FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHIEC (Acetyl-coenzyme A synthetase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=acsA PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.581e-100
Identity = 154/241 (63.90%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   D+YWCT D GW+TGHSY++YGP+ N A+ ++FEG P +PD GR W+++DK+KV IFYTAPT +RSLM  G+++VTR SR SLR+LG+VGEPINP AW W++NVVGD RCP+ DTWWQTETGG MITPLPGA   KPGSAT PFFGV+P +VD +G  +EG   G LCI  SWPG  RT+YGDHER+  TYF  + G YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHEYVFDYHHGDIYWCTADVGWVTGHSYIVYGPLSNCATTLMFEGVPNFPDQGRFWEVIDKHKVNIFYTAPTAIRSLMGAGDDFVTRSSRSSLRLLGTVGEPINPEAWEWYYNVVGDKRCPVIDTWWQTETGGHMITPLPGAIDLKPGSATVPFFGVKPELVDNEGKVLEGAADGNLCIADSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PARL1 (Acetyl-coenzyme A synthetase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=acsA PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.581e-100
Identity = 157/241 (65.15%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ + T +Y FDY   D+YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YPD+ R W ++DK++V IFYTAPT +R+LMR+G E V + SRKSLR+LGSVGEPINP AW W+  VVGD RCPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQPVIVD +G   EG  +G LCI  SWPG  RT+YGDH+R+  TYF  +PG YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  278 YMVYASMTHQYVFDYHDGDIYWCTADVGWVTGHSYILYGPLANGATTLMFEGVPNYPDASRCWQVIDKHEVNIFYTAPTALRALMREGEEPVKKTSRKSLRLLGSVGEPINPEAWLWYHRVVGDGRCPIVDTWWQTETGGILISPLPGAIATKPGSATKPFFGVQPVIVDAEGNVQEGATTGNLCIDDSWPGQMRTVYGDHQRFVETYFIQYPGRYFTGDGCRRDEDGYYWITGRVDDVLN 518          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_METEP (Acetyl-coenzyme A synthetase OS=Methylobacterium extorquens (strain PA1) GN=acsA PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.581e-100
Identity = 158/241 (65.56%), Postives = 189/241 (78.42%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   DVYWCT D GW+TGHSY++YGP+ NGA+ ++FEG PTYP + R W+++DK+ V IFYTAPT +RSLM  G   V + SR+SLRVLGSVGEPINP AW W++ VVGDSRCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQPV+VD +G  ++G C G LCIK SWPG  RT+YGDHER+E TYF  +   YFTGDG  RD DGY+W+TGRVDDVIN
Sbjct:  280 YLVYASMTHQYVFDYHDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGIPTYPSNSRFWEVIDKHNVNIFYTAPTAIRSLMGGGEGPVKKTSRQSLRVLGSVGEPINPEAWDWYYRVVGDSRCPIVDTWWQTETGGILITPLPGATRLKPGSATLPFFGVQPVMVDAEGKILDGACEGNLCIKDSWPGQMRTVYGDHERFEQTYFSTYKDLYFTGDGARRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_AGRRK (Acetyl-coenzyme A synthetase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=acsA PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.581e-100
Identity = 158/241 (65.56%), Postives = 188/241 (78.01%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A T +Y FDY P D+YWCT D GW+TGHSY++YGP+ N A+ ++FEG P YPD GR WDI+DK+KV IFYTAPT +RSLM  G+ +V R SR SLR+LG+VGEPINP AW W++ VVGDSR PI DTWWQTETGG MITPLPGA   KPGSAT PFFGVQP +VD +G  +EG   G L I  SWPG  RT+YGDHER+  TYF  + G YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAAMTHEYTFDYHPGDIYWCTADVGWVTGHSYIVYGPLANAATSLMFEGVPNYPDQGRFWDIIDKHKVNIFYTAPTAIRSLMGAGDHFVKRSSRSSLRLLGTVGEPINPEAWEWYYKVVGDSRSPIVDTWWQTETGGHMITPLPGATDLKPGSATLPFFGVQPELVDSEGKVLEGAADGNLVIADSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SINMW (Acetyl-coenzyme A synthetase OS=Sinorhizobium medicae (strain WSM419) GN=acsA PE=3 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 3.523e-100
Identity = 154/241 (63.90%), Postives = 192/241 (79.67%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY+  D+YWCT D GW+TGHSY++YGP+ N A+ ++FEG P +PD+GR W++VDK+KV IFYTAPT +RSLM  G+++V R SR SLR+LG+VGEPINP AW W+++VVGD RCP+ DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP IVD +G  +EG   G LCI  SWPG  RT+YGDHER+  TYF  + G YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYQDGDIYWCTADVGWVTGHSYIVYGPLANAATTLMFEGVPNFPDAGRFWEVVDKHKVNIFYTAPTAIRSLMGAGDDFVKRSSRSSLRLLGTVGEPINPEAWEWYYHVVGDERCPVVDTWWQTETGGILITPLPGATDLKPGSATRPFFGVQPQIVDGEGNVVEGAADGNLCIIDSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_ALHEH (Acetyl-coenzyme A synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=acsA PE=3 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 3.523e-100
Identity = 154/241 (63.90%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  A T KY FDY+  +VYWCT D GW+TGHSY++YGP+ NGA+ ++FEG PTYP + R W++VDK+ V+IFYTAPT +R+LM  GNE+VT+ SRKSLR+LG+VGEPINP AW W++NVVGD RCPI DTWWQTETG  +I PLPGA   KPGSAT PFFGV+P +VD +G E+EG  SG L IK +WP   RT+YGDH+R+  TY   +PG YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  278 YLLGAAMTHKYVFDYQEGEVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPTYPSAARCWEVVDKHNVSIFYTAPTAIRALMGQGNEHVTKTSRKSLRILGTVGEPINPEAWEWYYNVVGDGRCPIVDTWWQTETGSILIAPLPGATDLKPGSATLPFFGVEPALVDPEGKELEGAASGNLVIKRAWPSMMRTVYGDHKRFMETYLAAYPGMYFTGDGARRDEDGYYWITGRVDDVIN 518          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA2_RHIME (Acetyl-coenzyme A synthetase 2 OS=Rhizobium meliloti GN=acsA2 PE=3 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 3.523e-100
Identity = 153/241 (63.49%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY+  D+YWCT D GW+TGHSY++YGP+ N A+ ++FEG P +PD+GR W++VDK+KV IFYTAPT +RSLM  G+++V R SR SLR+LG+VGEPINP AW W+++VVGD RCP+ DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP IVD  G  ++G   G LCI  SWPG  RT+YGDHER+  TYF  + G YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYQDGDIYWCTADVGWVTGHSYIVYGPLANAATTLMFEGVPNFPDAGRFWEVVDKHKVNIFYTAPTAIRSLMGAGDDFVKRSSRSSLRLLGTVGEPINPEAWEWYYHVVGDERCPVVDTWWQTETGGILITPLPGATDLKPGSATRPFFGVQPQIVDSDGKVVDGAADGNLCITDSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SYNFM (Acetyl-coenzyme A synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=acsA PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 4.601e-100
Identity = 156/241 (64.73%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+TA + +Y FDY   D+YWCT D GW+TGHSY++YGP+ NGA+ V+FEG P YPD  R W++VDK+K+ IFYTAPT +R+LMR G   V   SRKSL++LG+VGEPINP AW W++N VG+ RCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP I+D +G  ++G  SGYL IK SWPG  RT+YGDHER++ TYF  +PG YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  277 YLVYTALSHQYVFDYHDGDIYWCTADIGWVTGHSYIIYGPLANGATTVMFEGIPNYPDWSRFWNVVDKHKINIFYTAPTAIRALMRQGEAPVRATSRKSLKLLGTVGEPINPEAWLWYYNNVGEQRCPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPAIIDPEGKMLDGPGSGYLIIKESWPGMLRTVYGDHERFKQTYFSNYPGLYFTGDGARRDEDGYYWITGRVDDVIN 517          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHOP5 (Acetyl-coenzyme A synthetase OS=Rhodopseudomonas palustris (strain BisA53) GN=acsA PE=3 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 6.009e-100
Identity = 155/241 (64.32%), Postives = 189/241 (78.42%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V  + T +Y FDY   DVYWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YP + R W+++DK++V IFYTAPT +R+LM+ G+E VT+ SRKSLR+LGSVGEPINP AW W+  VVG+ RCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGV P I+D     +EGEC+G LC+  SWPG  RT+YGDH R+E TYF  +PG YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  278 YLVFASMTHQYVFDYHDGDVYWCTADVGWVTGHSYILYGPLANGATTLMFEGVPNYPTNSRFWEVIDKHQVNIFYTAPTAIRALMQGGDEPVTKTSRKSLRLLGSVGEPINPEAWEWYHRVVGEDRCPIVDTWWQTETGGILITPLPGATKLKPGSATRPFFGVVPQIMDADANVLEGECTGNLCLAKSWPGQMRTVYGDHARFEQTYFSAYPGKYFTGDGCRRDADGYYWITGRVDDVIN 518          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_AGRRH (Acetyl-coenzyme A synthetase OS=Agrobacterium rhizogenes GN=acsA PE=3 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.748e-99
Identity = 153/241 (63.49%), Postives = 191/241 (79.25%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY+  D+YWCT D GW+TGHSY++YGP+ N A+ ++FEG PT+PD+GR WD++DK+KV IFYTAPT +RSLM  G+++V R SR SLR+LGSVGEPINP AW W+++ VGD RCP+ DTWWQTETGG MITPLPGA   KPGSAT PFFG++P +VD +G  IEG   G LCI  SWPG  R++YGDHER+  TYF  + G YFTGDGC RD DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHEYVFDYQHGDIYWCTADVGWVTGHSYIVYGPLANCATTLMFEGIPTFPDAGRFWDVIDKHKVNIFYTAPTAIRSLMGAGDDFVKRSSRSSLRLLGSVGEPINPEAWEWYYHTVGDGRCPVVDTWWQTETGGIMITPLPGATDLKPGSATRPFFGIRPELVDAEGKLIEGAADGNLCIADSWPGQARSVYGDHERFIQTYFSTYEGKYFTGDGCRRDADGYYWITGRVDDVLN 521          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_RHIEC1.581e-10063.90Acetyl-coenzyme A synthetase OS=Rhizobium etli (st... [more]
ACSA_PARL11.581e-10065.15Acetyl-coenzyme A synthetase OS=Parvibaculum lavam... [more]
ACSA_METEP1.581e-10065.56Acetyl-coenzyme A synthetase OS=Methylobacterium e... [more]
ACSA_AGRRK1.581e-10065.56Acetyl-coenzyme A synthetase OS=Agrobacterium radi... [more]
ACSA_SINMW3.523e-10063.90Acetyl-coenzyme A synthetase OS=Sinorhizobium medi... [more]
ACSA_ALHEH3.523e-10063.90Acetyl-coenzyme A synthetase OS=Alkalilimnicola eh... [more]
ACSA2_RHIME3.523e-10063.49Acetyl-coenzyme A synthetase 2 OS=Rhizobium melilo... [more]
ACSA_SYNFM4.601e-10064.73Acetyl-coenzyme A synthetase OS=Syntrophobacter fu... [more]
ACSA_RHOP56.009e-10064.32Acetyl-coenzyme A synthetase OS=Rhodopseudomonas p... [more]
ACSA_AGRRH1.748e-9963.49Acetyl-coenzyme A synthetase OS=Agrobacterium rhiz... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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