FC930211

Overview
NameFC930211
Unique NameFC930211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.834e-81
Identity = 152/219 (69.41%), Postives = 175/219 (79.91%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 658
            KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK LRDAK+DK+ +HD+VLVGGSTRIPKVQ+LL+DFFNG++L KSINPDE           IL G+ +E VQD             ET GGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+FELSGIPPAP
Sbjct:  248 KKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETPGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAP 466          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.395e-81
Identity = 152/221 (68.78%), Postives = 174/221 (78.73%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRG
Sbjct:  253 KKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRVTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 2.395e-81
Identity = 152/221 (68.78%), Postives = 174/221 (78.73%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRG
Sbjct:  253 KKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.128e-81
Identity = 152/221 (68.78%), Postives = 173/221 (78.28%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRG
Sbjct:  253 KKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.128e-81
Identity = 152/221 (68.78%), Postives = 173/221 (78.28%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRG
Sbjct:  253 KKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.128e-81
Identity = 152/221 (68.78%), Postives = 173/221 (78.28%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRG
Sbjct:  253 KKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 5.335e-81
Identity = 152/221 (68.78%), Postives = 177/221 (80.09%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD++ N R+LRRLRTA ERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK L D+K+DKS + ++VLVGGSTRIPKVQ+L+ DFFNGKE  +SINPDE           IL+G+ +   QD             ETAGG+MT LIPRN+TIPTKK +VFSTY+DNQPGVLIQV+EGERTRT+DNNLLGKFELSGIPPAPRG
Sbjct:  248 KKDLTTNQRSLRRLRTAAERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCADLFRSTLEPVEKVLADSKLDKSQIDEIVLVGGSTRIPKVQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSSTTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 5.335e-81
Identity = 153/222 (68.92%), Postives = 178/222 (80.18%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  ++PV++ L DAK+DKS VH++VLVGGSTRIP++Q+L+ D+FNGKE  KSINPDE           ILSG+ + K   +             ETAGG+MT LIPRNTTIPTKK +VFST+SDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRG
Sbjct:  248 KKDLSTNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRSTLQPVDRVLTDAKIDKSQVHEIVLVGGSTRIPRIQKLISDYFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTSEILLLDVAPLSLGIETAGGMMTKLIPRNTTIPTKKSEVFSTFSDNQPGVLIQVYEGERQRTKDNNLLGKFELTGIPPAPRG 469          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 9.101e-81
Identity = 150/221 (67.87%), Postives = 174/221 (78.73%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            K+D +GN RA+RRLRTACERA+RTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LL+DFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRG
Sbjct:  253 KRDNAGNKRAVRRLRTACERARRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 9.101e-81
Identity = 155/222 (69.82%), Postives = 174/222 (78.38%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            +KD++ N RALRRLRTACERAKRTLSS+AQ  IEIDSL++GIDF +TITRARFE++  D FRK MEPVEK LRD+K+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE CKSINPDE           ILSG + +EK+QD             ETAGGVMT LI RNTT+PTKK Q FSTY+DNQPGVLIQV+EGER+ TRDNNLLGKF L GIPP PRG
Sbjct:  252 RKDMTQNQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARFEDMCGDYFRKTMEPVEKVLRDSKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPCKSINPDEAVAFGATVQAAILSGNDSSEKLQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTVPTKKSQTFSTYADNQPGVLIQVFEGERSMTRDNNLLGKFSLDGIPPMPRG 473          
The following BLAST results are available for this feature:
BLAST of FC930211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_CERAE1.834e-8169.41Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP72_CAPHI2.395e-8168.78Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN2.395e-8168.78Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP72_RAT3.128e-8168.78Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE3.128e-8168.78Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN3.128e-8168.78Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP74_YEAST5.335e-8168.78Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP70_NEUCR5.335e-8168.92Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_CHICK9.101e-8167.87Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP70_ACHKL9.101e-8169.82Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]

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Properties
Property NameValue
Genbank descriptionC34005A01EF PostHarvC1 Citrus clementina cDNA clone C34005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930211 ID=FC930211; Name=FC930211; organism=Citrus clementina; type=EST; length=665bp
CAAGAAGGATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTG
CCTGTGAAAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATT
GAGATTGATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAG
GGCTAGATTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGC
CAGTGGAGAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCAT
GATGTGGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACT
GTTGCGGGACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTG
ATGAAGCGGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGT
GAGGGTAATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCT
ATCGCTGGGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAA
GGAACACCACTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTCT
GACAACCAGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAG
AACCCGTGACAACAACTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTC
CTGCTCCAAGAGGGG
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