FC930212

Overview
NameFC930212
Unique NameFC930212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15118 contig Ccv1_Contig15118:1..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.436e-47
Identity = 89/162 (54.94%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  145 EQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRL-EGKYSAYDHPKTAKNEWVICRVFQKSGGGKK 627
            + ++LPPGFRFHPTDEEL+ HYL  +      +   I E+DL K +PW LPR A  GEKEWYFF  RDRKYP G R NRA  +GYWKATG DK +   K  V +KK LVFY G+APKG+KTNW+MHEYRL +   SA        ++WV+CR++ K GG +K
Sbjct:    5 QDLQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKP-VAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEK 165          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46
Identity = 87/161 (54.04%), Postives = 107/161 (66.46%), Query Frame = 1
Query:  148 QIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEG--KYSAYDHPKTAKNEWVICRVFQKSGGGK 624
            Q  LPPGFRFHPTDEELI +YL  +          I EVD+ K +PW LP + + GE EWYFF  R+RKYP G+R NRA  +GYWKATG DK I+   + VG+KK LVFYKGR PKG KT+W+MHEYRL    K S   +     +EWV+CR+++K G  K
Sbjct:    6 QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASK 166          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.826e-46
Identity = 91/162 (56.17%), Postives = 114/162 (70.37%), Query Frame = 1
Query:  157 LPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEK--EWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTA--KNEWVICRVFQKSGGGKKH 630
            L PGFRFHPTDEEL+ +YL  KV +  F   AI   D+ K EPWDLP ++K+  +  EWYFF + D+KY  G +TNRATE GYWK TGKD+EI     +VGMKKTLV++KGRAP+G++TNWVMHEYRL    S  D  K    +  +V+CR+FQKSG G K+
Sbjct:    9 LAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRL----SDEDLKKAGVPQEAYVLCRIFQKSGTGPKN 166          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.826e-46
Identity = 90/175 (51.43%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  115 LAGMEKYDDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYK--AKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAK--NEWVICRVFQKSGGGKK 627
            + G  + D + ++ LPPGFRFHPTDEEL+ HYL  KV         I EVDL K +PWDLP +A  G KEWYFF  RDRKYP G R NRA   GYWKATG DK +    +   VG+KK LVFY G+AP+G KT+W+MHEYRL     A    K ++  +EWV+CR++ K    +K
Sbjct:    7 VGGSGRRDAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.826e-46
Identity = 88/163 (53.99%), Postives = 110/163 (67.48%), Query Frame = 1
Query:  145 EQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTA--KNEWVICRVFQKSGGGKK 627
            E ++LPPGFRFHPTDEEL+ HYL  K      +   I E+DL K +PW+LP  A  GEKEWYFF  RDRKYP G R NR+  +GYWKATG DK I   K  VG+KK LVFY G+APKG+KTNW+MHEYRL     +    K +   ++WV+CR++ K G  ++
Sbjct:    3 ELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKP-VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45
Identity = 89/163 (54.60%), Postives = 105/163 (64.42%), Query Frame = 1
Query:  151 IELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEG--------KYSAYDHPKTAKNEWVICRVFQKSG 615
            ++LPPGFRFHPTD+EL+ +YL  K      +A  I EVDL K  PWDLP RA  GEKEWYFF  RDRKYP G R NRA   GYWKATG DK +   +A V +KK LVFY G+ PKG KTNW+MHEYRL          K S   H     ++WV+CR++ K G
Sbjct:    7 LQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRA-VAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKG 168          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.090e-45
Identity = 85/169 (50.30%), Postives = 113/169 (66.86%), Query Frame = 1
Query:  148 QIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMG---EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKY---SAYDHPKTAK--------NEWVICRVFQKS 612
            Q ++PPGFRFHPT+EEL+ +YL  K+ +       I ++DLNK EPWD+    K+G   + +WYF+  +D+KYPTG RTNRAT  G+WKATG+DK IY     +GM+KTLVFYKGRAP GQK++W+MHEYRL+      S  DH    +          WV+CRVF+K+
Sbjct:    8 QSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKN 176          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.187e-44
Identity = 83/167 (49.70%), Postives = 104/167 (62.28%), Query Frame = 1
Query:  136 DDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLE---GKYSAYDHPKTAKNEWVICRVFQKSGGGKK 627
            D +  + LPPGFRFHPTDEEL+ HYL P+          I E+DL + +PWDLP RA  G +EWYFF  RDRKYP G R NRA  +GYWKATG DK +       G+KK LVFY G+ P+G KT W+MHEYRL    G  +A        ++WV+CR++ K    +K
Sbjct:   10 DAEADLNLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEK 176          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.550e-44
Identity = 86/168 (51.19%), Postives = 115/168 (68.45%), Query Frame = 1
Query:  148 QIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMG---EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLEGKYSAYDH----------PKTAKNE-WVICRVFQK 609
            Q ++PPGFRFHPT+EEL+ +YL  KV         I +VDLNK EPWD+    K+G   + +WYFF  +D+KYPTG RTNRAT AG+WKATG+DK IY     +GM+KTLVFYKGRAP GQK++W+MHEYRL+    + +            + +++E WV+CR+F+K
Sbjct:   13 QSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKK 180          
BLAST of FC930212 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.550e-44
Identity = 87/165 (52.73%), Postives = 111/165 (67.27%), Query Frame = 1
Query:  148 QIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMG---EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYKGRAPKGQKTNWVMHEYRLE------GKYSAYDHPKTAKNE--WVICRVFQK 609
            Q ++PPGFRFHPT+EEL+ +YL  KV         I EVDLNK EPWD+    ++G   + +WYFF  +D+KYPTG RTNRAT AG+WKATG+DK I      +G++KTLVFYKGRAP GQK++W+MHEYRL+      G          + NE  WV+CRVF+K
Sbjct:   13 QSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRK 177          
The following BLAST results are available for this feature:
BLAST of FC930212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC48_ORYSJ7.436e-4754.94NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC29_ARATH1.268e-4654.04NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC78_ARATH2.826e-4656.17NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC68_ORYSJ2.826e-4651.43NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC2_ARATH2.826e-4653.99NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC71_ORYSJ1.832e-4554.60NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC66_ARATH9.090e-4550.30NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC67_ORYSJ1.187e-4449.70NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC43_ARATH1.550e-4451.19NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC12_ARATH1.550e-4452.73NAC domain-containing protein 12 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC34005A02EF PostHarvC1 Citrus clementina cDNA clone C34005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930212 ID=FC930212; Name=FC930212; organism=Citrus clementina; type=EST; length=707bp
GTATTTAATTAGTTATACTCTTCACAAAACTTCCCTTTTCTCTTAAAGCC
TCATTATAAACAAGCTTTTCACTTCACAACTATTCTTCAGTTAAGCACTA
GTCATTCTTAGCTTCTTGCAGGAATGGAGAAATATGACGATCAAGAACAG
ATTGAATTGCCTCCAGGATTTCGGTTCCATCCCACGGATGAAGAGCTTAT
AACTCATTACTTAACACCAAAGGTTTTTGATGGTTGTTTTTCAGCTAGAG
CTATCGGTGAAGTTGATTTGAACAAGTGTGAGCCCTGGGATTTGCCTCGG
AGAGCTAAAATGGGTGAAAAGGAATGGTATTTTTTTTGTGTTAGGGACAG
AAAGTACCCAACTGGATTGAGAACAAATAGAGCTACTGAAGCAGGATACT
GGAAAGCCACAGGCAAAGATAAGGAGATTTACAAAGCAAAAGCACTTGTG
GGGATGAAGAAAACTTTGGTTTTTTACAAAGGAAGAGCCCCGAAAGGTCA
AAAAACCAACTGGGTCATGCATGAATATCGTTTAGAAGGCAAATATTCTG
CCTACGATCACCCCAAAACAGCCAAAAATGAGTGGGTGATTTGTAGGGTG
TTTCAAAAGAGTGGTGGAGGAAAGAAACACATATTCAAGGGATGGTGAAA
TTAGGCTCATTCGGGAACGGCATGGGCTCTTCTGCGTTGCCTCCATTGAT
GGATTCA
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