FC930211

Overview
NameFC930211
Unique NameFC930211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 1.110e-86
Identity = 162/221 (73.30%), Postives = 178/221 (80.54%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI GN RA+RRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFYT+ITRARFEEL  DLFR C++PVEK L+D+K+DK S+H++VLVGGSTRIPKVQQLL++FFNGKEL KSINPDE           ILS EG  KV D             ETAGGVMT LIPRNTTIP KK Q FSTYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRG
Sbjct:  248 KKDIMGNQRAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRGCLDPVEKVLKDSKLDKKSIHEIVLVGGSTRIPKVQQLLQEFFNGKELNKSINPDEAVAYGAAVQAAILSNEGGAKVADLLLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.450e-86
Identity = 161/221 (72.85%), Postives = 180/221 (81.45%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFEELN DLFR  ++PVEK LRDAKMDK+ +HD+VLVGGSTRIPK+Q+LL+D+FNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.473e-86
Identity = 161/221 (72.85%), Postives = 180/221 (81.45%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEGIDFYT+ITRARFE+LN DLFR  ++PVEK LRDAK+DKS +HD+VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEKLNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 5.508e-86
Identity = 161/221 (72.85%), Postives = 179/221 (81.00%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD++ N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEELN DLFR  MEPVEK LRDAKMDKS +HD+VLVGGSTRIPKVQ+LL+DFFNGKEL KSINPDE           IL G+ +E+VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQV+EGER  T+DNNLLGKFEL+GIPPAPRG
Sbjct:  250 KKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRG 470          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.603e-85
Identity = 157/221 (71.04%), Postives = 180/221 (81.45%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S NPRALRRLRTACERAKRTLSS AQTTIEIDSL+EG+DFYT++TRARFEEL  DLFR  +EPVEK LRDAK+DK++VH++VLVGGSTRIP++ +L+ DFFNGKE  KSINPDE           IL+G+ +EK QD             ETAGGVMT LI RNTT+PTKK ++FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRG
Sbjct:  248 KKDLSSNPRALRRLRTACERAKRTLSSAAQTTIEIDSLFEGVDFYTSLTRARFEELCQDLFRSTLEPVEKVLRDAKIDKAAVHEIVLVGGSTRIPRIVKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSEKTQDLLLLDVSPLSLGIETAGGVMTPLIKRNTTVPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELAGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 315.079 bits (806), Expect = 2.093e-85
Identity = 160/221 (72.40%), Postives = 179/221 (81.00%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI GN RALRRLRTACERAK TLSS+AQT++EIDSLYEGIDFYT+ITRARFEEL  DLFR  ++PVEK L+DAK+DKS V+++VLVGGSTRIPKVQ+L+ DFFNGKE  KSINPDE           IL+G+ + K QD             ETAGGVMT LIPRNTTIPTKK ++FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRG
Sbjct:  248 KKDICGNQRALRRLRTACERAKTTLSSSAQTSLEIDSLYEGIDFYTSITRARFEELCQDLFRSTLDPVEKVLKDAKLDKSQVNEIVLVGGSTRIPKVQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.093e-85
Identity = 161/221 (72.85%), Postives = 177/221 (80.09%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD++ NPRALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFYT ITRARFEEL  DLFR  M+PVEK LRDAKMDK+ VHD+VLVGGSTRIPKVQ+LL DFF+GKEL KSINPDE           ILSG+ +E VQD             ETAGGVMT LI RNTTIPTK  + F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRG
Sbjct:  249 KKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRG 469          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 2.734e-85
Identity = 162/221 (73.30%), Postives = 176/221 (79.64%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD++ NPRALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFYT ITRARFEEL  DLFR  M+PVEK LRDAKMDKS VHD+VLVGGSTRIPKVQ+LL D F+GKEL KSINPDE           ILSG+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRG
Sbjct:  251 KKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRG 471          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 313.923 bits (803), Expect = 4.663e-85
Identity = 158/221 (71.49%), Postives = 182/221 (82.35%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI+GN RA+RRLRTACERAKRTLSS+AQ +IEIDSL+EGIDFYT+ITRARFEEL  DLFRK MEPVE+ LRD+K+DK+SV+++VLVGGSTRIP+VQ+L+ DFFNGKE CKSINPDE           +L+G+ +EK QD             ETAGGVMT LI RNTTIPTKK ++FSTYSDNQPGVLIQV+EGER RT+D NLLGKFELSGIPPAPRG
Sbjct:  248 KKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 313.923 bits (803), Expect = 4.663e-85
Identity = 160/221 (72.40%), Postives = 180/221 (81.45%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI+GN RA+RRLRTACERAKRTLSS+AQ +IEIDSLYEGIDFYT+ITRARFEEL  DLFR  MEPVEK LRD+K+DKSSV+++VLVGGSTRIP++Q+L+ DFFNGKE CKSINPDE           IL G+ +EK QD             ETAGGVMT LI RNTTIPTKK +VFSTY+DNQPGVLIQV+EGER RT+D NLLGKFELSGIPPAPRG
Sbjct:  248 KKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRG 468          
The following BLAST results are available for this feature:
BLAST of FC930211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS7C1_DICDI1.110e-8673.30Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP7C_DANRE1.450e-8672.85Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP7C_CHICK2.473e-8672.85Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP7D_MANSE5.508e-8672.85Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP71_PUCGR1.603e-8571.04Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP72_PICAN2.093e-8572.40Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP70_BRUMA2.093e-8572.85Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP7A_CAEEL2.734e-8573.30Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP72_SCHPO4.663e-8571.49Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_SCHPO4.663e-8572.40Probable heat shock protein ssa1 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionC34005A01EF PostHarvC1 Citrus clementina cDNA clone C34005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930211 ID=FC930211; Name=FC930211; organism=Citrus clementina; type=EST; length=665bp
CAAGAAGGATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTG
CCTGTGAAAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATT
GAGATTGATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAG
GGCTAGATTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGC
CAGTGGAGAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCAT
GATGTGGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACT
GTTGCGGGACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTG
ATGAAGCGGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGT
GAGGGTAATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCT
ATCGCTGGGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAA
GGAACACCACTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTCT
GACAACCAGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAG
AACCCGTGACAACAACTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTC
CTGCTCCAAGAGGGG
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