FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHILO (Acetyl-coenzyme A synthetase OS=Rhizobium loti GN=acsA PE=3 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 4.761e-97
Identity = 152/241 (63.07%), Postives = 186/241 (77.18%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + T +Y FDY   D+YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YP   R W+++DK+KV IFYTAPT +R+LM  GN+ V + SRKSLRVLGSVGEPINP AW W+FNVVG+ + PI DTWWQTETGG +ITPLPGA   K GSAT PFFGV+P +VD +G  +EG   G LCI  SWPG  RT+YGDH+R+  TYF  + G YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  282 YLVYASMTHQYVFDYHDGDIYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPSQSRFWEVIDKHKVNIFYTAPTALRALMGAGNDPVKKTSRKSLRVLGSVGEPINPEAWEWYFNVVGNGKVPIVDTWWQTETGGILITPLPGATDLKAGSATRPFFGVKPQLVDGEGKVLEGAADGNLCITDSWPGQMRTVYGDHDRFVQTYFSTYKGKYFTGDGCRRDADGYYWITGRVDDVIN 522          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_RHOCA (Acetyl-coenzyme A synthetase OS=Rhodobacter capsulatus GN=acsA PE=3 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.061e-96
Identity = 155/243 (63.79%), Postives = 190/243 (78.19%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEI-EGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A T +Y FDYK  DV+WCT D GW+TGHSY++YGP+ NGA+ ++FEG PT+PD+GR W + +K+KV  FYTAPT +R+LM  G E+V +Y   SLRVLGSVGEPINP AW W+   VG  +CPI DT+WQTETGG MITPLPGA P KPGSAT PFFGV+PV++D +  V I E EC G LCI  SWPG  RT++GDH+R++ TYF  + GYYFTGDGC RDKDGY+W+TGRVDDVIN
Sbjct:  286 YLVYAAMTHQYTFDYKDGDVFWCTADVGWVTGHSYIIYGPLANGATTLMFEGVPTFPDAGRFWAVCEKHKVNQFYTAPTAIRALMGQGPEWVEKYDLSSLRVLGSVGEPINPEAWVWYDKYVGKGKCPIVDTFWQTETGGHMITPLPGATPTKPGSATNPFFGVKPVVLDPQTAVRIGEVECEGVLCISDSWPGQMRTVWGDHDRFQETYFGQYRGYYFTGDGCRRDKDGYYWITGRVDDVIN 528          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_XANCP (Acetyl-coenzyme A synthetase OS=Xanthomonas campestris pv. campestris GN=acsA PE=3 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.385e-96
Identity = 150/241 (62.24%), Postives = 188/241 (78.01%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  + T +  FD +  D+YWCT D GW+TGHSY++YGP+ NGA+ V+FEG P YP+  R W+++DK++VTIFYTAPT +R+LMR+G   V + SR SLR+LGSVGEPINP AWRW++ VVGDSRCPI DTWWQTETGG +I+PL GA   KPGSAT PFFGVQP +VD +G  +EG   G L +  SWPG  RT+YGDH+R+  TYF+ +PG YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  280 YLLFASYTHEVVFDLREDDIYWCTADVGWVTGHSYIVYGPLANGATAVMFEGVPNYPNVSRFWEVIDKHQVTIFYTAPTAIRALMREGEAPVKKTSRSSLRLLGSVGEPINPEAWRWYYEVVGDSRCPIVDTWWQTETGGILISPLAGAVDLKPGSATLPFFGVQPALVDAEGKILEGATEGNLVLLDSWPGQMRTVYGDHQRFIDTYFRTYPGSYFTGDGCRRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_XANC8 (Acetyl-coenzyme A synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=acsA PE=3 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.385e-96
Identity = 150/241 (62.24%), Postives = 188/241 (78.01%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++  + T +  FD +  D+YWCT D GW+TGHSY++YGP+ NGA+ V+FEG P YP+  R W+++DK++VTIFYTAPT +R+LMR+G   V + SR SLR+LGSVGEPINP AWRW++ VVGDSRCPI DTWWQTETGG +I+PL GA   KPGSAT PFFGVQP +VD +G  +EG   G L +  SWPG  RT+YGDH+R+  TYF+ +PG YFTGDGC RD DGY+W+TGRVDDVIN
Sbjct:  280 YLLFASYTHEVVFDLREDDIYWCTADVGWVTGHSYIVYGPLANGATAVMFEGVPNYPNVSRFWEVIDKHQVTIFYTAPTAIRALMREGEAPVKKTSRSSLRLLGSVGEPINPEAWRWYYEVVGDSRCPIVDTWWQTETGGILISPLAGAVDLKPGSATLPFFGVQPALVDAEGKILEGATEGNLVLLDSWPGQMRTVYGDHQRFIDTYFRTYPGSYFTGDGCRRDADGYYWITGRVDDVIN 520          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_AGRT5 (Acetyl-coenzyme A synthetase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=acsA PE=3 SV=2)

HSP 1 Score: 351.288 bits (900), Expect = 3.086e-96
Identity = 148/241 (61.41%), Postives = 192/241 (79.67%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+T+ T +Y FDYK  +V+WCT D GW+TGHSY++YGP+ N A+ ++FEG P +PD GR W+++DK+KV IFYTAPT +RSLM  G+++V R SR+SLR+LG+VGEPINP AW W+++VVG+ + PI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD +G  +EG   G LCI  SWPG  R++YGDH+R+  TYF  + G YFTGDGC RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYTSMTHEYVFDYKDGEVFWCTADVGWVTGHSYIVYGPLANCATTLMFEGVPNFPDQGRFWEVIDKHKVNIFYTAPTALRSLMGAGDQFVQRSSRESLRLLGTVGEPINPEAWEWYYHVVGEDKSPIVDTWWQTETGGILISPLPGATDLKPGSATRPFFGVQPQLVDAEGNVLEGPADGNLCIIDSWPGQSRSVYGDHQRFVDTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA2_PSEPK (Acetyl-coenzyme A synthetase 2 OS=Pseudomonas putida (strain KT2440) GN=acsA2 PE=3 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 3.086e-96
Identity = 152/241 (63.07%), Postives = 185/241 (76.76%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y++    TFK  FDY+  +V+WCT D GW+TGHSY++YGP+ NGA  ++FEG P YPD+ R W +VDK++V IFYTAPT +R+LMR+G+  +   SRKSLR+LGSVGEPINP AW W+F  VG  RCPI DTWWQTETGG M+TPLPG    KPG AT P FGVQPV++DEKG  IEG  +G L IK+SWPG  R++YGDH+R   TYFKP PGYYFTGDG  RD DG +W+TGR+DDVIN
Sbjct:  277 YLLQATMTFKVVFDYRDGEVFWCTADVGWVTGHSYIVYGPLANGAISLMFEGVPNYPDTSRFWQVVDKHQVNIFYTAPTALRALMREGSAPLQSTSRKSLRLLGSVGEPINPEAWEWYFEEVGQKRCPIVDTWWQTETGGIMLTPLPGTQSLKPGCATQPMFGVQPVLLDEKGKLIEGPGAGVLAIKASWPGQIRSVYGDHQRMVDTYFKPLPGYYFTGDGARRDADGDYWITGRIDDVIN 517          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PHOPR (Acetyl-coenzyme A synthetase OS=Photobacterium profundum GN=acsA PE=3 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.876e-96
Identity = 153/241 (63.49%), Postives = 183/241 (75.93%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+   TFKY FDY+  DVYWCT D GWITGHSY++YGP+ NGA+ V+FEG P YP + R  ++VDK+ V+I YTAPT +R+LM  G E +   SR SLR++GSVGEPINP AW W+ + +GDSRCPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP IVD  G  +EG   G L +  SWPG  RTL+GDHER+E TYF  F G YFTGDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYATMTFKYVFDYQEGDVYWCTADVGWITGHSYLVYGPLANGATTVLFEGVPNYPSTSRMSEVVDKHNVSILYTAPTAIRALMAKGTEAIKGTSRSSLRIMGSVGEPINPEAWEWYHHTIGDSRCPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPAIVDNMGNILEGVAEGNLVMVDSWPGQMRTLWGDHERFEQTYFSTFQGMYFTGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_DROME (Acetyl-coenzyme A synthetase OS=Drosophila melanogaster GN=AcCoAS PE=2 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.876e-96
Identity = 149/241 (61.83%), Postives = 186/241 (77.18%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+++ ATTFK  FDYKP D+YWCT D GWITGH+YV+YGP+ NGA+ V+FEG P +P + R W ++DKYKVT FYTAPT +R+LM+ G   V +++   L+VLGSVGEPINP AW W++  +G  +C I DT+WQTETGG +ITPLPGA P KPGSA+FPFFGV+P ++DE G+EI+GE  GYL     WPG  RTLY +HER+E TYF  FPGYY TGDG  RD DGY W+TGRVDD++N
Sbjct:  302 YLLYAATTFKIVFDYKPGDIYWCTADVGWITGHTYVVYGPLANGATSVIFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRALMKFGEGPVLKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMKPGSASFPFFGVKPTLLDECGIEIKGEGEGYLVFSQPWPGMMRTLYNNHERFEDTYFSKFPGYYCTGDGARRDADGYLWITGRVDDMLN 542          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PSYIN (Acetyl-coenzyme A synthetase OS=Psychromonas ingrahamii (strain 37) GN=acsA PE=3 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.173e-95
Identity = 150/241 (62.24%), Postives = 185/241 (76.76%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY+  D+YWCT D GWITGH+Y +YGP+ NGA+ ++FEG P YP   R  ++VDK+KV+I YTAPT +R+LM  G++ +    R SLR+LGSVGEPINP AW W++N +GD RCPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP IVD +GV +EGE +G L +  SWPG  RTLY +H+R+E TYF  F G YFTGDG  RD DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAAMTFKYVFDYQEGDIYWCTADVGWITGHTYSVYGPLANGATSLIFEGVPNYPTPARMSEVVDKHKVSILYTAPTAIRALMAKGDQAIEGTHRSSLRILGSVGEPINPEAWEWYYNKIGDERCPIVDTWWQTETGGILISPLPGATDLKPGSATRPFFGVQPAIVDSEGVVLEGEAAGNLVMLDSWPGQMRTLYNNHDRFEQTYFSTFKGMYFTGDGARRDSDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_AERHH (Acetyl-coenzyme A synthetase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=acsA PE=3 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.000e-95
Identity = 148/241 (61.41%), Postives = 182/241 (75.52%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+   TFKY FDY   D+YWCT D GW+TGHSY++YGP+ NGA+ ++FEG P YP + R   +VDK++V+I YTAPT +R+LM  GNE V   SR SLR++GSVGEPINP AW W++  +G+ RCPI DTWWQTETGG +I+PLPG    KPGSAT PFFGVQP +VD  G  +EG   G L I  SWPG  RT++GDHER+E TYF  FPG YFTGDG  RD+DGY+W+TGRVDDV+N
Sbjct:  280 YLVYATLTFKYIFDYHEEDIYWCTADVGWVTGHSYLVYGPLANGATTIMFEGVPNYPATNRMSQVVDKHQVSILYTAPTAIRALMAKGNEAVADTSRSSLRIMGSVGEPINPEAWEWYYRTIGEERCPIVDTWWQTETGGILISPLPGVTDLKPGSATRPFFGVQPALVDNMGEPLEGATEGNLVITDSWPGQMRTVFGDHERFEQTYFSTFPGRYFTGDGARRDEDGYYWITGRVDDVLN 520          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_RHILO4.761e-9763.07Acetyl-coenzyme A synthetase OS=Rhizobium loti GN=... [more]
ACSA_RHOCA1.061e-9663.79Acetyl-coenzyme A synthetase OS=Rhodobacter capsul... [more]
ACSA_XANCP1.385e-9662.24Acetyl-coenzyme A synthetase OS=Xanthomonas campes... [more]
ACSA_XANC81.385e-9662.24Acetyl-coenzyme A synthetase OS=Xanthomonas campes... [more]
ACSA_AGRT53.086e-9661.41Acetyl-coenzyme A synthetase OS=Agrobacterium tume... [more]
ACSA2_PSEPK3.086e-9663.07Acetyl-coenzyme A synthetase 2 OS=Pseudomonas puti... [more]
ACSA_PHOPR6.876e-9663.49Acetyl-coenzyme A synthetase OS=Photobacterium pro... [more]
ACSA_DROME6.876e-9661.83Acetyl-coenzyme A synthetase OS=Drosophila melanog... [more]
ACSA_PSYIN1.173e-9562.24Acetyl-coenzyme A synthetase OS=Psychromonas ingra... [more]
ACSA_AERHH2.000e-9561.41Acetyl-coenzyme A synthetase OS=Aeromonas hydrophi... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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