FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_DEIRA (Acetyl-coenzyme A synthetase OS=Deinococcus radiodurans GN=acsA PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.939e-86
Identity = 141/241 (58.51%), Postives = 171/241 (70.95%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV T  T +  FD +  D+YWCT D GWITGHSY +YGP+LNGA+VV++EGAP  PD GR WDIV K++VTI YTAPT +RS M+ G+E   RY   SLR+LGSVGEPINP AW W++ V+G  RCP+ DTWWQTETG  M+T LPGA+P KPGSA  P FGV+P ++   G EI  +  G L IK  WP   RT+YGD ERY  +Y+   P  YF GDG  RD DGY+ + GRVDDV+N
Sbjct:  287 YMVGTYLTTQTVFDLRDDDIYWCTADIGWITGHSYSVYGPLLNGATVVMYEGAPNQPDWGRFWDIVQKHRVTILYTAPTAIRSFMQHGDEIPGRYDLASLRLLGSVGEPINPEAWMWYYRVIGGERCPVVDTWWQTETGSIMLTTLPGAFPSKPGSAGLPMFGVEPALMTRDGEEIGDDDGGLLVIKRPWPSMLRTVYGDDERYRKSYWGEIPHVYFAGDGARRDHDGYYTIVGRVDDVLN 527          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PSYA2 (Acetyl-coenzyme A synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=acsA PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.132e-85
Identity = 127/241 (52.70%), Postives = 172/241 (71.37%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+ +  +TF+  FD K  DVYWCT D GW+TGH+Y  Y P+ NG + V+FEG P YP   R   I+DK+++T+ YTAPT +R++M++G+ +V    R SLR+LG+VGEPINP AW W++++VG  +CP+ DTWWQTETGG M+ P+PG    KPG+   P +G+ P ++D  GV +EG   G L I  SWPG  RT+Y DH R+  TYF  +PGYYFTGDG  RD+DG++W+TGRVDDV+N
Sbjct:  283 YITYALSTFRDVFDVKDDDVYWCTADVGWVTGHTYATYAPLANGTTTVMFEGVPEYPTWARIGHIIDKHQITVLYTAPTAIRAMMKEGDTFVRESDRSSLRLLGTVGEPINPEAWDWYYHIVGGGKCPVVDTWWQTETGGIMLAPIPGTVAMKPGAVMNPLYGIIPEVIDTDGVALEGAAEGNLVINGSWPGQMRTIYKDHARFLETYFTEYPGYYFTGDGVQRDEDGHYWITGRVDDVLN 523          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RUBXD (Acetyl-coenzyme A synthetase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=acsA PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.710e-84
Identity = 138/241 (57.26%), Postives = 172/241 (71.37%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+ H  TT  + FD K  DVYWCT D GW+TGHSY++YGP+ NGA+ ++FEG P+YP + R WDI++++ VTI YTAPT +R+ M+ G   + ++   SLR+LGSVGEPINP AW W+   VG  RCP+ DTWWQTETGG MI+PLPG    KPGSATFP  G+   I DE+G EIEG   G L IK  WPG  RTLY D ER+  TY++ +   YF+GDG  RD+DGY W+TGRVDDVIN
Sbjct:  277 YLTHVNTTTDWVFDLKEDDVYWCTADIGWVTGHSYIVYGPLSNGATALMFEGTPSYPANDRWWDIIERHGVTILYTAPTAIRAFMKQGPGPIEKHDLSSLRLLGSVGEPINPRAWEWYHEHVGGGRCPVVDTWWQTETGGIMISPLPGITRTKPGSATFPLPGIFAGIYDEEGNEIEGPGVGNLVIKRPWPGMLRTLYKDPERFRETYWQKYGDVYFSGDGARRDEDGYFWVTGRVDDVIN 517          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_THET8 (Acetyl-coenzyme A synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=acsA PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.996e-83
Identity = 140/242 (57.85%), Postives = 172/242 (71.07%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEG-ECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YM +   T K  FD K  DVYWCT D GWITGHSYV+YGP+LNGA+ V++EGAP +P+  R W IVDKY VT+FYTAPT +RS M+ G  +  ++   SLR+LG+VGEPINP AW W+++V+G  RCPI DTWWQTETGG MIT LPGA   KPG A  PFFGV P I+D +   +E  +  G+LCI   WP   RT++GD ER+   YF   PG YF+GDG  RDKDGY+ + GRVDDV+N
Sbjct:  283 YMTYVYYTTKLVFDLKDEDVYWCTADVGWITGHSYVVYGPLLNGATTVMYEGAPNWPEPDRFWRIVDKYGVTVFYTAPTAIRSFMKWGEGWPGKHRLDSLRLLGTVGEPINPEAWLWYYHVIGKGRCPIVDTWWQTETGGIMITTLPGAHAMKPGHAGKPFFGVVPEILDGEHRPVENPDEGGHLCITRPWPSMLRTVWGDPERFLQQYFSQHPGVYFSGDGAKRDKDGYYMILGRVDDVLN 524          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_THET2 (Acetyl-coenzyme A synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=acsA PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.996e-83
Identity = 140/242 (57.85%), Postives = 172/242 (71.07%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEG-ECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YM +   T K  FD K  DVYWCT D GWITGHSYV+YGP+LNGA+ V++EGAP +P+  R W IVDKY VT+FYTAPT +RS M+ G  +  ++   SLR+LG+VGEPINP AW W+++V+G  RCPI DTWWQTETGG MIT LPGA   KPG A  PFFGV P I+D +   +E  +  G+LCI   WP   RT++GD ER+   YF   PG YF+GDG  RDKDGY+ + GRVDDV+N
Sbjct:  283 YMTYVYYTTKLVFDLKDEDVYWCTADVGWITGHSYVVYGPLLNGATTVMYEGAPNWPEPDRFWRIVDKYGVTVFYTAPTAIRSFMKWGEGWPGKHRLDSLRLLGTVGEPINPEAWLWYYHVIGKGRCPIVDTWWQTETGGIMITTLPGAHAMKPGHAGKPFFGVVPEILDGEHRPVENPDEGGHLCITRPWPSMLRTVWGDPERFLQQYFSQHPGVYFSGDGAKRDKDGYYMILGRVDDVLN 524          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACS2L_MOUSE (Acetyl-coenzyme A synthetase 2-like, mitochondrial OS=Mus musculus GN=Acss1 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.536e-82
Identity = 137/244 (56.15%), Postives = 172/244 (70.49%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQK--PGSATFPFFGVQPVIVDEKGVEIE-GECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+++ A T K  FDY+P DV+ C  D GWITGHSYV+YGP+ NGA+ V+FE  P YPD+GR W+ V + K+  FY APT VR L++ G+ +V +Y R SLR LGSVGEPIN  AW W   VVGD RC + DTWWQTETGG  I P P     +  PG A  PFFG+ PV++DEKG  +E G+ SG LCI  +WPG  RT+YGDH+R+   YF+ +PGYYFTGDG  R + GY+ +TGR+DDVIN
Sbjct:  304 YLLYAAMTHKLVFDYQPGDVFGCVADIGWITGHSYVVYGPLCNGATTVLFESTPVYPDAGRYWETVQRLKINQFYGAPTAVRLLLKYGDAWVKKYDRSSLRTLGSVGEPINHEAWEWLHKVVGDGRCTLVDTWWQTETGGICIAPRPSEDGAEILPGMAMRPFFGIVPVLMDEKGNVLEGGDVSGALCISQAWPGMARTIYGDHQRFVDAYFRAYPGYYFTGDGAHRTEGGYYQITGRMDDVIN 547          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_CHRVO (Acetyl-coenzyme A synthetase OS=Chromobacterium violaceum GN=acsA PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.313e-82
Identity = 136/243 (55.97%), Postives = 175/243 (72.02%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYF-KPFPG-YYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++    +F++ FDYKP+DV+WCT D GWITGHSYV YGP+ NGA+ V+FEG PTYPD+GR W +++++KV+IFYTAPT +RSL++ G++   +Y   SLRVLG+VGEPINP AW W++  VG  RCPI DTWWQTETG  MI PLPGA   KPGS T P  GV   IVDE G ++E    G+L IK  +P   RT++ D ER++ TYF   F G YY  GD   RD++GY W+ GR+DDV+N
Sbjct:  286 YLLGALNSFRWVFDYKPNDVFWCTADVGWITGHSYVCYGPLANGATQVIFEGVPTYPDAGRFWKMIEQHKVSIFYTAPTAIRSLIKLGSDLPKQYDLSSLRVLGTVGEPINPEAWIWYYETVGGGRCPIVDTWWQTETGSTMIAPLPGAIATKPGSCTLPLPGVIADIVDESGAQVEPGRGGFLVIKKPFPSLVRTIWNDPERFKKTYFPDEFDGKYYLAGDSAHRDENGYFWIMGRIDDVLN 528          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_LARHH (Acetyl-coenzyme A synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=acsA PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.327e-82
Identity = 134/243 (55.14%), Postives = 176/243 (72.43%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYF-KPFPG-YYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  A +F++AFDYKP+D+YWCT D GWITGHSY+ YGP+  GA+ VVFEG PTYPD+GR W +++++KV IFYTAPT +RSL++ G +   ++   SLRVLG+VGEPINP AW W++ VVG  RCPI DTWWQTETG  MI P+PGA   KPGS T P  G+   IVDE G ++E    G+L IK  +P   RT++ D +R++ TYF + F G YY  GD  +RD+ GY W+ GR+DDV+N
Sbjct:  285 YLLGAANSFRWAFDYKPNDIYWCTADVGWITGHSYICYGPLAMGATQVVFEGIPTYPDAGRFWRMIEQHKVNIFYTAPTAIRSLIKLGADLPKQFDLSSLRVLGTVGEPINPEAWMWYYEVVGGGRCPIVDTWWQTETGSAMIAPMPGAVATKPGSCTLPLPGIMADIVDESGAQVEPGRGGFLVIKKPFPSLVRTIWNDPDRFKKTYFPEEFNGQYYLAGDSANRDESGYFWIMGRIDDVLN 527          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PASMU (Acetyl-coenzyme A synthetase OS=Pasteurella multocida GN=acsA PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.644e-81
Identity = 133/243 (54.73%), Postives = 168/243 (69.14%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++    +F+  FD KP+D++WCT D GWITGHSYV YGP+ NGA+ V+FEG PTYPD GR W ++ ++K+ +FYT+PTL+RSL R G+    +Y   SLR+LGSVGEPINPSAW WF+ VVG SRCPI DTWWQTETG  M+ P+PG    KPGS T P  G+   ++DE G +   E  G L IK  +P   RT++ D ERY++TYF    G  YY  GD   RDKDGY W+ GR DDV+N
Sbjct:  284 YLLGALNSFRNVFDNKPNDIFWCTADVGWITGHSYVCYGPLANGATQVIFEGVPTYPDPGRIWRMIQRHKINVFYTSPTLIRSLTRLGDHIPNKYDLSSLRLLGSVGEPINPSAWMWFYEVVGKSRCPIVDTWWQTETGSIMLAPIPGVTATKPGSCTLPLPGIMAEVLDENGQKCAVEQGGALAIKRPFPSMLRTIWNDPERYKSTYFPAEYGGKYYIAGDNAHRDKDGYFWILGRTDDVLN 526          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHOBA (Acetyl-coenzyme A synthetase OS=Rhodopirellula baltica GN=acsA PE=3 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.663e-81
Identity = 131/241 (54.36%), Postives = 168/241 (69.71%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y +    TF++ FD++  DVYWCT DCGWITGHSYV+YGP+  GA+ +++EGAP +P   R WDIV+++KV+I YTAPT VR+ ++ G+E+V ++   SLR+LGSVGE INP AW W+   +G  +CPI DTWWQTETGG M++PLPG  P KPGS T P  GV P IVDE G  ++ E  G LCI   WPG  R +YGD ER+   Y+   P  Y TGD    D DGY+W+ GR+DDVIN
Sbjct:  309 YNLWAKRTFEWVFDHREGDVYWCTADCGWITGHSYVVYGPLSAGATCLMYEGAPNFPAEDRFWDIVERHKVSILYTAPTAVRAFIKWGDEHVDKHDLSSLRLLGSVGEGINPEAWMWYHKKIGGEKCPIVDTWWQTETGGIMMSPLPGITPTKPGSCTRPLPGVVPSIVDELGNSVDSEHGGKLCISQPWPGMLRGIYGDEERFVEQYWSDVPDKYLTGDNARCDTDGYYWIMGRIDDVIN 549          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_DEIRA4.939e-8658.51Acetyl-coenzyme A synthetase OS=Deinococcus radiod... [more]
ACSA_PSYA27.132e-8552.70Acetyl-coenzyme A synthetase OS=Psychrobacter arct... [more]
ACSA_RUBXD2.710e-8457.26Acetyl-coenzyme A synthetase OS=Rubrobacter xylano... [more]
ACSA_THET82.996e-8357.85Acetyl-coenzyme A synthetase OS=Thermus thermophil... [more]
ACSA_THET22.996e-8357.85Acetyl-coenzyme A synthetase OS=Thermus thermophil... [more]
ACS2L_MOUSE2.536e-8256.15Acetyl-coenzyme A synthetase 2-like, mitochondrial... [more]
ACSA_CHRVO3.313e-8255.97Acetyl-coenzyme A synthetase OS=Chromobacterium vi... [more]
ACSA_LARHH4.327e-8255.14Acetyl-coenzyme A synthetase OS=Laribacter hongkon... [more]
ACSA_PASMU1.644e-8154.73Acetyl-coenzyme A synthetase OS=Pasteurella multoc... [more]
ACSA_RHOBA3.663e-8154.36Acetyl-coenzyme A synthetase OS=Rhodopirellula bal... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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