FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRUME (Acetyl-coenzyme A synthetase OS=Brucella melitensis GN=acsA PE=3 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 1.480e-98
Identity = 151/241 (62.66%), Postives = 190/241 (78.84%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P +PD GR W++VDK+ V IFYTAPT +R+LM  G+E+VTR SR +LR+LGSVGEPINP AW W++NVVGD +CPI DTWWQTE GG +ITPLPGA   KPGSAT PFFGV+PV+VD +G   EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YF+GDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYHDGEIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNFPDQGRFWEVVDKHHVNIFYTAPTALRALMGAGDEFVTRSSRSTLRLLGSVGEPINPEAWEWYYNVVGDQKCPIVDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVDDVLN 521
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRUC2 (Acetyl-coenzyme A synthetase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=acsA PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.480e-98
Identity = 151/241 (62.66%), Postives = 190/241 (78.84%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P +PD GR W++VDK+ V IFYTAPT +R+LM  G+E+VTR SR +LR+LGSVGEPINP AW W++NVVGD +CPI DTWWQTE GG +ITPLPGA   KPGSAT PFFGV+PV+VD +G   EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YF+GDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYHDGEIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNFPDQGRFWEVVDKHHVNIFYTAPTALRALMGAGDEFVTRSSRSTLRLLGSVGEPINPEAWEWYYNVVGDQKCPIVDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVDDVLN 521
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRUAB (Acetyl-coenzyme A synthetase OS=Brucella abortus GN=acsA PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.480e-98
Identity = 151/241 (62.66%), Postives = 190/241 (78.84%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P +PD GR W++VDK+ V IFYTAPT +R+LM  G+E+VTR SR +LR+LGSVGEPINP AW W++NVVGD +CPI DTWWQTE GG +ITPLPGA   KPGSAT PFFGV+PV+VD +G   EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YF+GDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYHDGEIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNFPDQGRFWEVVDKHHVNIFYTAPTALRALMGAGDEFVTRSSRSTLRLLGSVGEPINPEAWEWYYNVVGDQKCPIVDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVDDVLN 521
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRUA2 (Acetyl-coenzyme A synthetase OS=Brucella abortus (strain 2308) GN=acsA PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.480e-98
Identity = 151/241 (62.66%), Postives = 190/241 (78.84%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P +PD GR W++VDK+ V IFYTAPT +R+LM  G+E+VTR SR +LR+LGSVGEPINP AW W++NVVGD +CPI DTWWQTE GG +ITPLPGA   KPGSAT PFFGV+PV+VD +G   EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YF+GDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYHDGEIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNFPDQGRFWEVVDKHHVNIFYTAPTALRALMGAGDEFVTRSSRSTLRLLGSVGEPINPEAWEWYYNVVGDQKCPIVDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVDDVLN 521
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRUA1 (Acetyl-coenzyme A synthetase OS=Brucella abortus (strain S19) GN=acsA PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.480e-98
Identity = 151/241 (62.66%), Postives = 190/241 (78.84%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P +PD GR W++VDK+ V IFYTAPT +R+LM  G+E+VTR SR +LR+LGSVGEPINP AW W++NVVGD +CPI DTWWQTE GG +ITPLPGA   KPGSAT PFFGV+PV+VD +G   EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YF+GDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYHDGEIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNFPDQGRFWEVVDKHHVNIFYTAPTALRALMGAGDEFVTRSSRSTLRLLGSVGEPINPEAWEWYYNVVGDQKCPIVDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVDDVLN 521
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BDEBA (Acetyl-coenzyme A synthetase OS=Bdellovibrio bacteriovorus GN=acsA PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.480e-98
Identity = 153/241 (63.49%), Postives = 189/241 (78.42%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   D+YWC+ D GW+TGHSY++YGP+ NGA+ + FEG P YP   R W++VDK+KVTIFYT+PT +RSLMR+G+  V   SRK+LR+LGSVGEPINP AW W+ +VVG+ RCP+ DTWWQTETGG +ITPLPGA  QKPGSAT PFFGVQP ++  +G EI G   G L I  SWPG  RT+Y +HER+E TYF  +PGYYFTGDGC RD+DGY+W+TGRVDDVIN
Sbjct:  278 YLVYASMTHQYVFDYHEDDIYWCSADVGWVTGHSYIVYGPLANGATSLFFEGVPNYPTPSRFWEVVDKHKVTIFYTSPTAIRSLMREGDAAVKTTSRKTLRLLGSVGEPINPEAWAWYHDVVGEGRCPVVDTWWQTETGGILITPLPGAIAQKPGSATLPFFGVQPKLLTNEGQEIHGPGEGVLVIADSWPGQMRTVYRNHERFEDTYFSNYPGYYFTGDGCRRDQDGYYWITGRVDDVIN 518
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRASO (Acetyl-coenzyme A synthetase OS=Bradyrhizobium sp. (strain ORS278) GN=acsA PE=3 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.933e-98
Identity = 155/241 (64.32%), Postives = 187/241 (77.59%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   DVYWCT D GW+TGHSY++YGP+ NGA  ++FEG P YPD+ R W+++DK+KV IFYTAPT +R+LM+ G+  VT+ SR+SLR+LGSVGEPINP AW W+  VVGD+RCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGV P IVD  G  +EG   G LC+  SWPG  RT+YGDH R+E TYF  + G YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  278 YLVYASMTHQYVFDYHEGDVYWCTADVGWVTGHSYILYGPLANGAVTLMFEGVPNYPDNSRFWNVIDKHKVNIFYTAPTAIRALMQGGDGPVTKTSRESLRLLGSVGEPINPEAWEWYHRVVGDNRCPIVDTWWQTETGGILITPLPGATRLKPGSATRPFFGVVPEIVDADGNTLEGATEGNLCLTRSWPGQMRTVYGDHARFEMTYFSTYKGKYFTGDGCRRDADGYYWITGRVDDVIN 518
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRAJA (Acetyl-coenzyme A synthetase OS=Bradyrhizobium japonicum GN=acsA PE=1 SV=2)

HSP 1 Score: 358.221 bits (918), Expect = 2.525e-98
Identity = 153/241 (63.49%), Postives = 187/241 (77.59%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A T +Y FDY   D+YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YPD+ R W+++DK+KV  FYTAPT +R+LM+ G+E V + SR SLR+LGSVGEPINP AW W+  VVG+ RCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGV P IVD  G  +EGE +G LC+  +WPG  RT+YGDH R+E TYF  + G YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  278 YLVYAAMTHQYVFDYHDGDIYWCTADVGWVTGHSYILYGPLANGATTLMFEGVPNYPDNSRFWNVIDKHKVNTFYTAPTAIRALMQGGDEPVKKTSRASLRLLGSVGEPINPEAWEWYHRVVGEDRCPIVDTWWQTETGGILITPLPGATKLKPGSATQPFFGVVPEIVDADGKVLEGETTGNLCLTRAWPGMMRTVYGDHARFEQTYFSTYKGKYFTGDGCRRDADGYYWITGRVDDVIN 518
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_XANOM (Acetyl-coenzyme A synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=acsA PE=3 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 9.594e-98
Identity = 152/241 (63.07%), Postives = 191/241 (79.25%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  + T +  FD +  D+YWCT D GW+TGHSY++YGP+ NGA+ V+FEG P YP+  R W+++DK++VTIFYTAPT +R+LMRDG E V + SRKSLR+LGSVGEPINP AWRW+++VVGDSRCPI DTWWQTETGG +I+PL GA   KPGSAT PFFGVQP +VD +G  +EG   G L +  SWPG  R++YGDH+R+  TYF+ +PG YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  280 YLLFASYTHEVVFDLREDDIYWCTADVGWVTGHSYIVYGPLANGATAVMFEGVPNYPNVSRFWEVIDKHQVTIFYTAPTAIRALMRDGAEPVKKTSRKSLRLLGSVGEPINPEAWRWYYDVVGDSRCPIVDTWWQTETGGILISPLAGAVDLKPGSATLPFFGVQPALVDAEGKILEGATEGNLVLLDSWPGQMRSVYGDHQRFIDTYFRTYPGSYFTGDGCRRDADGYYWITGRVDDVIN 520
[Close]
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHISN (Acetyl-coenzyme A synthetase OS=Rhizobium sp. (strain NGR234) GN=acsA PE=3 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 9.594e-98
Identity = 151/241 (62.66%), Postives = 189/241 (78.42%), Query Frame = 3 
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   D+YWCT D GW+TGHSY++YGP+ N A+ ++FEG P +PD+GR W+++DK+KV IFYTAPT +RSLM  G+++V R SR SLR+LG+VGEPINP AW W+++VVG  R PI DTWWQTETGG +ITPLPGA   KPGSAT PFFGV+P IVD +G  I+G   G LCI  SWPG  RT+YGDHER+  TYF  + G YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYHDGDIYWCTADVGWVTGHSYIVYGPLANAATTLMFEGVPNFPDAGRFWEVIDKHKVNIFYTAPTAIRSLMGAGDDFVNRSSRSSLRLLGTVGEPINPEAWEWYYHVVGAERSPIVDTWWQTETGGILITPLPGATDLKPGSATRPFFGVKPQIVDNEGNVIDGPADGNLCITDSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLN 521
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_BRUME1.480e-9862.66Acetyl-coenzyme A synthetase OS=Brucella melitensi... [more]
ACSA_BRUC21.480e-9862.66Acetyl-coenzyme A synthetase OS=Brucella canis (st... [more]
ACSA_BRUAB1.480e-9862.66Acetyl-coenzyme A synthetase OS=Brucella abortus G... [more]
ACSA_BRUA21.480e-9862.66Acetyl-coenzyme A synthetase OS=Brucella abortus (... [more]
ACSA_BRUA11.480e-9862.66Acetyl-coenzyme A synthetase OS=Brucella abortus (... [more]
ACSA_BDEBA1.480e-9863.49Acetyl-coenzyme A synthetase OS=Bdellovibrio bacte... [more]
ACSA_BRASO1.933e-9864.32Acetyl-coenzyme A synthetase OS=Bradyrhizobium sp.... [more]
ACSA_BRAJA2.525e-9863.49Acetyl-coenzyme A synthetase OS=Bradyrhizobium jap... [more]
ACSA_XANOM9.594e-9863.07Acetyl-coenzyme A synthetase OS=Xanthomonas oryzae... [more]
ACSA_RHISN9.594e-9862.66Acetyl-coenzyme A synthetase OS=Rhizobium sp. (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
back to top