FC930211

Overview
NameFC930211
Unique NameFC930211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.365e-83
Identity = 155/221 (70.14%), Postives = 177/221 (80.09%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD S N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LL+DFFNG++L KSINPDE           IL G+ +E VQD             ETAGGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRG
Sbjct:  250 KKDYSQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRG 470          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 306.99 bits (785), Expect = 5.700e-83
Identity = 155/221 (70.14%), Postives = 179/221 (81.00%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFYT+ITRARFEEL  DLFR  ++PVEK LRDAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           IL+G+ + K QD             ETAGGVMT LIPRN+TIPTKK +VFSTY+DNQPGVLIQV+EGER +T+DNNLLGKFELSGIPPAPRG
Sbjct:  247 KKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRG 467          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 306.605 bits (784), Expect = 7.445e-83
Identity = 154/221 (69.68%), Postives = 179/221 (81.00%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS+AQT++EIDSL+EGIDFYT+ITRARFEEL  DLFR  ++PVEK LRDAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           IL+G+ + K QD             ETAGGVMT LIPRN+TIPTKK ++FSTY+DNQPGVLIQV+EGER +T+DNNLLGKFELSGIPPAPRG
Sbjct:  247 KKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRG 467          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.445e-83
Identity = 156/221 (70.59%), Postives = 179/221 (81.00%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD++ N R+LRRLRTACERAKRTLSS  QTT+EIDSL +GID+Y +ITRA+FEEL MDLFR   EPVEK LRD+K+ KS +HDVVLVGGSTRIPKVQQLL D+FNGKELCK+INPDE           IL+G+ +EK+ D             ETAGGVMTVLI RNTTIPTKK QVFSTY+DNQPGVLIQV+EGER+RT+DNN+LGKFEL+GIPPAPRG
Sbjct:  257 KKDVTSNARSLRRLRTACERAKRTLSSGTQTTVEIDSLIDGIDYYASITRAKFEELCMDLFRGTSEPVEKVLRDSKISKSEIHDVVLVGGSTRIPKVQQLLIDYFNGKELCKNINPDEAVAYGAAVQAAILAGDTSEKM-DLLLLDVSPLSLGLETAGGVMTVLIKRNTTIPTKKTQVFSTYADNQPGVLIQVFEGERSRTKDNNILGKFELTGIPPAPRG 476          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 9.723e-83
Identity = 154/221 (69.68%), Postives = 175/221 (79.19%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            +KD+S N RALRRLRTACERAKRTLSS+ Q T+EIDSL+EG+DFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HDVVLVGGSTRIP+VQ+LL+DFFNGKEL KSINPDE           +L G+  EKV+D             ETAGGVMT LI RN TIPTK+ Q F+TYSDNQPGV IQVYEGER  T+DNNLLG+FELSGIPPAPRG
Sbjct:  252 RKDLSWNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPRVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVRDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRG 472          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 305.834 bits (782), Expect = 1.270e-82
Identity = 156/221 (70.59%), Postives = 177/221 (80.09%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDIS N RALRRLRTACERAKRTLSS+AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  +EPV+K L DAK+DKS V ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           ILSG+ + K QD             ETAGG+MT LIPRN+TIPTKK + FSTY+DNQPGVLIQV+EGER +T+DNNLLGKFELSGIPPAPRG
Sbjct:  248 KKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARFEELCADLFRSTLEPVDKVLSDAKIDKSKVDEIVLVGGSTRIPKVQKLVSDYFNGKEPNRSINPDEAVAYGAAVQAAILSGDTSSKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAQTKDNNLLGKFELSGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.270e-82
Identity = 154/221 (69.68%), Postives = 179/221 (81.00%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +H++VLVGGSTRIPK+Q+LL+DFFNG+EL KSINPDE           IL G+ +E +QD             ETAGGVMTVLI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DN+LLGKFELSGIPPAPRG
Sbjct:  252 KKDITKNKRAVRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGPLEPVEKALRDAKLDKAQIHEIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENLQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNSLLGKFELSGIPPAPRG 472          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.166e-82
Identity = 157/222 (70.72%), Postives = 177/222 (79.73%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEG+DFYT+ITRARFEEL  DLFR  MEPVE+ LRDAK+DKSSVH++VLVGGSTRIPK+Q+++ DFFNGKE  KSINPDE           ILSG+ + K   +             ETAGGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRG
Sbjct:  248 KKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGVDFYTSITRARFEELCQDLFRSTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKMVSDFFNGKEPNKSINPDEGVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRG 469          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.302e-82
Identity = 155/220 (70.45%), Postives = 174/220 (79.09%), Query Frame = 2
Query:    5 KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KD++ N RA+RRLRTACERAKRTLSS+AQ  IEIDSL EGIDFYT+ITRARFEEL  DLFR  ++PVEK LRDAK+DK +VH++VLVGGSTRIPKVQ+LL+DFFNG+EL KSINPDE           IL+G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQVYEGER   RDNNLLGKFELSGIPP PRG
Sbjct:  253 KDLTTNKRAVRRLRTACERAKRTLSSSAQANIEIDSLLEGIDFYTSITRARFEELCSDLFRSTLDPVEKALRDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMKRDNNLLGKFELSGIPPGPRG 472          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 8.231e-82
Identity = 156/222 (70.27%), Postives = 176/222 (79.28%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  M+PVE+ LRDAK+DKSSVH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +             ETAGGVMT LI RNTTIPTKK + FST++DNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRG
Sbjct:  248 KKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRG 469          
The following BLAST results are available for this feature:
BLAST of FC930211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71A_PIG4.365e-8370.14Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HSP72_YEAST5.700e-8370.14Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST7.445e-8369.68Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP70_PYRSA7.445e-8370.59Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP76_SAGOE9.723e-8369.68Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP72_CANAL1.270e-8270.59Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_PLEWA1.270e-8269.68Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_TRIRU2.166e-8270.72Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_ECHGR6.302e-8270.45Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP72_PARBA8.231e-8270.27Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]

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Properties
Property NameValue
Genbank descriptionC34005A01EF PostHarvC1 Citrus clementina cDNA clone C34005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930211 ID=FC930211; Name=FC930211; organism=Citrus clementina; type=EST; length=665bp
CAAGAAGGATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTG
CCTGTGAAAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATT
GAGATTGATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAG
GGCTAGATTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGC
CAGTGGAGAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCAT
GATGTGGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACT
GTTGCGGGACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTG
ATGAAGCGGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGT
GAGGGTAATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCT
ATCGCTGGGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAA
GGAACACCACTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTCT
GACAACCAGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAG
AACCCGTGACAACAACTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTC
CTGCTCCAAGAGGGG
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