FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_NOVAD (Acetyl-coenzyme A synthetase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=acsA PE=3 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 9.594e-98
Identity = 153/241 (63.49%), Postives = 187/241 (77.59%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y V  + T +Y FDY+P  +YWC  D GW+TGHSYV+YGP++NGA+ V+FEG P +PD+ R W +VDK+KV IFY APT +R+LMR+G+E+V + SR SLR+LGSVGEPINP AW W+  VVGDSRCPI DTWWQTETGG MITPLPGA   KPGSA+ PFFGV+P +VD  G  +EG   G L +  SWPG  RT++GDHER+  TYF  F G YFTGDGC RD+DGY+W+TGR+DDVIN
Sbjct:  279 YSVWASMTHQYVFDYRPGQIYWCAADIGWVTGHSYVVYGPLMNGATTVMFEGVPNFPDASRFWQVVDKFKVEIFYGAPTALRALMREGDEWVKKTSRASLRLLGSVGEPINPEAWEWYHKVVGDSRCPIVDTWWQTETGGAMITPLPGATALKPGSASRPFFGVKPALVDNDGTFLEGATDGCLVVTDSWPGQMRTVWGDHERFFQTYFTTFKGLYFTGDGCRRDEDGYYWITGRIDDVIN 519          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BARHE (Acetyl-coenzyme A synthetase OS=Bartonella henselae GN=acsA PE=3 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 9.594e-98
Identity = 154/241 (63.90%), Postives = 187/241 (77.59%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T KY FDY   ++YWCT D GWITGHSY++YGP+ N A+ ++FEG PT+PD+GR W+IVDK++V IFYTAPT +R+LM  GN +V R  R SLR+LGSVGEPINP AW WF++ VG++ CPI DTWWQTETGG MITPLPGA P K GSAT PFFGVQ  I+D +G  +EGE  G LCI  SWPG  RTLY DHER+  TYF  + G YFTGDGC RD DGY+W+TGRVDD++N
Sbjct:  281 YLVYASMTHKYVFDYHAGEIYWCTADIGWITGHSYLVYGPLCNAATTLMFEGTPTFPDNGRFWEIVDKHQVNIFYTAPTAIRALMGAGNSFVERSKRTSLRLLGSVGEPINPEAWEWFYHTVGNNHCPILDTWWQTETGGHMITPLPGATPLKAGSATRPFFGVQLQIIDAEGNVLEGETEGNLCIIDSWPGQMRTLYNDHERFIQTYFSTYKGKYFTGDGCRRDSDGYYWITGRVDDILN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BARBK (Acetyl-coenzyme A synthetase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=acsA PE=3 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 9.594e-98
Identity = 151/241 (62.66%), Postives = 190/241 (78.84%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY P ++YWCT D GWITGHSY++YGP+ NGA+ ++FEG+PT+PD GR W+IVDK+KV IFYTAPT +R+LM  G+ +V R  R SLR+LG+VGEPINP AW+WF++ VGDSRCPI DTWWQTETGG +ITPLPGA   K GSAT PFFG+Q  +VD +G  ++GE  G LCI  SWPG  RTLY +H+R+  TYF  + G YFTGDGC RDKD Y+W+TGRVDD++N
Sbjct:  281 YLVYASMTHQYVFDYHPGEIYWCTADIGWITGHSYLVYGPLCNGATTLMFEGSPTFPDEGRFWEIVDKHKVNIFYTAPTAIRALMGAGDSFVKRSQRTSLRLLGTVGEPINPEAWKWFYHTVGDSRCPILDTWWQTETGGHIITPLPGATKLKAGSATHPFFGIQVQLVDPQGNILKGEAEGNLCIVDSWPGQMRTLYNNHQRFVETYFSTYKGKYFTGDGCKRDKDSYYWITGRVDDILN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_HALHL (Acetyl-coenzyme A synthetase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=acsA PE=3 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.253e-97
Identity = 149/241 (61.83%), Postives = 190/241 (78.84%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++ TA T KY FDY+  +VYWCT D GW+TGHSY++YGP+ NGA  ++FEG PTYPD+GR W +VDK++V+IFYTAPT +R+LM  G+++V + SRKSLR+LG+VGEPINP AW W+++ +G+ RCPI DTWWQTETG  +I PLPGA   KPGSAT PFFGV+P +VD+KG  +EG  +G L I  +WP   RT+YGDHER+  TY   +PG YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  278 YLLGTAMTHKYIFDYQDGEVYWCTADVGWVTGHSYIVYGPLANGAKTLMFEGVPTYPDAGRFWQVVDKHEVSIFYTAPTAIRALMGQGDDHVKKTSRKSLRILGTVGEPINPEAWEWYYHTIGEDRCPIVDTWWQTETGSILIAPLPGAMDLKPGSATLPFFGVEPQLVDDKGNVLEGATNGNLVINRAWPSMMRTIYGDHERFFNTYLAAYPGKYFTGDGARRDEDGYYWITGRVDDVIN 518          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_METSB (Acetyl-coenzyme A synthetase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=acsA PE=3 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.636e-97
Identity = 154/241 (63.90%), Postives = 186/241 (77.18%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V  + T +Y FDY+P +VYWCT D GW+TGHSY++YGP+ NGA+ ++FEG P+YP   R WD+VDK++V IFYTAPT +RSLM  G+  V   SRK+LRVLGSVGEPINP AW W++ VVG+ RCPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD  G  +EG CSG L I  SWP   RTL+ DHER+   YF  +PG YFTGDGC RD+DGY+W+TGRVDDVIN
Sbjct:  279 YLVWASMTHQYVFDYRPGEVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPSYPTISRFWDVVDKHQVNIFYTAPTAIRSLMGAGDGPVKATSRKTLRVLGSVGEPINPEAWEWYYRVVGEERCPIVDTWWQTETGGILISPLPGATALKPGSATQPFFGVQPQVVDAAGEVLEGPCSGNLVIADSWPAQMRTLFNDHERFVQAYFSAYPGKYFTGDGCRRDEDGYYWITGRVDDVIN 519          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BRUMB (Acetyl-coenzyme A synthetase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=acsA PE=3 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.636e-97
Identity = 150/241 (62.24%), Postives = 189/241 (78.42%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   ++YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P +PD GR W++VDK+ V IFYTAPT +R+LM  G+E+VTR SR +LR+LGSVGEPINP AW W++NVVGD +CPI DTWWQTE GG +ITPLPGA   KPGSAT PFFGV+PV+VD +G   E    G LCI  SWPG  RT+YGDH+R+  TYF  + G YF+GDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASMTHQYVFDYHDGEIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNFPDQGRFWEVVDKHHVNIFYTAPTALRALMGAGDEFVTRSSRSTLRLLGSVGEPINPEAWEWYYNVVGDQKCPIVDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQECVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_LEPIN (Acetyl-coenzyme A synthetase OS=Leptospira interrogans GN=acsA PE=3 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.137e-97
Identity = 157/243 (64.61%), Postives = 184/243 (75.72%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEI--EGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++    TF Y FD KP D YWCT D GW+TGHSY++YGP+ NGAS V+FEG P+YPD+GR WD++DKY V IFYTAPT +R+LMR+G  ++ +    SLR+LGSVGEPINP AW W+F  +G  +CPI DTWWQTETG  MIT LPGA PQKPGSAT PFFGVQPV+VD  G EI  +GE SG LCIK  WP   R +YGD +R+  TYF  F GYYFTGDG  RDKDGY W+TGRVDDVIN
Sbjct:  290 YLLGANLTFHYVFDIKPEDTYWCTADIGWVTGHSYLVYGPLSNGASSVMFEGVPSYPDAGRFWDVIDKYGVNIFYTAPTAIRALMREGLNHIQKRDLSSLRLLGSVGEPINPEAWEWYFKNIGKGKCPIVDTWWQTETGSIMITALPGAIPQKPGSATLPFFGVQPVLVDNDGKEITDKGEVSGNLCIKGPWPSMMRGVYGDPKRFFETYFSQFKGYYFTGDGARRDKDGYFWITGRVDDVIN 532          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_LEPIC (Acetyl-coenzyme A synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=acsA PE=3 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.137e-97
Identity = 157/243 (64.61%), Postives = 184/243 (75.72%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEI--EGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++    TF Y FD KP D YWCT D GW+TGHSY++YGP+ NGAS V+FEG P+YPD+GR WD++DKY V IFYTAPT +R+LMR+G  ++ +    SLR+LGSVGEPINP AW W+F  +G  +CPI DTWWQTETG  MIT LPGA PQKPGSAT PFFGVQPV+VD  G EI  +GE SG LCIK  WP   R +YGD +R+  TYF  F GYYFTGDG  RDKDGY W+TGRVDDVIN
Sbjct:  290 YLLGANLTFHYVFDIKPEDTYWCTADIGWVTGHSYLVYGPLSNGASSVMFEGVPSYPDAGRFWDVIDKYGVNIFYTAPTAIRALMREGLNHIQKRDLSSLRLLGSVGEPINPEAWEWYFKNIGKGKCPIVDTWWQTETGSIMITALPGAIPQKPGSATLPFFGVQPVLVDNDGKEITDKGEVSGNLCIKGPWPSMMRGVYGDPKRFFETYFSQFKGYYFTGDGARRDKDGYFWITGRVDDVIN 532          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_XANAC (Acetyl-coenzyme A synthetase OS=Xanthomonas axonopodis pv. citri GN=acsA PE=3 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.791e-97
Identity = 151/241 (62.66%), Postives = 190/241 (78.84%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  + T +  FD +  D+YWCT D GW+TGHSY++YGP+ NGA+ V+FEG P YP+  R W+++DK++VTIFYTAPT +R+LMRDG + V + SRKSLR+LGSVGEPINP AWRW++ VVGDSRCPI DTWWQTETGG +I+PL GA   KPGSAT PFFGVQP +VD +G  +EG   G L +  SWPG  R++YGDH+R+  TYF+ +PG YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  280 YLLFASYTHEVVFDLREDDIYWCTADVGWVTGHSYIVYGPLANGATAVMFEGVPNYPNVSRFWEVIDKHQVTIFYTAPTAIRALMRDGADPVKKTSRKSLRLLGSVGEPINPEAWRWYYEVVGDSRCPIVDTWWQTETGGILISPLAGAVDLKPGSATLPFFGVQPALVDAEGKILEGATEGNLVLLDSWPGQMRSVYGDHQRFIDTYFRTYPGSYFTGDGCRRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_BARQU (Acetyl-coenzyme A synthetase OS=Bartonella quintana GN=acsA PE=3 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 3.646e-97
Identity = 151/241 (62.66%), Postives = 186/241 (77.18%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY P ++YWCT D GWI+GHSY++YGP+ NGA+ ++FEG PT+PD GR W+IVDK+KV   YTAPT +R+LM  GN +V    R SLR+LG+VGEPINP AW+WF++ VGD+RCPI DTWWQTETGG MITPLPGA   K GSAT PFFGVQ  I+D +G  +EGE  G LCI  SWPG  RTLY DHER+  TYF  + G YFTGDGC RD DGY+W+TGR+DD++N
Sbjct:  281 YLVYVSMTHQYVFDYHPGEIYWCTADIGWISGHSYLIYGPLCNGATTLMFEGIPTFPDQGRFWEIVDKHKVNTLYTAPTAIRALMGAGNSFVEHSKRTSLRLLGTVGEPINPEAWKWFYHTVGDNRCPILDTWWQTETGGHMITPLPGATQLKAGSATHPFFGVQLQIIDGEGNVLEGEAEGNLCIIDSWPGQMRTLYNDHERFIETYFSTYKGKYFTGDGCKRDNDGYYWITGRIDDILN 521          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_NOVAD9.594e-9863.49Acetyl-coenzyme A synthetase OS=Novosphingobium ar... [more]
ACSA_BARHE9.594e-9863.90Acetyl-coenzyme A synthetase OS=Bartonella hensela... [more]
ACSA_BARBK9.594e-9862.66Acetyl-coenzyme A synthetase OS=Bartonella bacilli... [more]
ACSA_HALHL1.253e-9761.83Acetyl-coenzyme A synthetase OS=Halorhodospira hal... [more]
ACSA_METSB1.636e-9763.90Acetyl-coenzyme A synthetase OS=Methylocella silve... [more]
ACSA_BRUMB1.636e-9762.24Acetyl-coenzyme A synthetase OS=Brucella melitensi... [more]
ACSA_LEPIN2.137e-9764.61Acetyl-coenzyme A synthetase OS=Leptospira interro... [more]
ACSA_LEPIC2.137e-9764.61Acetyl-coenzyme A synthetase OS=Leptospira interro... [more]
ACSA_XANAC2.791e-9762.66Acetyl-coenzyme A synthetase OS=Xanthomonas axonop... [more]
ACSA_BARQU3.646e-9762.66Acetyl-coenzyme A synthetase OS=Bartonella quintan... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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