FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_YERPA (Acetyl-coenzyme A synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=acs PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.872e-93
Identity = 149/241 (61.83%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA  ++FEG P YP   R   +VDK+KV I YTAPT +R+LM +G++ +    R SLR++GSVGEPINP AW W++N +G+S+CPI DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD  G   EG   G L I  SWPG  RTL+GDHER+E TYF  F G YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPNYPGVNRLSQVVDKHKVNILYTAPTAIRALMAEGDKAIEGTKRDSLRIMGSVGEPINPEAWEWYYNKIGNSKCPIVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNLGNPQEGVAEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SODGM (Acetyl-coenzyme A synthetase OS=Sodalis glossinidius (strain morsitans) GN=acs PE=3 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.194e-93
Identity = 146/241 (60.58%), Postives = 183/241 (75.93%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ ATTFKY FDY P DVYWCT D GW+TGHSY++YGP+   A  ++FEG P +P + R   +VDK++V I YTAPT +R+LM +G++ +T   R SLR++GSVGEPINP AW W+++ +G+ RCPI DTWWQTETGGFMITPLPGA   KPGSA  PFFGVQP +VD  G  ++G   G L I  SWPG  RTLYGDH+R++ TYF  F G YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAATTFKYVFDYHPGDVYWCTADVGWVTGHSYLLYGPLACCAITLMFEGVPNWPAASRMAQVVDKHQVNILYTAPTAIRALMAEGDKAITGTHRSSLRIMGSVGEPINPEAWEWYYHKIGNGRCPIVDTWWQTETGGFMITPLPGAMALKPGSAALPFFGVQPALVDNVGTPVDGAGEGNLVITDSWPGQARTLYGDHDRFKQTYFYTFKGMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_PHOLL (Acetyl-coenzyme A synthetase OS=Photorhabdus luminescens subsp. laumondii GN=acs PE=3 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.194e-93
Identity = 145/241 (60.17%), Postives = 184/241 (76.35%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ + TFKY FDY+P +VYWCT D GW+TGHSY++YGP+  GA  ++FEG P YP   R   I+DK++V I YTAPT +R+LM +G++ +    R SLR++GSVGEPINP AW W++  +G+S+CPI DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD  G ++EG C G L I  SWPG  R+L+GDH+R+E TYF  F G YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYASLTFKYVFDYQPGEVYWCTADVGWVTGHSYLLYGPLSCGAITLMFEGVPNYPAVNRLSQIIDKHQVNILYTAPTAIRALMAEGDKAIEGTKRTSLRIMGSVGEPINPEAWEWYYQKIGNSKCPIVDTWWQTETGGFMITPLPGATELKAGSATLPFFGVQPALVDNLGEQLEGVCEGNLVITDSWPGQARSLFGDHDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_YERPS (Acetyl-coenzyme A synthetase OS=Yersinia pseudotuberculosis GN=acs PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.171e-93
Identity = 148/241 (61.41%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA  ++FEG P YP   R   +VDK+KV I YTAPT +R+LM +G++ +    R SLR++GSVGEPINP AW W++N +G+S+CPI DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD  G   EG   G L I  SWPG  RTL+GDH+R+E TYF  F G YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPNYPGVNRLSQVVDKHKVNILYTAPTAIRALMAEGDKAIEGTKRDSLRIMGSVGEPINPEAWEWYYNKIGNSKCPIVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNLGNPQEGVAEGNLVITDSWPGQARTLFGDHDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_YERP3 (Acetyl-coenzyme A synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=acs PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.171e-93
Identity = 148/241 (61.41%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA  ++FEG P YP   R   +VDK+KV I YTAPT +R+LM +G++ +    R SLR++GSVGEPINP AW W++N +G+S+CPI DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD  G   EG   G L I  SWPG  RTL+GDH+R+E TYF  F G YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPNYPGVNRLSQVVDKHKVNILYTAPTAIRALMAEGDKAIEGTKRDSLRIMGSVGEPINPEAWEWYYNKIGNSKCPIVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNLGNPQEGVAEGNLVITDSWPGQARTLFGDHDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_YERE8 (Acetyl-coenzyme A synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=acs PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.171e-93
Identity = 147/241 (61.00%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA  ++FEG P YP   R   ++DK++V I YTAPT +R+LM +G++ +    R SLR++GSVGEPINP AW W++N +G+S+CPI DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD  G   EG   G L I  SWPG  RTL+GDHER+E TYF  F G YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPNYPGVNRLGQVIDKHQVNILYTAPTAIRALMAEGDKAIEGTKRTSLRIMGSVGEPINPEAWEWYYNKIGNSKCPIVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNLGNPQEGAAEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHESW (Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain W3-18-1) GN=acsA PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.171e-93
Identity = 146/241 (60.58%), Postives = 183/241 (75.93%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ + T +Y FDYK  +VYWCT D GWITGHSY++YGP+ NGA+V++ EG P +P   R  +++D++KV I YTAPTL+R+LM +G ++  ++   +LR++GSVGEPINP AWRW+  V+G   CPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP +VD  G  +EGE  G L +  SWPG  RT+YGDHER+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  281 YMVYASMTHEYVFDYKAGEVYWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVNILYTAPTLIRALMAEGKQHFDQFDGSTLRIMGSVGEPINPEAWRWYHEVIGHEHCPIVDTWWQTETGGILITPLPGATDTKPGSATRPFFGVQPALVDNMGNILEGENEGNLVLLDSWPGQMRTVYGDHERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVIN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHEPC (Acetyl-coenzyme A synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=acsA PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 4.171e-93
Identity = 146/241 (60.58%), Postives = 183/241 (75.93%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ + T +Y FDYK  +VYWCT D GWITGHSY++YGP+ NGA+V++ EG P +P   R  +++D++KV I YTAPTL+R+LM +G ++  ++   +LR++GSVGEPINP AWRW+  V+G   CPI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP +VD  G  +EGE  G L +  SWPG  RT+YGDHER+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  281 YMVYASMTHEYVFDYKAGEVYWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNHPSPARLGEMIDRHKVNILYTAPTLIRALMAEGKQHFDQFDGSTLRIMGSVGEPINPEAWRWYHEVIGHEHCPIVDTWWQTETGGILITPLPGATDTKPGSATRPFFGVQPALVDNMGNILEGENEGNLVLLDSWPGQMRTVYGDHERFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVIN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_MARAV (Acetyl-coenzyme A synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=acsA PE=3 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 5.448e-93
Identity = 147/241 (61.00%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ + T +Y FDY   DVYWCT D GW+TGHSY++YGP+ NGA  ++FEG P YPDS R   +VDK+KV I YTAPT +R+LM  G   +   +R SL++LGSVGEPINP AW W+  V+G+S+CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD +G  +EG+  G L I  SWPG  RT+YGDHER+  TYF  + G YFTGDG  RD+DGY+W+TGRVDDV+N
Sbjct:  282 YMVYASMTHQYVFDYHDGDVYWCTADFGWVTGHSYILYGPLANGAITLLFEGVPNYPDSSRMGQVVDKHKVNILYTAPTAIRALMAQGESCMDGTTRGSLKLLGSVGEPINPEAWEWYHRVIGNSKCPIVDTWWQTETGGILISPLPGAVDLKPGSATLPFFGVQPALVDNEGNILEGKTEGNLVILDSWPGQMRTIYGDHERFVQTYFSTYKGMYFTGDGARRDEDGYYWITGRVDDVLN 522          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHEHH (Acetyl-coenzyme A synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=acsA PE=3 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 7.115e-93
Identity = 147/241 (61.00%), Postives = 183/241 (75.93%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ A T +Y FDYK ++VYWCT D GWITGHSY++YGP+ NGA+V++ EG P YP   R  ++VD++KV I YTAPTL+R+LM +G E    +   SLR++GSVGEPINP AWRW+ +V+G  +CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD  G  ++G   G L I  SWPG  RT++GDH+R+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  281 YMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNYPSPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFAGFDGSSLRIMGSVGEPINPEAWRWYNDVIGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIVDGASEGNLVILDSWPGQMRTVFGDHDRFVLTYFKTFRGMYFTGDGAKRDEDGYYWITGRVDDVIN 521          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_YERPA1.872e-9361.83Acetyl-coenzyme A synthetase OS=Yersinia pestis bv... [more]
ACSA_SODGM3.194e-9360.58Acetyl-coenzyme A synthetase OS=Sodalis glossinidi... [more]
ACSA_PHOLL3.194e-9360.17Acetyl-coenzyme A synthetase OS=Photorhabdus lumin... [more]
ACSA_YERPS4.171e-9361.41Acetyl-coenzyme A synthetase OS=Yersinia pseudotub... [more]
ACSA_YERP34.171e-9361.41Acetyl-coenzyme A synthetase OS=Yersinia pseudotub... [more]
ACSA_YERE84.171e-9361.00Acetyl-coenzyme A synthetase OS=Yersinia enterocol... [more]
ACSA_SHESW4.171e-9360.58Acetyl-coenzyme A synthetase OS=Shewanella sp. (st... [more]
ACSA_SHEPC4.171e-9360.58Acetyl-coenzyme A synthetase OS=Shewanella putrefa... [more]
ACSA_MARAV5.448e-9361.00Acetyl-coenzyme A synthetase OS=Marinobacter aquae... [more]
ACSA_SHEHH7.115e-9361.00Acetyl-coenzyme A synthetase OS=Shewanella halifax... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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