FC930204

Overview
NameFC930204
Unique NameFC930204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_HAEIN (Glucose-6-phosphate 1-dehydrogenase OS=Haemophilus influenzae GN=zwf PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.078e-18
Identity = 57/176 (32.39%), Postives = 94/176 (53.41%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLI-NDKSAPGQSEQVSEFLQLIKYVS-GSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++ GASGDL  +K  PAL+NLY+ G L  N   + G AR+ ++D+  R ++R  LI N+++ P   E +  F   + Y +  + D ++  +L+ +    H+  +          +Y + PPS+Y  +   +    +N  + G W RI+VEKPFG D  +++ L  QI   FEE Q
Sbjct:    8 IVIFGASGDLTHRKLIPALYNLYKIGRLSEN-FSVLGVARSDLNDETFREKMREALIHNEETTP---ETLDAFCSHLYYQAVNTSDAQDYGKLVPRLDDLHDKYQTC----GNTFYYMSTPPSLYGVIPECLAAHGLNTEEYG-WKRIIVEKPFGYDEKTAQTLDVQIHRFFEEHQ 174          

HSP 2 Score: 21.9422 bits (45), Expect = 2.078e-18
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  175 IYRIDHYL 182          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_THEMA (Glucose-6-phosphate 1-dehydrogenase OS=Thermotoga maritima GN=zwf PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 58/174 (33.33%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++ GASGDL K+K  PAL  L+  G L      + G ARTK+ D + R+R               +   +FL+   Y+S  Y   E F+ L   I   E+    ++ SS  +FY A+PP +Y  +   + K  +N        R+V+EKPFGKDL+S+ +L   + + F+E Q
Sbjct:   27 IVIFGASGDLTKRKLIPALNRLFEAGILPER-FFVLGAARTKMDDKKFRSRF--------------DANPDFLEHCSYISVDYQDPESFKQLKNTI---ETLIKRID-SSNLVFYLAVPPDLYIPILENLSKTGLNEKP----ARVVIEKPFGKDLESARRLEDTLQKYFQEDQ 177          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_MYCTU (Glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium tuberculosis GN=zwf PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17
Identity = 50/195 (25.64%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   96 SSLRNDSFSRDNDNVPE-TGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEE 677
            +S RN    + +  +P   G   +++ G +GDLA+KK  PA+++L  +G L      + G+AR   S  +    +   +      P + +      +  ++V G++D ++ F  L + +   ++ + +        FY A+PP  +P V   + K  + R     W+R+V+EKPFG DL S+ +L+  +  +F E
Sbjct:    8 ASWRNPLRDKRDKRLPRIAGPCGMVIFGVTGDLARKKVMPAVYDLANRGLLPPT-FSLVGFARRDWSTQDFGQVVYNAVQEHCRTPFRQQNWDRLAEGFRFVPGTFDDDDAFAQLAETLEKLDAERGT---GGNHAFYLAIPPKSFPVVCEQLHKSGLARPQGDRWSRVVIEKPFGHDLASARELNKAVNAVFPE 198          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_MYCBO (Glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium bovis GN=zwf PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17
Identity = 50/195 (25.64%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   96 SSLRNDSFSRDNDNVPE-TGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEE 677
            +S RN    + +  +P   G   +++ G +GDLA+KK  PA+++L  +G L      + G+AR   S  +    +   +      P + +      +  ++V G++D ++ F  L + +   ++ + +        FY A+PP  +P V   + K  + R     W+R+V+EKPFG DL S+ +L+  +  +F E
Sbjct:    8 ASWRNPLRDKRDKRLPRIAGPCGMVIFGVTGDLARKKVMPAVYDLANRGLLPPT-FSLVGFARRDWSTQDFGQVVYNAVQEHCRTPFRQQNWDRLAEGFRFVPGTFDDDDAFAQLAETLEKLDAERGT---GGNHAFYLAIPPKSFPVVCEQLHKSGLARPQGDRWSRVVIEKPFGHDLASARELNKAVNAVFPE 198          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_TREPA (Glucose-6-phosphate 1-dehydrogenase OS=Treponema pallidum GN=zwf PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.035e-16
Identity = 55/176 (31.25%), Postives = 91/176 (51.70%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDK-SAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQS 686
            +++ GASGDLA +K  P+L++L+ Q  L      I G  RT +S +  R R+   +       P    +++EFLQ I Y S  +D  +     D         + SL      +FY A PPS+Y ++   +    +NR   G + R+V+EKPFG +L++++ L+A +   F+E Q+
Sbjct:   15 LVIFGASGDLAARKLIPSLWDLFEQELLPRT-FGILGAGRTALSTESFRARLAEAVTKHAVRTPHDPARLTEFLQKIHYFS--FDPTDSVAFADFATYVRTLDQ-SLHTEGNFIFYLATPPSLYETIPTQLAMHHLNREQ-GNFRRVVIEKPFGYNLETAQHLNASLRAHFQENQT 185          

HSP 2 Score: 20.4014 bits (41), Expect = 3.035e-16
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 2
Query:  686 YRIDHYL 706
            YRIDHYL
Sbjct:  186 YRIDHYL 192          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_SYNY3 (Glucose-6-phosphate 1-dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=zwf PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.129e-16
Identity = 52/176 (29.55%), Postives = 92/176 (52.27%), Query Frame = 3
Query:  156 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            L + + GASGDL ++K  PA++ + R+  L   E+ + G+AR   S D  R ++R  +    +  G  +  +EF Q + Y SG+ D  E +  L   +   +  +N+      R+FY A+ P+ +P   + +    M    +   +RIV+EKPFG+DL S++ L+  +  + +E Q
Sbjct:   22 LILTIFGASGDLTQRKLVPAIYQMKRERRLPP-ELTVVGFARRDWSHDHFREQMRKGIEEFSTGIGSEDLWNEFAQGLFYCSGNMDDPESYLKLKNFLGELDEKRNT---RGNRVFYLAVSPNFFPPGIKQLGAAGMLSDPVK--SRIVIEKPFGRDLSSAQSLNRVVQSVCKENQ 191          

HSP 2 Score: 21.557 bits (44), Expect = 5.129e-16
Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            +YRIDHYL
Sbjct:  192 VYRIDHYL 199          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_BACSU (Glucose-6-phosphate 1-dehydrogenase OS=Bacillus subtilis GN=zwf PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 8.672e-16
Identity = 48/174 (27.59%), Postives = 93/174 (53.45%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            I++ GA+GDLAK+K +P++  LY+ G +   E  + G  R   S+++LR  ++  +     +    + + +F     Y          +Q L+  ++  E   ++ +  + R+FY A+ P  + ++++ +K   +  +   GW+R+V+EKPFG DL S++ L+ +I E F E Q
Sbjct:   11 IVIFGATGDLAKRKLYPSIHRLYQNGQI-GEEFAVVGVGRRPWSNEDLRQTVKTSI-----SSSADKHIDDFTSHFYYHPFDVTNPGSYQELNVLLNQLE---DTYQIPNNRMFYLAMAPEFFGTIAKTLKSEGVTATT--GWSRLVIEKPFGHDLPSAQALNKEIREAFTEDQ 173          

HSP 2 Score: 21.9422 bits (45), Expect = 8.672e-16
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 2
Query:  683 IYRIDHYL 706
            IYRIDHYL
Sbjct:  174 IYRIDHYL 181          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_CHLMU (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia muridarum GN=zwf PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.902e-15
Identity = 52/166 (31.33%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQ-LIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGG---WTRIVVEKPFGKDLDSSEKL 647
            +++ GA+GDL  +K FPAL+NL ++G L  N V + G+AR   S ++ R  +R  + N   +     +V E L+  I Y   ++   EG+  L    S  ES          RLFY + PP  +  + R + +  +   + G    W+R+++EKPFG DL ++++L
Sbjct:   19 MVIFGATGDLTARKLFPALYNLTKEGRLSENFVCV-GFARRPKSHEQFREEMRQAIQNFSHSSEIDIRVWESLEHRIFYHQANFSEAEGYSSLR---SFLESVDQKYGTKGNRLFYLSTPPDYFQEIIRNLNRHQLFYHEQGAQQPWSRLIIEKPFGVDLQTAQEL 180          

HSP 2 Score: 21.9422 bits (45), Expect = 1.902e-15
Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2
Query:  680 TIYRIDHYL 706
            ++YRIDHYL
Sbjct:  192 SVYRIDHYL 200          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_LEUME (Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc mesenteroides GN=zwf PE=1 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 48/174 (27.59%), Postives = 92/174 (52.87%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQ 683
            +   G +GDLAK+K +P++FNLY++G+LQ +   I G AR  ++DDE +  +R  +   K       Q   F++   Y +        + +L KE     + K  ++G+  R+FY ++ P  + ++++ +K   +      G+ R+++EKPFG   D++ +L   +   F++ Q
Sbjct:    9 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKH-FAIVGTARQALNDDEFKQLVRDSI---KDFTDDQAQAEAFIEHFSYRAHDVTDAASYAVL-KEAIEEAADKFDIDGN--RIFYMSVAPRFFGTIAKYLKSEGLLADT--GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQ 173          
BLAST of FC930204 vs. ExPASy Swiss-Prot
Match: G6PD_CHLPN (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia pneumoniae GN=zwf PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 49/175 (28.00%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  162 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCM---NRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEE 677
            +++ GA+GDL  +K  PAL++L ++G L    V + G+AR + S++  R  ++  +I    +    +   +F Q + Y    +D   G+  L   +   E    +      RLFY + PP  +  +   + K  +   N+     W+R+++EKPFG+DLDS+++L   I E   E
Sbjct:   23 LVIFGATGDLTARKLLPALYHLTKEGRLSDQFVCV-GFARREKSNELFRQEMKQAVIQFSPSELDIKVWEDFQQRLFYHRSEFDNNMGYTSLKDSL---EDLDKTYGTRGNRLFYLSTPPQYFSRIIENLNKHKLFYKNQDQGKPWSRVIIEKPFGRDLDSAKQLQQCINENLNE 193          
The following BLAST results are available for this feature:
BLAST of FC930204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
G6PD_HAEIN2.078e-1832.39Glucose-6-phosphate 1-dehydrogenase OS=Haemophilus... [more]
G6PD_THEMA9.472e-1833.33Glucose-6-phosphate 1-dehydrogenase OS=Thermotoga ... [more]
G6PD_MYCTU2.756e-1725.64Glucose-6-phosphate 1-dehydrogenase OS=Mycobacteri... [more]
G6PD_MYCBO2.756e-1725.64Glucose-6-phosphate 1-dehydrogenase OS=Mycobacteri... [more]
G6PD_TREPA3.035e-1631.25Glucose-6-phosphate 1-dehydrogenase OS=Treponema p... [more]
G6PD_SYNY35.129e-1629.55Glucose-6-phosphate 1-dehydrogenase OS=Synechocyst... [more]
G6PD_BACSU8.672e-1627.59Glucose-6-phosphate 1-dehydrogenase OS=Bacillus su... [more]
G6PD_CHLMU1.902e-1531.33Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia m... [more]
G6PD_LEUME1.975e-1527.59Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc... [more]
G6PD_CHLPN4.400e-1528.00Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia p... [more]

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Properties
Property NameValue
Genbank descriptionC34004H05EF PostHarvC1 Citrus clementina cDNA clone C34004H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930204 ID=FC930204; Name=FC930204; organism=Citrus clementina; type=EST; length=707bp
GATCCTTGTTTTCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAAC
AGAGAGTAGGAGATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAG
TTTGAGGAATGATTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTG
GATGTCTTTCAATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAA
AAGACTTTTCCTGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTC
AAATGAAGTTCACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATG
AGCTGAGAAATCGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCG
GGACAATCAGAGCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAG
TGGTTCTTATGACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTT
CTGCACATGAATCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTC
TTTTATTTTGCACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGAT
TAAGAAGTGCTGCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTG
TTGTTGAGAAGCCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGT
GCCCAGATTGGGGAGTTGTTTGAAGAACCACAATCTACCGTATTGATCAC
TATTTGG
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