FC930204

Overview
NameFC930204
Unique NameFC930204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD2_SCHPO (Probable glucose-6-phosphate 1-dehydrogenase C794.01c OS=Schizosaccharomyces pombe GN=SPCC794.01c PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 62/170 (36.47%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  156 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGE 665
            LSIIV GASGDLA K TFPALF LY +  +   +  I GYAR+K+S +     +  ++  D +     + ++ F++  KYV G+YD  E F++L+  I+  E++  S      R+FY  LPP ++  VS +IK         G  TR++VEKP G D  S++ + + + +
Sbjct:    2 LSIIVFGASGDLATKMTFPALFALYVRKIIPE-DFQIIGYARSKLSQEAANKIVTAHIPIDDTVGASQKALNTFVEHYKYVPGTYDKPESFEMLNSIIAEKETAPAS---ECTRIFYLVLPPHLFAPVSELIKS---KAHPNGMVTRLIVEKPIGFDYKSADAILSDLSK 164          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_SARBU (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Sarcophaga bullata GN=ZW PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.665e-22
Identity = 58/156 (37.18%), Postives = 94/156 (60.26%), Query Frame = 3
Query:  216 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            L+ LYR   L        GYAR+K++  ++R     ++   K  P + ++  EF +L  YVSGSYD   GF++L +++   E+     +G + R+FY ALPPSV+ SV+  IK+ C+++    GW R+++EKPFG+D  +S++LS  +  LF+E Q
Sbjct:    1 LWWLYRDNLLPK-PTKFCGYARSKLTTADIRKACEKFM---KVQPHEQQRYEEFWELNHYVSGSYDGRLGFEMLQQQMEIMEN-----KGVANRVFYLALPPSVFNSVTVRIKEICLSKK---GWNRVIIEKPFGRDDVTSKQLSDHLASLFDEEQ 144          

HSP 2 Score: 21.9422 bits (45), Expect = 1.665e-22
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  145 IYRIDHYL 152          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_BOSIN (Glucose-6-phosphate 1-dehydrogenase OS=Bos indicus GN=G6PD PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 8.333e-21
Identity = 60/174 (34.48%), Postives = 96/174 (55.17%), Query Frame = 3
Query:  165 IVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISA-HESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++GASGDLAK+  +P ++ L++ G L   +  I GY  +  +   +R +   +    KS P +  ++ EF     Y++  YD    ++ L+  ++A H+  + +       LFY AL PS Y +V++ I   C +++   GW RI+VEKPFG+DL SS +LS  I  LF E Q
Sbjct:   35 IIMGASGDLAKRNIYPTIWWLFQDGLLPK-DTFIVGYTDSHFTVANIRKQSEPFF---KSTPEEEPKLEEFFAHSSYMASQYDDVASYEHLNSGMNALHQGPQANC------LFYLALLPSGYRTVTKNICDTCTSQT---GWNRIIVEKPFGRDLQSSNQLSNHIASLFHEDQ 195          

HSP 2 Score: 21.9422 bits (45), Expect = 8.333e-21
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  196 IYRIDHYL 203          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_AGGAC (Glucose-6-phosphate 1-dehydrogenase OS=Aggregatibacter actinomycetemcomitans GN=zwf PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.835e-20
Identity = 60/175 (34.29%), Postives = 101/175 (57.71%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVS-GSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++ GASGDL  +K  PAL+NLY+   L   +  + G ART+++D   R ++R  LI ++ A G  E + +F   + Y +  + D  +  +L+ +    H++ +   EG++  L+Y + PPS+Y  +   + +  +N+ D G W R++VEKPFG D +++E L  QI   FEE Q
Sbjct:    8 IVIFGASGDLTYRKLIPALYNLYKIDRL-GEDFSVLGVARTELNDKSFREKMRQTLIKNEGAKG--ECLEQFCSHLYYQAVNTADKADYAKLVPRLDELHDTYRT--EGNT--LYYLSTPPSLYGVIPECLGEHGLNKEDRG-WKRLIVEKPFGYDRETAEALDIQIHRFFEEHQ 174          

HSP 2 Score: 21.9422 bits (45), Expect = 1.835e-20
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  175 IYRIDHYL 182          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_DROSI (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Drosophila simulans GN=Zw PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.557e-19
Identity = 57/156 (36.54%), Postives = 86/156 (55.13%), Query Frame = 3
Query:  216 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            L+ LYR   L        GYAR+ ++ + L+ +   Y+   K  P +  +  EF  L  YVSG YD    F++L++ +   E+     +  + R+FY ALPPSV+  V+  IK+ CM+   L GW R+++EKPFG+D  SS+ LS  +  LF E Q
Sbjct:    1 LWWLYRDDLLPK-PTKFCGYARSMLTTETLKEQCLPYM---KVQPHEQNKYEEFWALNDYVSGRYDGRTSFEVLNQRLEMMEN-----KNKANRIFYLALPPSVFEEVTVNIKQVCMS---LCGWNRVIIEKPFGRDDASSQALSDHLAGLFNEDQ 144          

HSP 2 Score: 21.1718 bits (43), Expect = 1.557e-19
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            +YRIDHYL
Sbjct:  145 LYRIDHYL 152          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19
Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 3
Query:  150 GCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQ------SEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            G +SII+LGA+GDLAKK  +  LF LY     ++   H F +    ++  +    +    +   S P        +E   +FLQL +Y      T E +Q L+K+I A        E    R+FYF++PP  Y  ++R I   C  R   G W R+V+EKPFG D  S+++L+ ++G  F+E +
Sbjct:   24 GHVSIILLGATGDLAKKYLWQGLFQLYLD---EAGRGHSFSFHGAALTAPKQGQELMAKALESLSCPKDMAPSHCAEHKDQFLQLSQY--RQLKTAEDYQALNKDIEAQLQHAGLREAG--RIFYFSVPPFAYEDIARNINSSC--RPGPGAWLRVVLEKPFGHDHFSAQQLATELGTFFQEEE 198          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19
Identity = 65/192 (33.85%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  120 SRDNDNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLI----NDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            S D  +V     L I V+GA+G+LA+ K FPALF LY  G+L   +V IFG +R  ++D++LR+ I   L     + ++  G   ++  F     Y++G Y+  +G   L + +   E      E  + R+FY ++P      V+  I     N     GWTRI+VEKPFG +  SS +L+  +   FEE Q
Sbjct:  142 SDDLSDVRRRASLCIAVVGATGELARGKIFPALFALYYSGYL-PEDVAIFGVSRKNLTDEDLRSIIASTLTCRVDHQENCGG---KMDAFQSRTYYINGGYNNRDGMSRLAERMKQIEG-----ESEANRIFYLSVPQEALVDVACTIGD---NAQAPRGWTRIIVEKPFGFNSHSSHQLTKSLLSKFEEKQ 321          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19
Identity = 60/184 (32.61%), Postives = 94/184 (51.09%), Query Frame = 3
Query:  150 GCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQ------SEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            G +SII+LGA+GDLAKK  +  LF LY     ++ + H F +    ++  +   ++    +   S P         E   +FLQL +Y      T E +Q L+K+I          E    R+FYF++PP  Y  ++R I   C  R   G W R+V EKPFG D  S+++L++++G  F+E +
Sbjct:   21 GHVSIILLGATGDLAKKYLWQGLFQLYLD---EAGKGHSFSFHGAALTAPQQGQKLMDKALESLSCPKDLVPSRCDELKGQFLQLSQY--HQLKTVEDYQTLNKDIETQVQQDGLWEAG--RIFYFSVPPFAYADIARNINSSC--RPHPGAWLRVVFEKPFGHDHLSAQQLASELGSFFQEEE 195          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_HYACE (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Hyalophora cecropia GN=ZW PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.658e-18
Identity = 53/156 (33.97%), Postives = 89/156 (57.05%), Query Frame = 3
Query:  216 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            ++ L+R   L  N   I GYARTK +  E++ + + Y+   K   G+ +++ EF     Y+SGSYD    ++ L++ IS +E         + R+FY A+PP+V+   +  I+  C   + + G+TR+++EKPFG+D  SS+ LS  +  LF+E Q
Sbjct:    1 IWYLFRDNLLPRNTKFI-GYARTKQTLAEVKEKCKKYI---KVRTGEEDKLEEFWAANDYLSGSYDKRVDYEFLNQVISKYEKGP-----IANRIFYLAVPPTVFEDATLNIRNAC---TSIKGFTRVIIEKPFGRDDKSSDILSKDLAGLFKEEQ 144          

HSP 2 Score: 21.9422 bits (45), Expect = 1.658e-18
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  145 IYRIDHYL 152          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PE_RABIT (GDH/6PGL endoplasmic bifunctional protein OS=Oryctolagus cuniculus GN=H6PD PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 57/184 (30.98%), Postives = 96/184 (52.17%), Query Frame = 3
Query:  150 GCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQ------SEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            G +S+I+LGA+GDLAKK  +  LF L+     ++ + H F +    ++  +    +    +   S P        +E  ++FL+L +Y      T E +Q L ++I A    +   E    R+FYF++PP  Y  ++R I   C  R   G W R+V+EKPFG D  S+++L+ ++G  F+E +
Sbjct:    5 GHVSVILLGATGDLAKKYLWQGLFQLFLD---EAGKGHSFSFHGAALTAPKQGQELMAKALESLSCPRDMAPSLCAELQAQFLRLSRY--RQLKTAEDYQALGRDIEAQVQQEGLREAG--RMFYFSVPPFAYADIARNINSSC--RPGPGAWLRVVLEKPFGHDHLSAQQLATELGSFFQEEE 179          
The following BLAST results are available for this feature:
BLAST of FC930204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
G6PD2_SCHPO1.277e-2236.47Probable glucose-6-phosphate 1-dehydrogenase C794.... [more]
G6PD_SARBU1.665e-2237.18Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD_BOSIN8.333e-2134.48Glucose-6-phosphate 1-dehydrogenase OS=Bos indicus... [more]
G6PD_AGGAC1.835e-2034.29Glucose-6-phosphate 1-dehydrogenase OS=Aggregatiba... [more]
G6PD_DROSI1.557e-1936.54Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PE_HUMAN1.726e-1933.15GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
G6PD4_ARATH2.945e-1933.85Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PE_MOUSE5.023e-1932.61GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PD_HYACE1.658e-1833.97Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PE_RABIT1.909e-1830.98GDH/6PGL endoplasmic bifunctional protein OS=Oryct... [more]

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Properties
Property NameValue
Genbank descriptionC34004H05EF PostHarvC1 Citrus clementina cDNA clone C34004H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930204 ID=FC930204; Name=FC930204; organism=Citrus clementina; type=EST; length=707bp
GATCCTTGTTTTCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAAC
AGAGAGTAGGAGATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAG
TTTGAGGAATGATTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTG
GATGTCTTTCAATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAA
AAGACTTTTCCTGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTC
AAATGAAGTTCACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATG
AGCTGAGAAATCGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCG
GGACAATCAGAGCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAG
TGGTTCTTATGACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTT
CTGCACATGAATCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTC
TTTTATTTTGCACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGAT
TAAGAAGTGCTGCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTG
TTGTTGAGAAGCCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGT
GCCCAGATTGGGGAGTTGTTTGAAGAACCACAATCTACCGTATTGATCAC
TATTTGG
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