FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHELP (Acetyl-coenzyme A synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=acsA PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.023e-92
Identity = 144/241 (59.75%), Postives = 180/241 (74.69%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDYK  ++YWCT D GWITGHSY++YGP+ NGA++++ EG P YP   R  +++D++KV I YTAPTL+R+LM +G E    +   SLR++GSVGEPINP AWRW+  V+G   CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD  G  I+G   G L I  SWPG  RT+YGDH+R+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  281 YLVYASMTHEYVFDYKEGEIYWCTADVGWITGHSYMVYGPLANGATILIHEGIPNYPTPARLGEMIDRHKVNILYTAPTLIRALMAEGKEQFDGFDGSSLRIMGSVGEPINPEAWRWYHEVIGHENCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIIDGAAEGNLVILDSWPGQMRTVYGDHDRFALTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVIN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SALTY (Acetyl-coenzyme A synthetase OS=Salmonella typhimurium GN=acs PE=1 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.023e-92
Identity = 145/241 (60.17%), Postives = 180/241 (74.69%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ ATTFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA+ ++FEG P +P   R   +VDK++V I YTAPT +R+LM +G++ +    R SLR+LGSVGEPINP AW W++  +G  +CP+ DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD +G   EG   G L I  SWPG  RTL+GDHER+E TYF  F   YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SALTI (Acetyl-coenzyme A synthetase OS=Salmonella typhi GN=acs PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.023e-92
Identity = 145/241 (60.17%), Postives = 180/241 (74.69%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ ATTFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA+ ++FEG P +P   R   +VDK++V I YTAPT +R+LM +G++ +    R SLR+LGSVGEPINP AW W++  +G  +CP+ DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD +G   EG   G L I  SWPG  RTL+GDHER+E TYF  F   YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHEFN (Acetyl-coenzyme A synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=acsA PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.027e-91
Identity = 146/241 (60.58%), Postives = 179/241 (74.27%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ + T +Y FDYK  +VYWCT D GWITGHSY++YGP  N A+V++ EG P +P   R  +++D++KV I YTAPTL+R+LM +G E  + Y   SLR++GSVGEPINP AWRW+  V+G   CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD  G  +EG   G L I  SWPG  RT+YGDH+R+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  281 YMVYASMTHEYVFDYKADEVYWCTADVGWITGHSYMVYGPFANAATVLIHEGVPNHPTPARLGEMIDRHKVNILYTAPTLIRALMAEGKEQFSSYKGDSLRIMGSVGEPINPEAWRWYHEVIGHENCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNMGDIVEGTGEGNLVILDSWPGQMRTVYGDHDRFALTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVIN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SYNAS (Acetyl-coenzyme A synthetase OS=Syntrophus aciditrophicus (strain SB) GN=acsA PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.342e-91
Identity = 146/241 (60.58%), Postives = 182/241 (75.52%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++ TA + ++ FDY   D+YWCT D GW+TGHSY +YGP+ NGA+ V+FEG P YPD  R W IVDK+ VTI YTAPT +R+LMR G+E V +  RK+LR+LG+VGEPINP AW W++NVVG+ RCPI DTWWQTETGG +ITP PGA   KPGSA  P+FGV+P I+D +G  +EG  +G L I   WPG  RT+YGDH+R+  TYF  + G YFTGDG  RD+DG +W+TGRVDDVIN
Sbjct:  277 YLLFTAMSHQHIFDYHDGDIYWCTADIGWVTGHSYTIYGPLANGATTVMFEGVPNYPDWSRFWRIVDKHGVTILYTAPTAIRALMRQGDEPVRKTFRKTLRLLGTVGEPINPEAWLWYYNVVGEKRCPIVDTWWQTETGGILITPFPGAMALKPGSAARPYFGVKPAIMDSEGRFLEGTGTGNLVITEPWPGMLRTIYGDHQRFLDTYFSTYKGVYFTGDGARRDEDGDYWITGRVDDVIN 517          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_ECO57 (Acetyl-coenzyme A synthetase OS=Escherichia coli O157:H7 GN=acs PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.289e-91
Identity = 143/241 (59.34%), Postives = 180/241 (74.69%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA+ ++FEG P +P   R   +VDK++V I YTAPT +R+LM +G++ +    R SLR+LGSVGEPINP AW W++  +G+ +CP+ DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD +G  +EG   G L I  SWPG  RTL+GDHER+E TYF  F   YF+GDG  RD+D Y+W+TGRVDDV+N
Sbjct:  281 YLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDSYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_VIBPA (Acetyl-coenzyme A synthetase OS=Vibrio parahaemolyticus GN=acsA PE=3 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 6.660e-91
Identity = 145/242 (59.92%), Postives = 179/242 (73.97%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE-CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY+P + +WCT D GWITGH+Y++YGP+ NGA  ++FEG P YP++ R  ++VDK++V I YTAPT +R+LM  GNE V   SR SLR++GSVGEPINP AW W++  +G+   PI DTWWQTETGG +I PLPGA   KPGSAT PFFGVQP +VD  G  +E     G L I  SWPG  RT+YGDHER+E TYF  F G YFT DG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAAMTFKYVFDYQPGETFWCTADVGWITGHTYLIYGPLANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAVAGTSRSSLRIMGSVGEPINPEAWEWYYKTIGNENSPIVDTWWQTETGGILIAPLPGATDLKPGSATRPFFGVQPALVDNMGNILEDTVAEGNLVILDSWPGQMRTVYGDHERFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLN 522          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PSESM (Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. tomato GN=acsA PE=3 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.484e-90
Identity = 146/241 (60.58%), Postives = 178/241 (73.86%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+++ A T +  FDYKP ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YPD  R   I+DK+KV I YTAPT +R++M +G + V      SLR+LGSVGEPINP AW W++N VG   CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGV P +VD  G  IEG   G L I  SWPG  RTLYGDH+R+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLLYAALTHERVFDYKPGEIYWCTADVGWVTGHSYIVYGPLANGATTLLFEGVPNYPDITRVSKIIDKHKVNILYTAPTAIRAMMAEGTKSVEGADGSSLRLLGSVGEPINPEAWGWYYNTVGKQNCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVIPALVDNLGNLIEGAAEGNLVILDSWPGQSRTLYGDHDRFVDTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_CAUCR (Acetyl-coenzyme A synthetase OS=Caulobacter crescentus GN=acsA PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.938e-90
Identity = 143/241 (59.34%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+   + TF   FDYKP +V+WCT D GW+TGHSYV+YGP+ NG + ++FEG P YP   R W+++DK++V+IFYTAPT +R+LMR+G+ +VT+    SLR+LGSVGEPINP AW W+  VVG  + PI DTWWQTETGG +ITPLPGA   KPGSA+ P  GV+P +VD +G  ++G   G L I  SWPG  RT+YGDH+R+  TYF  +PG YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  280 YLAWASWTFWAVFDYKPGEVFWCTADVGWVTGHSYVVYGPLANGGTSLIFEGVPNYPTPSRFWEVIDKHQVSIFYTAPTALRALMREGDAHVTKNDLSSLRLLGSVGEPINPEAWLWYHRVVGKEKLPIVDTWWQTETGGMLITPLPGATALKPGSASKPLPGVKPQLVDAEGKFLDGATEGNLVITDSWPGQMRTVYGDHQRFFETYFSTYPGKYFTGDGCRRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PSE14 (Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=acsA PE=3 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 4.317e-90
Identity = 145/241 (60.17%), Postives = 178/241 (73.86%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+++ A T +  FDYKP ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YPD  R   I+DK+KV I YTAPT +R++M +G + V      SLR+LGSVGEPINP AW W++N VG   CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGV P +VD  G  IEG   G L I  SWPG  R+LYGDH+R+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLLYAALTHERVFDYKPGEIYWCTADVGWVTGHSYIVYGPLANGATTLLFEGVPNYPDITRVSKIIDKHKVNILYTAPTAIRAMMAEGTKSVEGADGSSLRLLGSVGEPINPEAWGWYYNTVGKQNCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVIPALVDNLGNLIEGAAEGNLVILDSWPGQSRSLYGDHDRFVDTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVLN 521          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_SHELP6.023e-9259.75Acetyl-coenzyme A synthetase OS=Shewanella loihica... [more]
ACSA_SALTY6.023e-9260.17Acetyl-coenzyme A synthetase OS=Salmonella typhimu... [more]
ACSA_SALTI6.023e-9260.17Acetyl-coenzyme A synthetase OS=Salmonella typhi G... [more]
ACSA_SHEFN1.027e-9160.58Acetyl-coenzyme A synthetase OS=Shewanella frigidi... [more]
ACSA_SYNAS1.342e-9160.58Acetyl-coenzyme A synthetase OS=Syntrophus aciditr... [more]
ACSA_ECO572.289e-9159.34Acetyl-coenzyme A synthetase OS=Escherichia coli O... [more]
ACSA_VIBPA6.660e-9159.92Acetyl-coenzyme A synthetase OS=Vibrio parahaemoly... [more]
ACSA_PSESM1.484e-9060.58Acetyl-coenzyme A synthetase OS=Pseudomonas syring... [more]
ACSA_CAUCR1.938e-9059.34Acetyl-coenzyme A synthetase OS=Caulobacter cresce... [more]
ACSA_PSE144.317e-9060.17Acetyl-coenzyme A synthetase OS=Pseudomonas syring... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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