FC930211

Overview
NameFC930211
Unique NameFC930211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.606e-77
Identity = 146/219 (66.67%), Postives = 167/219 (76.26%), Query Frame = 2
Query:    5 KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPR 661
            KD+S N RALRRLRT CERAKRTLSS+ Q TIEIDSL+EGID+  T++RARFEEL +D FR  + PVEK L+DA MDK SVH+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG+ +  VQD             ETAGGVMT LI RNTTIP KK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR
Sbjct:  264 KDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFEELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSINPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPR 482          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 4.674e-77
Identity = 146/221 (66.06%), Postives = 171/221 (77.38%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+YT I+RARFEEL  DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LL++FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K+ Q+FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRG
Sbjct:  249 KKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTQIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRG 469          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.360e-76
Identity = 145/221 (65.61%), Postives = 171/221 (77.38%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+YT I+RARFEEL  DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LL++FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K+ ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRG
Sbjct:  249 KKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRG 469          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.360e-76
Identity = 145/221 (65.61%), Postives = 171/221 (77.38%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+YT I+RARFEEL  DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LL++FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K+ ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRG
Sbjct:  249 KKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRG 469          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.030e-76
Identity = 150/220 (68.18%), Postives = 169/220 (76.82%), Query Frame = 2
Query:    5 KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KD+S N RALRRLRTACERAKRTLSS AQ TIEID+L+E IDF  TITRARFEEL  DLFR  ++PVE+ L+DAKMDK +VHDVVLVGGSTRIPKV QL+ DFF GKEL KSINPDE  X        IL+G  +++ +              ETAGGVMT LI RNTTIPTKK Q+FSTYSDNQPGV IQV+EGERT T+D +LLG F+LSGIPPAPRG
Sbjct:  254 KDLSSNLRALRRLRTACERAKRTLSSAAQATIEIDALFENIDFQATITRARFEELCGDLFRGTLQPVERVLQDAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFGGKELNKSINPDEAVXYGAAVQAFILTGGKSKQTEGLLLLDVAPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYSDNQPGVHIQVFEGERTMTKDCHLLGTFDLSGIPPAPRG 473          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.957e-76
Identity = 141/221 (63.80%), Postives = 171/221 (77.38%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+  NPRA+RRLRTA ERAKRTLSS+AQ  IE+DSL+EGIDFYT+I+RARFE+L  DLFRKC+EPVE+ + DAK+DK  +  VVLVGGSTRIPK+Q+LL++F NGKEL KSINPDE           ILSG+ +++++D             ETAGGVM+ +I RNT +PTK  Q F+TYSDNQPGV IQV+EGER  T+DNN LG+FELSGIPPAPRG
Sbjct:  250 KKDMRTNPRAIRRLRTAAERAKRTLSSSAQANIEVDSLFEGIDFYTSISRARFEDLCSDLFRKCLEPVERAILDAKIDKKKIDTVVLVGGSTRIPKIQKLLQEFLNGKELNKSINPDEAVAYGAAVQAAILSGDKSDEIKDVLLVDVAPLSLGIETAGGVMSKIIERNTRVPTKASQTFTTYSDNQPGVSIQVFEGERAMTKDNNRLGQFELSGIPPAPRG 470          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 6.749e-76
Identity = 141/221 (63.80%), Postives = 168/221 (76.02%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            K DI GN RALRRLRTACERAKRTLSS+ + ++EID+L+EGIDFY+ I+RARFEELNMDLFR  M+PVE+ L DAKMDK ++HDVVLVGGSTRIPK+Q+LL+D F GK+L  SINPDE           IL+G G+ ++QD             ETAGGVMT L+ RN  IP K++Q+F+TYSDNQ  V IQVYEGER  T+DNNLLG F L+GIPPAPRG
Sbjct:  251 KSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNNLLGTFNLTGIPPAPRG 471          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 280.796 bits (717), Expect = 4.375e-75
Identity = 143/221 (64.71%), Postives = 164/221 (74.21%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LL+DFF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K+ + FSTY+DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRG
Sbjct:  248 KKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 4.375e-75
Identity = 143/221 (64.71%), Postives = 164/221 (74.21%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LL+DFF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K+ + FSTY+DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRG
Sbjct:  248 KKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of FC930211 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 5.713e-75
Identity = 143/221 (64.71%), Postives = 164/221 (74.21%), Query Frame = 2
Query:    2 KKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLRDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRG 664
            KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LL++FF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRG
Sbjct:  248 KKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
The following BLAST results are available for this feature:
BLAST of FC930211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_PLACB1.606e-7766.67Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP74_ANOAL4.674e-7766.06Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP72_ANOAL1.360e-7665.61Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL1.360e-7665.61Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP74_TRYBB3.030e-7668.18Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP74_PARLI3.957e-7663.80Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP7B_DROME6.749e-7663.80Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP71_DROME4.375e-7564.71Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME4.375e-7564.71Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP75_DROME5.713e-7564.71Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionC34005A01EF PostHarvC1 Citrus clementina cDNA clone C34005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930211 ID=FC930211; Name=FC930211; organism=Citrus clementina; type=EST; length=665bp
CAAGAAGGATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTG
CCTGTGAAAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATT
GAGATTGATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAG
GGCTAGATTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGC
CAGTGGAGAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCAT
GATGTGGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACT
GTTGCGGGACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTG
ATGAAGCGGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGT
GAGGGTAATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCT
ATCGCTGGGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAA
GGAACACCACTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTCT
GACAACCAGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAG
AACCCGTGACAACAACTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTC
CTGCTCCAAGAGGGG
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