FC930211

Overview
NameFC930211
Unique NameFC930211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.146e-91
Identity = 176/226 (77.88%), Postives = 187/226 (82.74%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSS-TAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDN----NLLGKFELSGIPPAPRG 664
            KKDI     ALRRLRTACERAKRTLSS TAQTTIEIDSLYEG+DFYTTITRARFEELNMDLF+KCM+PVEKCLRD+K+DK+ VH+VVLVGGSTRIPKVQQLL+DFFNGKELCKSINPDE           ILSGEGNE+  D             ETAGGVMTVLIPRNTTIPTKKEQ+FSTYSDNQPGVLIQVYEGER RTRDN     LLGKFEL+GIPPAPRG
Sbjct:  254 KKDIRWECEALRRLRTACERAKRTLSSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFKKCMDPVEKCLRDSKIDKAQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNER-SDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTRDNKLLGKLLGKFELTGIPPAPRG 478
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 320.087 bits (819), Expect = 6.507e-87
Identity = 163/221 (73.76%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAKMDK+ VHD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 8.498e-87
Identity = 162/221 (73.30%), Postives = 180/221 (81.45%), Query Frame = 2 
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470
The following BLAST results are available for this feature:
BLAST of FC930211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_DAUCA1.146e-9177.88Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP70_ONCMY6.507e-8773.76Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP7C_SAGOE8.498e-8773.30Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT8.498e-8773.30Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB8.498e-8773.30Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE8.498e-8773.30Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN8.498e-8773.30Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE8.498e-8773.30Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR8.498e-8773.30Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN8.498e-8773.30Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionC34005A01EF PostHarvC1 Citrus clementina cDNA clone C34005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930211 ID=FC930211; Name=FC930211; organism=Citrus clementina; type=EST; length=665bp
CAAGAAGGATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTG
CCTGTGAAAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATT
GAGATTGATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAG
GGCTAGATTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGC
CAGTGGAGAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCAT
GATGTGGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACT
GTTGCGGGACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTG
ATGAAGCGGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGT
GAGGGTAATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCT
ATCGCTGGGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAA
GGAACACCACTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTCT
GACAACCAGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAG
AACCCGTGACAACAACTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTC
CTGCTCCAAGAGGGG
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