     Y+SG+Y     F     E++AH  S   L G+S   RLFY ALPP++Y SV+  IK  CM+     GW R++VEKPFG DL SSE+LS  +  LF E Q
Sbjct:   50 IIMGASGDLAKKKIYPTLWWLFRDGLLPE-QTYFVGFARSALTVDAIRTSCMPYL---KVTETESDRLSAFFSRNSYISGNYTAGGSFS----ELNAHIMS---LPGASDANRLFYLALPPTIYHSVTENIKHFCMSAK---GWNRVIVEKPFGHDLQSSEELSTHLSSLFTEDQ 210          

HSP 2 Score: 21.9422 bits (45), Expect = 1.063e-28
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  211 IYRIDHYL 218          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_DROME (Glucose-6-phosphate 1-dehydrogenase OS=Drosophila melanogaster GN=Zw PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.385e-28
Identity = 69/175 (39.43%), Postives = 106/175 (60.57%), Query Frame = 3
Query:  159 SIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            + ++ GASGDLAKKK +P L+ LYR   L        GYAR+ ++ D ++ +   Y+   K  P + ++  EF  L +YVSG YD   GF+LL++++   E+     +  + R+FY ALPPSV+  V+  IK+ CM+   + GW R+++EKPFG+D  SS+ LS  +  LF+E Q
Sbjct:   37 TFVIFGASGDLAKKKIYPTLWWLYRDDLLPK-PTKFCGYARSMLTVDSIKEQCLPYM---KVQPHEQKKYEEFWALNEYVSGRYDGRTGFELLNQQLEIMEN-----KNKANRIFYLALPPSVFEEVTVNIKQICMS---VCGWNRVIIEKPFGRDDASSQALSDHLAGLFQEDQ 199          

HSP 2 Score: 21.1718 bits (43), Expect = 1.385e-28
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            +YRIDHYL
Sbjct:  200 LYRIDHYL 207          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 73/179 (40.78%), Postives = 112/179 (62.57%), Query Frame = 3
Query:  156 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYL---INDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            LSI V+GASGDLAKKK FPALF L+ +G L   +  +FGYARTK++ +ELR+ I   L   I+ +   G  +++ +FL+   Y SG Y++EE F  L+K++   E+ K      S RL+Y ++PP+++  V   ++   +  S   GWTR++VEKPFG+D +SS +L+  + +   E Q
Sbjct:   91 LSITVVGASGDLAKKKIFPALFALFYEGCL-PQDFSVFGYARTKLTHEELRDMISSTLTCRIDQREKCG--DKMEQFLKRCFYHSGQYNSEEDFAELNKKLKEKEAGK-----ISNRLYYLSIPPNIFVDV---VRCASLRASSENGWTRVIVEKPFGRDSESSGELTRCLKQYLTEEQ 258          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28
Identity = 73/177 (41.24%), Postives = 104/177 (58.76%), Query Frame = 3
Query:  156 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLI-NDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            +SI V+GASGDLAKKK  PALF L+ +  L  N V +FGY+RTK+SD+ELRN I   L            ++  FL+   Y SG Y++E+ F  LD ++   E  +      S RLFY ++PP+++  V R      +  S   GWTR++VEKPFG+DL+SS +L+  + +   E Q
Sbjct:   91 VSITVIGASGDLAKKKILPALFALFYEDCLPENFV-VFGYSRTKLSDEELRNMISTTLTCRIDKRENCDAKMEHFLERCFYHSGQYNSEDDFAELDYKLKEKEGCR-----VSNRLFYLSIPPNIFVDVVRCAS---LKASSTSGWTRVIVEKPFGRDLESSSELTRSLKKYLTEEQ 258          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD2_MOUSE (Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus musculus GN=G6pd2 PE=2 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 3.056e-28
Identity = 72/194 (37.11%), Postives = 117/194 (60.31%), Query Frame = 3
Query:  105 RNDSFSRDNDNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISA-HESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            +ND+F + + ++        I++GASGDLAKKK +P ++ L+R G L   E  I GYAR++++ D+++ +   +    K+ P +  ++ EF     YV G YD    ++ L+  I+A H+  +      +  LFY ALPP+VY +V++ I++ CM+++   G+ RI+VEKPFG+DL SS +LS  I  LF E Q
Sbjct:   22 QNDAFHQADTHI-------FIIMGASGDLAKKKIYPTIWWLFRDGLLPK-ETFIVGYARSQLTVDDIQKQSEPFF---KATPEERPKLEEFFTRNSYVVGQYDDPASYKHLNSYINALHQGMQ------ANHLFYLALPPTVYEAVTKNIQETCMSQT---GFNRIIVEKPFGRDLQSSNQLSNHISSLFREDQ 195          

HSP 2 Score: 21.9422 bits (45), Expect = 3.056e-28
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  196 IYRIDHYL 203          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_CERCA (Glucose-6-phosphate 1-dehydrogenase OS=Ceratitis capitata GN=ZW PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.776e-28
Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 3
Query:  129 NDNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            + +VP T     ++ GASGDLAKKK +P L+ LYR   L  +     GYAR+K++ +ELR +   Y+   K  P +  +  EF Q   Y +GSYD    F  L + +S+ ES   S      R+FY ALPPSV+  V+  IK  C+      GW R+++EKPFG+D  +S+KLS  +  LF E Q
Sbjct:   39 DSHVPHT----FVIFGASGDLAKKKIYPTLWWLYRDNLLPKS-TKFCGYARSKLTIEELRAKCHQYM---KVQPDEQAKYEEFWQNHDYAAGSYDQRSDFVALKERLSSLESCNCSCN----RIFYLALPPSVFERVTVNIKDICLAER---GWNRVIIEKPFGRDDVTSKKLSDHLASLFHEDQ 208          

HSP 2 Score: 21.1718 bits (43), Expect = 8.776e-28
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            +YRIDHYL
Sbjct:  209 LYRIDHYL 216          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_DROYA (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Drosophila yakuba GN=Zw PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.420e-27
Identity = 67/175 (38.29%), Postives = 103/175 (58.86%), Query Frame = 3
Query:  159 SIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            + ++ GASGDLAKKK +P L+  YR   L        GYAR+ ++ D ++ +   Y+   K    + ++  EF  L +YVSG YD   GF+LL++++   E+     +  + R+FY ALPPSV+  V+  IK+ CM+   + GW R+++EKPFG+D  SS+ LS  +  LF E Q
Sbjct:   31 TFVIFGASGDLAKKKIYPKLWWFYRDDLLPKL-TKFCGYARSMLTVDSIKEQCLPYM---KVQSHEQKKYEEFWALNEYVSGRYDGRTGFELLNQQLELMEN-----KNKANRIFYLALPPSVFEEVTVNIKQICMS---VCGWNRVIIEKPFGRDDASSQALSDHLAALFHEDQ 193          

HSP 2 Score: 21.1718 bits (43), Expect = 9.420e-27
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            +YRIDHYL
Sbjct:  194 LYRIDHYL 201          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD3_SCHPO (Probable glucose-6-phosphate 1-dehydrogenase C7.13c OS=Schizosaccharomyces pombe GN=SPAC3C7.13c PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.970e-24
Identity = 66/177 (37.29%), Postives = 103/177 (58.19%), Query Frame = 3
Query:  156 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQV-SEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            ++ +V GASG+LA KKTFPALF+L+++  +  +  ++ GYAR+KI   E R  IR  +  D     +S+QV  +F+  + Y SG YD    +    K + + E   +S    + R+FY ALPPSVY +VS  I         L G +R+V+EKPFGK+  S+ KL  ++ + ++E +
Sbjct:    2 VTFMVFGASGNLANKKTFPALFHLFKRNLVDRSSFYVLGYARSKIPIGEFRESIRESVKPDT----ESKQVFQDFIDRVSYFSGQYDQSSSYVEFRKHLESVEKKADS--SKALRIFYIALPPSVYVTVSSHI----YENLYLPGKSRLVIEKPFGKNYQSAVKLKEEVHKHWKEEE 168          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_CULPI (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Culex pipiens GN=ZW PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.186e-24
Identity = 67/156 (42.95%), Postives = 91/156 (58.33%), Query Frame = 3
Query:  216 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            L+ L+R   L S    + GYARTK++  EL+ +   Y+  D +     E+  EF  L  YV+GSYD    F+LL++EI   E  K     ++ RLFY  LPPSV+ +V+  I+  CM    L GW RI+VEKPFG+D DSS KLS  + +LF E Q
Sbjct:    1 LWWLFRDNLLPSVTKFV-GYARTKLTVAELKEKCHPYMKVDAA---HEEKYDEFWALNFYVAGSYDGRRDFELLNQEIGKFEVGK-----TANRLFYLRLPPSVFETVTVHIRNTCMG---LKGWNRIIVEKPFGRDADSSNKLSEHLAKLFTEDQ 144          

HSP 2 Score: 21.1718 bits (43), Expect = 9.186e-24
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            +YRIDHYL
Sbjct:  145 LYRIDHYL 152          
The following BLAST results are available for this feature:
BLAST of FC930204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
G6PDC_SPIOL4.099e-2940.64Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD_TAKRU1.063e-2842.86Glucose-6-phosphate 1-dehydrogenase OS=Takifugu ru... [more]
G6PD_DROME1.385e-2839.43Glucose-6-phosphate 1-dehydrogenase OS=Drosophila ... [more]
G6PD1_ARATH2.034e-2840.78Glucose-6-phosphate 1-dehydrogenase 1, chloroplast... [more]
G6PDC_SOLTU2.657e-2841.24Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD2_MOUSE3.056e-2837.11Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus muscu... [more]
G6PD_CERCA8.776e-2840.00Glucose-6-phosphate 1-dehydrogenase OS=Ceratitis c... [more]
G6PD_DROYA9.420e-2738.29Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD3_SCHPO3.970e-2437.29Probable glucose-6-phosphate 1-dehydrogenase C7.13... [more]
G6PD_CULPI9.186e-2442.95Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionC34004H05EF PostHarvC1 Citrus clementina cDNA clone C34004H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930204 ID=FC930204; Name=FC930204; organism=Citrus clementina; type=EST; length=707bp
GATCCTTGTTTTCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAAC
AGAGAGTAGGAGATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAG
TTTGAGGAATGATTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTG
GATGTCTTTCAATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAA
AAGACTTTTCCTGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTC
AAATGAAGTTCACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATG
AGCTGAGAAATCGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCG
GGACAATCAGAGCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAG
TGGTTCTTATGACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTT
CTGCACATGAATCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTC
TTTTATTTTGCACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGAT
TAAGAAGTGCTGCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTG
TTGTTGAGAAGCCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGT
GCCCAGATTGGGGAGTTGTTTGAAGAACCACAATCTACCGTATTGATCAC
TATTTGG
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