FC930211

Overview
NameFC930211
Unique NameFC930211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALTY (Chaperone protein dnaK OS=Salmonella typhimurium GN=dnaK PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALTI (Chaperone protein dnaK OS=Salmonella typhi GN=dnaK PE=2 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALSV (Chaperone protein dnaK OS=Salmonella schwarzengrund (strain CVM19633) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALPK (Chaperone protein dnaK OS=Salmonella paratyphi A (strain AKU_12601) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALPC (Chaperone protein dnaK OS=Salmonella paratyphi C (strain RKS4594) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALPB (Chaperone protein dnaK OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALPA (Chaperone protein dnaK OS=Salmonella paratyphi A GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALNS (Chaperone protein dnaK OS=Salmonella newport (strain SL254) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALHS (Chaperone protein dnaK OS=Salmonella heidelberg (strain SL476) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
[Close]
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: DNAK_SALG2 (Chaperone protein dnaK OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=dnaK PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 96/223 (43.05%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:    8 DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGID----FYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            D+  +P A++RL+ A E+AK  LSS  QT + +  +             +TRA+ E L  DL  + +EP++  L+DA +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D             ET GGVMT LI +NTTIPTK  QVFST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG
Sbjct:  251 DLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRG 468
The following BLAST results are available for this feature:
BLAST of FC930211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SALTY2.679e-4043.05Chaperone protein dnaK OS=Salmonella typhimurium G... [more]
DNAK_SALTI2.679e-4043.05Chaperone protein dnaK OS=Salmonella typhi GN=dnaK... [more]
DNAK_SALSV2.679e-4043.05Chaperone protein dnaK OS=Salmonella schwarzengrun... [more]
DNAK_SALPK2.679e-4043.05Chaperone protein dnaK OS=Salmonella paratyphi A (... [more]
DNAK_SALPC2.679e-4043.05Chaperone protein dnaK OS=Salmonella paratyphi C (... [more]
DNAK_SALPB2.679e-4043.05Chaperone protein dnaK OS=Salmonella paratyphi B (... [more]
DNAK_SALPA2.679e-4043.05Chaperone protein dnaK OS=Salmonella paratyphi A G... [more]
DNAK_SALNS2.679e-4043.05Chaperone protein dnaK OS=Salmonella newport (stra... [more]
DNAK_SALHS2.679e-4043.05Chaperone protein dnaK OS=Salmonella heidelberg (s... [more]
DNAK_SALG22.679e-4043.05Chaperone protein dnaK OS=Salmonella gallinarum (s... [more]

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Properties
Property NameValue
Genbank descriptionC34005A01EF PostHarvC1 Citrus clementina cDNA clone C34005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930211 ID=FC930211; Name=FC930211; organism=Citrus clementina; type=EST; length=665bp
CAAGAAGGATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTG
CCTGTGAAAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATT
GAGATTGATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAG
GGCTAGATTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGC
CAGTGGAGAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCAT
GATGTGGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACT
GTTGCGGGACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTG
ATGAAGCGGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGT
GAGGGTAATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCT
ATCGCTGGGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAA
GGAACACCACTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTCT
GACAACCAGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAG
AACCCGTGACAACAACTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTC
CTGCTCCAAGAGGGG
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