FC930205

Overview
NameFC930205
Unique NameFC930205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_CITK8 (Acetyl-coenzyme A synthetase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=acs PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 9.293e-93
Identity = 146/241 (60.58%), Postives = 182/241 (75.52%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ ATTFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA+ ++FEG P +P   R   +VDK++VTI YTAPT +R+LM +G++ +    R SLR+LGSVGEPINP AW W++  +G+ +CP+ DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD +G   EG   G L I  SWPG  RTL+GDHER+E TYF  F   YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAATTFKYVFDYHPDDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVTILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SERP5 (Acetyl-coenzyme A synthetase OS=Serratia proteamaculans (strain 568) GN=acs PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.214e-92
Identity = 146/241 (60.58%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY   DVYWCT D GW+TGHSY++YGP+  GA  ++FEG P YP   R   ++DK++V I YTAPT +R+LM +G++ +    R SLR++GSVGEPINP AW W++N +G+++CPI DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD  G   EG C G L I  SWPG  RTL+GDH+R+E TYF  F G YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAAMTFKYVFDYHDGDVYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPNYPGVNRLSQVIDKHQVNILYTAPTAIRALMAEGDKAIEGTKRDSLRIMGSVGEPINPEAWEWYYNKIGNAKCPIVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNIGTVQEGACEGNLVITDSWPGQARTLFGDHDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHESH (Acetyl-coenzyme A synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=acsA PE=3 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.585e-92
Identity = 148/241 (61.41%), Postives = 180/241 (74.69%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ A T +Y FDYK  +VYWCT D GWITGHSY++YGP+ NGA+V++ EG P YP   R  ++VD++KV I YTAPTL+R+LM +G E    +   SLR++GSVGEPINP AWRW+  V+G   CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD  G  I+G   G L I  SWPG  RT++GDH+R+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  281 YMVYAAMTHEYVFDYKDGEVYWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFADFDGSSLRIMGSVGEPINPEAWRWYNEVIGHEHCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIIDGATEGNLVILDSWPGQMRTVFGDHDRFALTYFKTFRGMYFTGDGAKRDEDGYYWITGRVDDVIN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHEPA (Acetyl-coenzyme A synthetase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=acsA PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.070e-92
Identity = 148/241 (61.41%), Postives = 183/241 (75.93%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            YMV+ A T +Y FDYK ++VYWCT D GWITGHSY++YGP+ NGA+V++ EG P YP   R  ++VD++KV I YTAPTL+R+LM +G E    +   SLR++GSVGEPINP AWRW+ +V+G  +CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGVQP +VD  G  +EG   G L I  SWPG  RT++GDH+R+  TYFK F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  281 YMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFEGFDGSSLRIMGSVGEPINPEAWRWYNDVIGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNIGNIVEGANEGNLVILDSWPGQMRTVFGDHDRFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVIN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_SHEDO (Acetyl-coenzyme A synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=acsA PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.070e-92
Identity = 148/241 (61.41%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A T +Y FDYK ++VYWCT D GWITGHSY++YGP  NGA+V++ EG P YP   R  +IVD++KV I YTAPTL+R+LM +G E+   +S +SLR++GSVGEPINP AWRW+  V+G   CPI DTWWQTETGG +I+PLPGA   KPGSAT PFFGV+P IVD  G  +EG   G L +  SWPG  RT+YGDH R+  TYF  F G YFTGDG  RD+DGY+W+TGRVDDVIN
Sbjct:  283 YLVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGPFANGATVLMHEGVPNYPTPARLGEIVDRHKVNILYTAPTLIRALMAEGKEHFNGFSGESLRIMGSVGEPINPEAWRWYHEVIGHEHCPIVDTWWQTETGGILISPLPGAIATKPGSATRPFFGVKPAIVDSTGQILEGAVEGNLVMLDSWPGQMRTVYGDHARFALTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVIN 523          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_ENTS8 (Acetyl-coenzyme A synthetase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=acs PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.704e-92
Identity = 145/241 (60.17%), Postives = 182/241 (75.52%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ ATTF YAFDY P D+YWCT D GW+TGHSY++YGP+  GA+ ++FEG P +P + R   +VDK+KV I YTAPT +R+LM +G++ +    R SLR+LGSVGEPINP AW W++  +G+ +CP+ DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD +G   +G   G L I  SWPG  RTL+GDHER+E TYF  F   YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAATTFLYAFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPSANRMAQVVDKHKVNILYTAPTAIRALMAEGDKAIDGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVIDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPQQGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_VIBVY (Acetyl-coenzyme A synthetase OS=Vibrio vulnificus (strain YJ016) GN=acsA PE=3 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 4.612e-92
Identity = 145/242 (59.92%), Postives = 182/242 (75.21%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS-GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+   TFKY FDY+P + +WCT D GWITGH+Y++YGP+ NGA  ++FEG P YP++ R  ++VDK++V I YTAPT +R+LM  GNE +    R SLR++GSVGEPINP AW W++  +G+ + PI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP +VD  G  IE + + G L I  SWPG  RT+YGDHER+E TYF  F G YFTGDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYATMTFKYVFDYQPGETFWCTADVGWITGHTYLVYGPLANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAIEGTDRSSLRIMGSVGEPINPEAWEWYYKTIGNEKSPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPALVDNMGNVIEDQAAEGNLVILDSWPGQMRTVYGDHERFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLN 522          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_VIBVU (Acetyl-coenzyme A synthetase OS=Vibrio vulnificus GN=acsA PE=3 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 4.612e-92
Identity = 145/242 (59.92%), Postives = 182/242 (75.21%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS-GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+   TFKY FDY+P + +WCT D GWITGH+Y++YGP+ NGA  ++FEG P YP++ R  ++VDK++V I YTAPT +R+LM  GNE +    R SLR++GSVGEPINP AW W++  +G+ + PI DTWWQTETGG +ITPLPGA   KPGSAT PFFGVQP +VD  G  IE + + G L I  SWPG  RT+YGDHER+E TYF  F G YFTGDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYATMTFKYVFDYQPGETFWCTADVGWITGHTYLVYGPLANGAKTILFEGVPNYPNTSRMSEVVDKHQVNILYTAPTAIRALMAKGNEAIEGTDRSSLRIMGSVGEPINPEAWEWYYKTIGNEKSPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPALVDNMGNVIEDQAAEGNLVILDSWPGQMRTVYGDHERFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLN 522          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_ECOLI (Acetyl-coenzyme A synthetase OS=Escherichia coli (strain K12) GN=acs PE=1 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 4.612e-92
Identity = 144/241 (59.75%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA+ ++FEG P +P   R   +VDK++V I YTAPT +R+LM +G++ +    R SLR+LGSVGEPINP AW W++  +G+ +CP+ DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD +G  +EG   G L I  SWPG  RTL+GDHER+E TYF  F   YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLN 521          
BLAST of FC930205 vs. ExPASy Swiss-Prot
Match: ACSA_ECOL6 (Acetyl-coenzyme A synthetase OS=Escherichia coli O6 GN=acs PE=3 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 4.612e-92
Identity = 144/241 (59.75%), Postives = 181/241 (75.10%), Query Frame = 3
Query:    3 YMVHTATTFKYAFDYKPSDVYWCTTDCGWITGHSYVMYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCSRDKDGYHWLTGRVDDVIN 725
            Y+V+ A TFKY FDY P D+YWCT D GW+TGHSY++YGP+  GA+ ++FEG P +P   R   +VDK++V I YTAPT +R+LM +G++ +    R SLR+LGSVGEPINP AW W++  +G+ +CP+ DTWWQTETGGFMITPLPGA   K GSAT PFFGVQP +VD +G  +EG   G L I  SWPG  RTL+GDHER+E TYF  F   YF+GDG  RD+DGY+W+TGRVDDV+N
Sbjct:  281 YLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLN 521          
The following BLAST results are available for this feature:
BLAST of FC930205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ACSA_CITK89.293e-9360.58Acetyl-coenzyme A synthetase OS=Citrobacter koseri... [more]
ACSA_SERP51.214e-9260.58Acetyl-coenzyme A synthetase OS=Serratia proteamac... [more]
ACSA_SHESH1.585e-9261.41Acetyl-coenzyme A synthetase OS=Shewanella sedimin... [more]
ACSA_SHEPA2.070e-9261.41Acetyl-coenzyme A synthetase OS=Shewanella pealean... [more]
ACSA_SHEDO2.070e-9261.41Acetyl-coenzyme A synthetase OS=Shewanella denitri... [more]
ACSA_ENTS82.704e-9260.17Acetyl-coenzyme A synthetase OS=Enterobacter sakaz... [more]
ACSA_VIBVY4.612e-9259.92Acetyl-coenzyme A synthetase OS=Vibrio vulnificus ... [more]
ACSA_VIBVU4.612e-9259.92Acetyl-coenzyme A synthetase OS=Vibrio vulnificus ... [more]
ACSA_ECOLI4.612e-9259.75Acetyl-coenzyme A synthetase OS=Escherichia coli (... [more]
ACSA_ECOL64.612e-9259.75Acetyl-coenzyme A synthetase OS=Escherichia coli O... [more]

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Properties
Property NameValue
Genbank descriptionC34004H06EF PostHarvC1 Citrus clementina cDNA clone C34004H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930205 ID=FC930205; Name=FC930205; organism=Citrus clementina; type=EST; length=726bp
GATATATGGTGCACACAGCAACAACGTTCAAGTATGCATTTGACTACAAG
CCCTCTGATGTCTATTGGTGTACAACTGACTGTGGTTGGATTACGGGGCA
CAGTTATGTCATGTATGGACCCATGCTCAATGGAGCTTCTGTAGTTGTTT
TTGAAGGGGCTCCAACTTATCCTGATTCTGGTCGCAGTTGGGACATTGTT
GACAAATACAAGGTGACAATATTCTATACTGCACCGACCTTGGTGCGTTC
TCTCATGCGTGATGGCAATGAGTATGTTACCCGCTACTCCCGCAAATCCT
TACGGGTCTTGGGAAGTGTAGGCGAGCCTATAAATCCAAGTGCATGGAGG
TGGTTTTTCAATGTAGTTGGAGATTCAAGGTGTCCTATCTCCGACACTTG
GTGGCAAACTGAAACTGGTGGCTTCATGATTACTCCGTTACCAGGTGCCT
GGCCGCAGAAGCCTGGTTCTGCTACGTTTCCTTTCTTTGGGGTTCAGCCT
GTCATAGTAGATGAGAAGGGTGTTGAAATTGAAGGCGAGTGCAGTGGGTA
TCTTTGCATAAAAAGCTCATGGCCTGGTGCATTTCGGACTCTTTATGGTG
ATCATGAAAGATACGAAACCACTTACTTTAAGCCATTCCCAGGATATTAT
TTCACTGGTGATGGCTGCAGCAGGGACAAGGATGGATACCACTGGCTCAC
CGGACGAGTTGATGATGTCATCAACG
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